RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 RGS3P49796 1198 aa27.48■■□□□ 1.99
CNTFR-202ENST00000378980 DZIP1LQ8IYY4 767 aaKnown RBP27.48■■□□□ 1.99
CNTFR-202ENST00000378980 PMFBP1Q8TBY8 1022 aa27.48■■□□□ 1.99
CNTFR-202ENST00000378980 CEP170BQ9Y4F5 1589 aaPredicted RBP27.48■■□□□ 1.99
CNTFR-202ENST00000378980 RGPD8O14715 1765 aaPredicted RBP27.48■■□□□ 1.99
CNTFR-202ENST00000378980 FAM161AQ3B820 660 aa27.48■■□□□ 1.99
CNTFR-202ENST00000378980 FTSJ3Q8IY81 847 aaKnown RBP27.47■■□□□ 1.99
CNTFR-202ENST00000378980 PCDHB15Q9Y5E8 787 aa27.47■■□□□ 1.99
CNTFR-202ENST00000378980 CALD1Q05682 793 aaKnown RBP27.46■■□□□ 1.99
CNTFR-202ENST00000378980 C8orf34Q49A92 452 aa27.45■■□□□ 1.99
CNTFR-202ENST00000378980 VIRMAQ69YN4 1812 aaKnown RBP27.45■■□□□ 1.99
CNTFR-202ENST00000378980 PEAK1Q9H792 1746 aa27.45■■□□□ 1.98
CNTFR-202ENST00000378980 TRIM27P14373 513 aa27.45■■□□□ 1.98
CNTFR-202ENST00000378980 ZBTB47Q9UFB7 747 aaPredicted RBP27.45■■□□□ 1.98
CNTFR-202ENST00000378980 USP31Q70CQ4 1352 aa27.45■■□□□ 1.98
CNTFR-202ENST00000378980 ALDH1L2Q3SY69 923 aa27.43■■□□□ 1.98
CNTFR-202ENST00000378980 ATF7IPQ6VMQ6 1270 aa27.43■■□□□ 1.98
CNTFR-202ENST00000378980 KIF16BQ96L93 1317 aa27.42■■□□□ 1.98
CNTFR-202ENST00000378980 TTC21AQ8NDW8 1320 aa27.42■■□□□ 1.98
CNTFR-202ENST00000378980 LMOD3Q0VAK6 560 aa27.41■■□□□ 1.98
CNTFR-202ENST00000378980 ZNF428Q96B54 188 aa27.41■■□□□ 1.98
CNTFR-202ENST00000378980 IFT57Q9NWB7 429 aa27.41■■□□□ 1.98
CNTFR-202ENST00000378980 NOB1Q9ULX3 412 aaKnown RBP27.41■■□□□ 1.98
CNTFR-202ENST00000378980 RGPD1P0DJD0 1748 aa27.41■■□□□ 1.98
CNTFR-202ENST00000378980 EIF4A2Q14240 407 aaKnown RBP27.4■■□□□ 1.98
CNTFR-202ENST00000378980 THUMPD2Q9BTF0 503 aaKnown RBP27.4■■□□□ 1.98
CNTFR-202ENST00000378980 PIK3R4Q99570 1358 aa27.4■■□□□ 1.98
CNTFR-202ENST00000378980 LAS1LQ9Y4W2 734 aaKnown RBP27.4■■□□□ 1.98
CNTFR-202ENST00000378980 GNAI1P63096 354 aa27.39■■□□□ 1.98
CNTFR-202ENST00000378980 FMN2Q9NZ56 1722 aa27.39■■□□□ 1.98
CNTFR-202ENST00000378980 ZNF853P0CG23 659 aa27.39■■□□□ 1.97
CNTFR-202ENST00000378980 RWDD1Q9H446 243 aaPredicted RBP27.37■■□□□ 1.97
CNTFR-202ENST00000378980 ANKARQ7Z5J8 1434 aa27.37■■□□□ 1.97
CNTFR-202ENST00000378980 BRPF1P55201 1214 aaPredicted RBP27.37■■□□□ 1.97
CNTFR-202ENST00000378980 DDX19BQ9UMR2 479 aa27.37■■□□□ 1.97
CNTFR-202ENST00000378980 IPO8O15397 1037 aaKnown RBP27.36■■□□□ 1.97
CNTFR-202ENST00000378980 PIK3C2AO00443 1686 aa27.36■■□□□ 1.97
CNTFR-202ENST00000378980 ZNF142P52746 1687 aaPredicted RBP27.36■■□□□ 1.97
CNTFR-202ENST00000378980 KCNA6P17658 529 aa27.34■■□□□ 1.97
CNTFR-202ENST00000378980 AEBP1Q8IUX7 1158 aa27.34■■□□□ 1.97
CNTFR-202ENST00000378980 ITPRIPQ8IWB1 547 aa27.34■■□□□ 1.97
CNTFR-202ENST00000378980 NGDNQ8NEJ9 315 aaKnown RBP27.34■■□□□ 1.97
CNTFR-202ENST00000378980 MBIPQ9NS73 344 aa27.34■■□□□ 1.97
CNTFR-202ENST00000378980 VAMP4O75379 141 aa27.32■■□□□ 1.96
CNTFR-202ENST00000378980 SULT6B1Q6IMI4 303 aa27.32■■□□□ 1.96
CNTFR-202ENST00000378980 CFAP44Q96MT7 982 aa27.32■■□□□ 1.96
CNTFR-202ENST00000378980 HSP90AB2PQ58FF8 381 aa27.32■■□□□ 1.96
CNTFR-202ENST00000378980 TMEM57Q8N5G2 664 aa27.32■■□□□ 1.96
CNTFR-202ENST00000378980 CHD2O14647 1828 aaKnown RBP27.32■■□□□ 1.96
CNTFR-202ENST00000378980 DDRGK1Q96HY6 314 aa27.3■■□□□ 1.96
CNTFR-202ENST00000378980 FAM83GA6ND36 823 aa27.29■■□□□ 1.96
CNTFR-202ENST00000378980 TSPYL6Q8N831 410 aa27.29■■□□□ 1.96
CNTFR-202ENST00000378980 PDZRN3Q9UPQ7 1066 aa27.29■■□□□ 1.96
CNTFR-202ENST00000378980 MAP3K19Q56UN5 1328 aa27.29■■□□□ 1.96
CNTFR-202ENST00000378980 USP54Q70EL1 1684 aa27.28■■□□□ 1.96
CNTFR-202ENST00000378980 SBNO1A3KN83 1393 aa27.28■■□□□ 1.96
CNTFR-202ENST00000378980 MARF1Q9Y4F3 1742 aaKnown RBP27.28■■□□□ 1.96
CNTFR-202ENST00000378980 MRPL50Q8N5N7 158 aaKnown RBP27.28■■□□□ 1.96
CNTFR-202ENST00000378980 ARHGEF10O15013 1369 aa27.27■■□□□ 1.96
CNTFR-202ENST00000378980 SOX12O15370 315 aa27.27■■□□□ 1.96
CNTFR-202ENST00000378980 HDAC1Q13547 482 aaPredicted RBP27.27■■□□□ 1.96
CNTFR-202ENST00000378980 FLT4P35916 1363 aa27.27■■□□□ 1.96
CNTFR-202ENST00000378980 ADAMTSL3P82987 1691 aa27.27■■□□□ 1.96
CNTFR-202ENST00000378980 ZBTB40Q9NUA8 1239 aa27.26■■□□□ 1.95
CNTFR-202ENST00000378980 DCTN1Q14203 1278 aa27.25■■□□□ 1.95
CNTFR-202ENST00000378980 ARHGAP45Q92619 1136 aa27.25■■□□□ 1.95
CNTFR-202ENST00000378980 TWISTNBQ3B726 338 aaPredicted RBP27.25■■□□□ 1.95
CNTFR-202ENST00000378980 ANKLE2Q86XL3 938 aa27.24■■□□□ 1.95
CNTFR-202ENST00000378980 C8orf58Q8NAV2 365 aa27.23■■□□□ 1.95
CNTFR-202ENST00000378980 ELL2O00472 640 aaPredicted RBP27.21■■□□□ 1.95
CNTFR-202ENST00000378980 SETD1BQ9UPS6 1966 aaKnown RBP27.21■■□□□ 1.95
CNTFR-202ENST00000378980 KDRP35968 1356 aa27.2■■□□□ 1.94
CNTFR-202ENST00000378980 NLRP6P59044 892 aa27.18■■□□□ 1.94
CNTFR-202ENST00000378980 AMPHP49418 695 aa27.17■■□□□ 1.94
CNTFR-202ENST00000378980 ABCC4O15439 1325 aa27.17■■□□□ 1.94
CNTFR-202ENST00000378980 KIF24Q5T7B8 1368 aa27.17■■□□□ 1.94
CNTFR-202ENST00000378980 SMC5Q8IY18 1101 aa27.17■■□□□ 1.94
CNTFR-202ENST00000378980 IGSF1Q8N6C5 1336 aa27.16■■□□□ 1.94
CNTFR-202ENST00000378980 CHL1O00533 1208 aa27.16■■□□□ 1.94
CNTFR-202ENST00000378980 MCM10Q7L590 875 aa27.15■■□□□ 1.94
CNTFR-202ENST00000378980 CHMP4BQ9H444 224 aaKnown RBP27.14■■□□□ 1.94
CNTFR-202ENST00000378980 CRB1P82279 1406 aa27.14■■□□□ 1.93
CNTFR-202ENST00000378980 USP19O94966 1318 aa27.13■■□□□ 1.93
CNTFR-202ENST00000378980 ZBTB7BO15156 539 aaPredicted RBP27.13■■□□□ 1.93
CNTFR-202ENST00000378980 EYA1Q99502 592 aa27.13■■□□□ 1.93
CNTFR-202ENST00000378980 KIAA0232Q92628 1395 aa27.13■■□□□ 1.93
CNTFR-202ENST00000378980 NBR1Q14596 966 aa27.12■■□□□ 1.93
CNTFR-202ENST00000378980 API5Q9BZZ5 524 aaKnown RBP27.11■■□□□ 1.93
CNTFR-202ENST00000378980 PHF8Q9UPP1 1060 aa27.11■■□□□ 1.93
CNTFR-202ENST00000378980 ADGRL3Q9HAR2 1447 aa27.11■■□□□ 1.93
CNTFR-202ENST00000378980 SEC24BO95487 1268 aa27.1■■□□□ 1.93
CNTFR-202ENST00000378980 HAP1P54257 671 aaPredicted RBP27.1■■□□□ 1.93
CNTFR-202ENST00000378980 MTHFSDQ2M296 383 aaKnown RBP27.1■■□□□ 1.93
CNTFR-202ENST00000378980 ABTB2Q8N961 1025 aa27.1■■□□□ 1.93
CNTFR-202ENST00000378980 NUTM2GQ5VZR2 741 aa27.1■■□□□ 1.93
CNTFR-202ENST00000378980 HOXC9P31274 260 aa27.09■■□□□ 1.93
CNTFR-202ENST00000378980 NWD1Q149M9 1564 aa27.09■■□□□ 1.93
CNTFR-202ENST00000378980 LTN1O94822 1766 aa27.08■■□□□ 1.93
CNTFR-202ENST00000378980 FOXO3O43524 673 aa27.07■■□□□ 1.92
CNTFR-202ENST00000378980 NPHP4O75161 1426 aaPredicted RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms