RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 CHRNA2Q15822 529 aa16.26■□□□□ 0.19
PCNA-201ENST00000379143 UNC5CLQ8IV45 518 aa16.26■□□□□ 0.19
PCNA-201ENST00000379143 BTG4Q9NY30 223 aa16.26■□□□□ 0.19
PCNA-201ENST00000379143 LMO7Q8WWI1 1683 aa16.26■□□□□ 0.19
PCNA-201ENST00000379143 LTN1O94822 1766 aa16.26■□□□□ 0.19
PCNA-201ENST00000379143 BCL9LQ86UU0 1499 aa16.25■□□□□ 0.19
PCNA-201ENST00000379143 MORC1Q86VD1 984 aa16.25■□□□□ 0.19
PCNA-201ENST00000379143 ZBTB7CA1YPR0 619 aa16.24■□□□□ 0.19
PCNA-201ENST00000379143 DDX10Q13206 875 aaKnown RBP16.24■□□□□ 0.19
PCNA-201ENST00000379143 TRPC5Q9UL62 973 aaPredicted RBP16.24■□□□□ 0.19
PCNA-201ENST00000379143 COL18A1P39060 1754 aa16.24■□□□□ 0.19
PCNA-201ENST00000379143 KIF24Q5T7B8 1368 aa16.23■□□□□ 0.19
PCNA-201ENST00000379143 NRAPQ86VF7 1730 aa16.23■□□□□ 0.19
PCNA-201ENST00000379143 CAMTA1Q9Y6Y1 1673 aa16.22■□□□□ 0.19
PCNA-201ENST00000379143 MAP3K19Q56UN5 1328 aa16.22■□□□□ 0.19
PCNA-201ENST00000379143 RTL1A6NKG5 1358 aa16.22■□□□□ 0.19
PCNA-201ENST00000379143 BLMP54132 1417 aaPredicted RBP16.22■□□□□ 0.19
PCNA-201ENST00000379143 AMPHP49418 695 aa16.21■□□□□ 0.19
PCNA-201ENST00000379143 EVA1CP58658 441 aa16.21■□□□□ 0.19
PCNA-201ENST00000379143 ATRNO75882 1429 aa16.21■□□□□ 0.19
PCNA-201ENST00000379143 VPS72Q15906 364 aa16.2■□□□□ 0.18
PCNA-201ENST00000379143 CC2D1BQ5T0F9 858 aaKnown RBP16.2■□□□□ 0.18
PCNA-201ENST00000379143 IP6K1Q92551 441 aa16.2■□□□□ 0.18
PCNA-201ENST00000379143 COL5A2P05997 1499 aaPredicted RBP16.2■□□□□ 0.18
PCNA-201ENST00000379143 RRS1Q15050 365 aaKnown RBP16.19■□□□□ 0.18
PCNA-201ENST00000379143 AXIN2Q9Y2T1 843 aa16.19■□□□□ 0.18
PCNA-201ENST00000379143 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
PCNA-201ENST00000379143 FLT4P35916 1363 aa16.19■□□□□ 0.18
PCNA-201ENST00000379143 FBLN1P23142 703 aa16.19■□□□□ 0.18
PCNA-201ENST00000379143 TNNT2P45379 298 aaPredicted RBP16.19■□□□□ 0.18
PCNA-201ENST00000379143 STRN4Q9NRL3 753 aa16.19■□□□□ 0.18
PCNA-201ENST00000379143 HOXC9P31274 260 aa16.18■□□□□ 0.18
PCNA-201ENST00000379143 GJD4Q96KN9 370 aaPredicted RBP16.18■□□□□ 0.18
PCNA-201ENST00000379143 POLKQ9UBT6 870 aa16.18■□□□□ 0.18
PCNA-201ENST00000379143 CCDC9Q9Y3X0 531 aaKnown RBP16.18■□□□□ 0.18
PCNA-201ENST00000379143 RGPD5Q99666 1765 aa16.17■□□□□ 0.18
PCNA-201ENST00000379143 ERBB3P21860 1342 aa16.17■□□□□ 0.18
PCNA-201ENST00000379143 WDR17Q8IZU2 1322 aa16.17■□□□□ 0.18
PCNA-201ENST00000379143 CRB1P82279 1406 aa16.16■□□□□ 0.18
PCNA-201ENST00000379143 SMG6Q86US8 1419 aaKnown RBP16.16■□□□□ 0.18
PCNA-201ENST00000379143 INSRP06213 1382 aa16.16■□□□□ 0.18
PCNA-201ENST00000379143 CSB-PGBD3P0DP91 1061 aa16.16■□□□□ 0.18
PCNA-201ENST00000379143 EMILIN1Q9Y6C2 1016 aa16.16■□□□□ 0.18
PCNA-201ENST00000379143 FAM208AQ9UK61 1670 aaKnown RBP16.15■□□□□ 0.18
PCNA-201ENST00000379143 SPATA31A5Q5VU36 1347 aa16.15■□□□□ 0.18
PCNA-201ENST00000379143 SPATA31A7Q8IWB4 1347 aa16.15■□□□□ 0.18
PCNA-201ENST00000379143 PPM1GO15355 546 aaPredicted RBP16.15■□□□□ 0.18
PCNA-201ENST00000379143 CNGB1Q14028 1251 aaPredicted RBP16.15■□□□□ 0.18
PCNA-201ENST00000379143 LARP1Q6PKG0 1096 aaKnown RBP16.15■□□□□ 0.18
PCNA-201ENST00000379143 ANKRD24Q8TF21 1146 aa16.15■□□□□ 0.18
PCNA-201ENST00000379143 PEAK1Q9H792 1746 aa16.15■□□□□ 0.18
PCNA-201ENST00000379143 TOM1L2Q6ZVM7 507 aa16.14■□□□□ 0.17
PCNA-201ENST00000379143 THRAP3Q9Y2W1 955 aaKnown RBP16.14■□□□□ 0.17
PCNA-201ENST00000379143 SPATA31A1Q5TZJ5 1347 aa16.13■□□□□ 0.17
PCNA-201ENST00000379143 GLI3P10071 1580 aa16.12■□□□□ 0.17
PCNA-201ENST00000379143 HSP90AB2PQ58FF8 381 aa16.12■□□□□ 0.17
PCNA-201ENST00000379143 CARD10Q9BWT7 1032 aa16.12■□□□□ 0.17
PCNA-201ENST00000379143 PARD3Q8TEW0 1356 aa16.11■□□□□ 0.17
PCNA-201ENST00000379143 RALBP1Q15311 655 aa16.11■□□□□ 0.17
PCNA-201ENST00000379143 TCP11L2Q8N4U5 519 aa16.11■□□□□ 0.17
PCNA-201ENST00000379143 BRWD3Q6RI45 1802 aa16.11■□□□□ 0.17
PCNA-201ENST00000379143 ONECUT3O60422 494 aaPredicted RBP16.1■□□□□ 0.17
PCNA-201ENST00000379143 MTHFSP49914 203 aa16.1■□□□□ 0.17
PCNA-201ENST00000379143 BARGINQ6ZT62 677 aa16.1■□□□□ 0.17
PCNA-201ENST00000379143 LTV1Q96GA3 475 aaPredicted RBP16.1■□□□□ 0.17
PCNA-201ENST00000379143 NLRP2Q9NX02 1062 aa16.1■□□□□ 0.17
PCNA-201ENST00000379143 USP35Q9P2H5 1018 aa16.1■□□□□ 0.17
PCNA-201ENST00000379143 CCDC125Q86Z20 511 aa16.09■□□□□ 0.17
PCNA-201ENST00000379143 FAM98CQ17RN3 349 aaKnown RBP16.08■□□□□ 0.16
PCNA-201ENST00000379143 PPP2R1AP30153 589 aa16.07■□□□□ 0.16
PCNA-201ENST00000379143 CFAP53Q96M91 514 aa16.07■□□□□ 0.16
PCNA-201ENST00000379143 CDCA7Q9BWT1 371 aaPredicted RBP16.07■□□□□ 0.16
PCNA-201ENST00000379143 A0A0G2JS52 829 aa16.05■□□□□ 0.16
PCNA-201ENST00000379143 MYT1Q01538 1121 aa16.05■□□□□ 0.16
PCNA-201ENST00000379143 EIF4A2Q14240 407 aaKnown RBP16.05■□□□□ 0.16
PCNA-201ENST00000379143 THSD7AQ9UPZ6 1657 aa16.05■□□□□ 0.16
PCNA-201ENST00000379143 WNK3Q9BYP7 1800 aa16.05■□□□□ 0.16
PCNA-201ENST00000379143 NBPF6Q5VWK0 638 aa16.04■□□□□ 0.16
PCNA-201ENST00000379143 SEPT12Q8IYM1 358 aa16.04■□□□□ 0.16
PCNA-201ENST00000379143 NBPF4Q96M43 638 aa16.04■□□□□ 0.16
PCNA-201ENST00000379143 PRKRIP1Q9H875 184 aaPredicted RBP16.04■□□□□ 0.16
PCNA-201ENST00000379143 MYBBP1AQ9BQG0 1328 aaKnown RBP16.04■□□□□ 0.16
PCNA-201ENST00000379143 RGPD2P0DJD1 1756 aa16.04■□□□□ 0.16
PCNA-201ENST00000379143 DIAPH1O60610 1272 aaKnown RBP16.03■□□□□ 0.16
PCNA-201ENST00000379143 PARP4Q9UKK3 1724 aaKnown RBP16.03■□□□□ 0.16
PCNA-201ENST00000379143 LRP5O75197 1615 aa16.03■□□□□ 0.16
PCNA-201ENST00000379143 NCAPD2Q15021 1401 aa16.02■□□□□ 0.16
PCNA-201ENST00000379143 IL2RBP14784 551 aa16.02■□□□□ 0.16
PCNA-201ENST00000379143 EYA1Q99502 592 aa16.02■□□□□ 0.16
PCNA-201ENST00000379143 DISP2A7MBM2 1401 aa16.01■□□□□ 0.15
PCNA-201ENST00000379143 ANP32CO43423 234 aa16.01■□□□□ 0.15
PCNA-201ENST00000379143 IL13P35225 146 aa16.01■□□□□ 0.15
PCNA-201ENST00000379143 IGSF1Q8N6C5 1336 aa16.01■□□□□ 0.15
PCNA-201ENST00000379143 COL3A1P02461 1466 aaPredicted RBP16■□□□□ 0.15
PCNA-201ENST00000379143 DDB1Q16531 1140 aa16■□□□□ 0.15
PCNA-201ENST00000379143 RAPGEF4Q8WZA2 1011 aa16■□□□□ 0.15
PCNA-201ENST00000379143 RGPD1P0DJD0 1748 aa16■□□□□ 0.15
PCNA-201ENST00000379143 USHBP1Q8N6Y0 703 aa15.99■□□□□ 0.15
PCNA-201ENST00000379143 NUDCQ9Y266 331 aa15.99■□□□□ 0.15
PCNA-201ENST00000379143 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms