RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 NACAP1Q9BZK3 213 aa13.23□□□□□ -0.29
RAD50-201ENST00000378823 NOB1Q9ULX3 412 aaKnown RBP13.23□□□□□ -0.29
RAD50-201ENST00000378823 CDKL5O76039 1030 aa13.23□□□□□ -0.29
RAD50-201ENST00000378823 CCT4P50991 539 aaKnown RBP13.23□□□□□ -0.29
RAD50-201ENST00000378823 LARP1BQ659C4 914 aaKnown RBP13.23□□□□□ -0.29
RAD50-201ENST00000378823 TAX1BP1Q86VP1 789 aa13.23□□□□□ -0.29
RAD50-201ENST00000378823 TANGO6Q9C0B7 1094 aa13.23□□□□□ -0.29
RAD50-201ENST00000378823 TAF3Q5VWG9 929 aa13.23□□□□□ -0.29
RAD50-201ENST00000378823 GGNBP2Q9H3C7 697 aa13.23□□□□□ -0.29
RAD50-201ENST00000378823 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
RAD50-201ENST00000378823 ABTB2Q8N961 1025 aa13.22□□□□□ -0.29
RAD50-201ENST00000378823 C1orf115Q9H7X2 142 aa13.22□□□□□ -0.29
RAD50-201ENST00000378823 PDZRN3Q9UPQ7 1066 aa13.22□□□□□ -0.29
RAD50-201ENST00000378823 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
RAD50-201ENST00000378823 ATP2B2Q01814 1243 aa13.22□□□□□ -0.29
RAD50-201ENST00000378823 ZHX3Q9H4I2 956 aa13.22□□□□□ -0.29
RAD50-201ENST00000378823 STK3Q13188 491 aa13.22□□□□□ -0.29
RAD50-201ENST00000378823 RRP9O43818 475 aaKnown RBP13.21□□□□□ -0.29
RAD50-201ENST00000378823 TWISTNBQ3B726 338 aaPredicted RBP13.21□□□□□ -0.29
RAD50-201ENST00000378823 CADPSQ9ULU8 1353 aa13.21□□□□□ -0.29
RAD50-201ENST00000378823 AKNAQ7Z591 1439 aa13.21□□□□□ -0.29
RAD50-201ENST00000378823 DESP17661 470 aa13.21□□□□□ -0.3
RAD50-201ENST00000378823 DYDC1Q8WWB3 177 aa13.21□□□□□ -0.3
RAD50-201ENST00000378823 NLRP6P59044 892 aa13.21□□□□□ -0.3
RAD50-201ENST00000378823 PKNOX2Q96KN3 472 aa13.21□□□□□ -0.3
RAD50-201ENST00000378823 SETD1BQ9UPS6 1966 aaKnown RBP13.2□□□□□ -0.3
RAD50-201ENST00000378823 FAM193AP78312 1265 aa13.2□□□□□ -0.3
RAD50-201ENST00000378823 KIAA1328Q86T90 577 aa13.2□□□□□ -0.3
RAD50-201ENST00000378823 SPATA32Q96LK8 384 aa13.2□□□□□ -0.3
RAD50-201ENST00000378823 GPRASP1Q5JY77 1395 aa13.2□□□□□ -0.3
RAD50-201ENST00000378823 NUTM2GQ5VZR2 741 aa13.2□□□□□ -0.3
RAD50-201ENST00000378823 ZNF397Q8NF99 534 aaPredicted RBP13.2□□□□□ -0.3
RAD50-201ENST00000378823 LRRC9Q6ZRR7 1453 aa13.2□□□□□ -0.3
RAD50-201ENST00000378823 FANCD2Q9BXW9 1451 aa13.2□□□□□ -0.3
RAD50-201ENST00000378823 NOL7Q9UMY1 257 aaKnown RBP13.19□□□□□ -0.3
RAD50-201ENST00000378823 GAPVD1Q14C86 1478 aa13.19□□□□□ -0.3
RAD50-201ENST00000378823 PLEKHO1Q53GL0 409 aaPredicted RBP13.19□□□□□ -0.3
RAD50-201ENST00000378823 ZSCAN25Q6NSZ9 544 aa13.19□□□□□ -0.3
RAD50-201ENST00000378823 SMTNL1A8MU46 457 aa13.19□□□□□ -0.3
RAD50-201ENST00000378823 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
RAD50-201ENST00000378823 EPB41L2O43491 1005 aaKnown RBP13.19□□□□□ -0.3
RAD50-201ENST00000378823 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
RAD50-201ENST00000378823 BLOC1S2Q6QNY1 142 aa13.18□□□□□ -0.3
RAD50-201ENST00000378823 CEP57L1Q8IYX8 460 aa13.18□□□□□ -0.3
RAD50-201ENST00000378823 ANKRD50Q9ULJ7 1429 aa13.18□□□□□ -0.3
RAD50-201ENST00000378823 PRKAR2BP31323 418 aa13.18□□□□□ -0.3
RAD50-201ENST00000378823 CDCA7LQ96GN5 454 aa13.18□□□□□ -0.3
RAD50-201ENST00000378823 NUP62CLQ9H1M0 184 aa13.18□□□□□ -0.3
RAD50-201ENST00000378823 RUSC2Q8N2Y8 1516 aa13.18□□□□□ -0.3
RAD50-201ENST00000378823 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
RAD50-201ENST00000378823 HDGFL1Q5TGJ6 251 aa13.18□□□□□ -0.3
RAD50-201ENST00000378823 CCDC102AQ96A19 550 aa13.18□□□□□ -0.3
RAD50-201ENST00000378823 UPF3BQ9BZI7 483 aaKnown RBP13.18□□□□□ -0.3
RAD50-201ENST00000378823 CCDC57Q2TAC2 916 aa13.17□□□□□ -0.3
RAD50-201ENST00000378823 BACH2Q9BYV9 841 aa13.17□□□□□ -0.3
RAD50-201ENST00000378823 SEPT11Q9NVA2 429 aaKnown RBP13.17□□□□□ -0.3
RAD50-201ENST00000378823 CCDC148Q8NFR7 591 aa13.17□□□□□ -0.3
RAD50-201ENST00000378823 CHD1LQ86WJ1 897 aa13.17□□□□□ -0.3
RAD50-201ENST00000378823 SOGA3Q5TF21 947 aa13.17□□□□□ -0.3
RAD50-201ENST00000378823 ESPNB1AK53 854 aa13.17□□□□□ -0.3
RAD50-201ENST00000378823 KRT32Q14532 448 aa13.17□□□□□ -0.3
RAD50-201ENST00000378823 MAP9Q49MG5 647 aa13.17□□□□□ -0.3
RAD50-201ENST00000378823 CRACR2AQ9BSW2 395 aa13.17□□□□□ -0.3
RAD50-201ENST00000378823 CIZ1Q9ULV3 898 aaPredicted RBP13.17□□□□□ -0.3
RAD50-201ENST00000378823 FKBP4Q02790 459 aaKnown RBP eCLIP13.16□□□□□ -0.3
RAD50-201ENST00000378823 PDCL2Q8N4E4 241 aa13.16□□□□□ -0.3
RAD50-201ENST00000378823 JAKMIP3Q5VZ66 844 aa13.16□□□□□ -0.3
RAD50-201ENST00000378823 SIL1Q9H173 461 aa13.16□□□□□ -0.3
RAD50-201ENST00000378823 ARHGAP29Q52LW3 1261 aa13.16□□□□□ -0.3
RAD50-201ENST00000378823 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
RAD50-201ENST00000378823 SLC26A8Q96RN1 970 aa13.16□□□□□ -0.3
RAD50-201ENST00000378823 EXOSC9Q06265 439 aaKnown RBP13.16□□□□□ -0.3
RAD50-201ENST00000378823 NUP133Q8WUM0 1156 aa13.16□□□□□ -0.3
RAD50-201ENST00000378823 UBXN4Q92575 508 aa13.16□□□□□ -0.3
RAD50-201ENST00000378823 MPHOSPH8Q99549 860 aa13.16□□□□□ -0.3
RAD50-201ENST00000378823 FAM177BA6PVY3 158 aa13.16□□□□□ -0.3
RAD50-201ENST00000378823 KIF2AO00139 706 aaPredicted RBP13.15□□□□□ -0.3
RAD50-201ENST00000378823 PPP2R1AP30153 589 aa13.15□□□□□ -0.3
RAD50-201ENST00000378823 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
RAD50-201ENST00000378823 TRIM21P19474 475 aaKnown RBP13.15□□□□□ -0.3
RAD50-201ENST00000378823 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
RAD50-201ENST00000378823 IMMTQ16891 758 aaKnown RBP13.15□□□□□ -0.3
RAD50-201ENST00000378823 CCDC91Q7Z6B0 441 aa13.15□□□□□ -0.3
RAD50-201ENST00000378823 CEP131Q9UPN4 1083 aa13.15□□□□□ -0.3
RAD50-201ENST00000378823 ERICH4A6NGS2 130 aa13.15□□□□□ -0.3
RAD50-201ENST00000378823 CTNNA3Q9UI47 895 aa13.15□□□□□ -0.3
RAD50-201ENST00000378823 ERICH3Q5RHP9 1530 aa13.15□□□□□ -0.3
RAD50-201ENST00000378823 MCM3P25205 808 aa13.15□□□□□ -0.3
RAD50-201ENST00000378823 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
RAD50-201ENST00000378823 STK11IPQ8N1F8 1099 aa13.15□□□□□ -0.3
RAD50-201ENST00000378823 MPNDQ8N594 471 aa13.15□□□□□ -0.3
RAD50-201ENST00000378823 CFAP100Q494V2 611 aa13.15□□□□□ -0.31
RAD50-201ENST00000378823 MVPQ14764 893 aaKnown RBP13.14□□□□□ -0.31
RAD50-201ENST00000378823 TMEM132EQ6IEE7 984 aa13.14□□□□□ -0.31
RAD50-201ENST00000378823 FILIP1Q7Z7B0 1213 aa13.14□□□□□ -0.31
RAD50-201ENST00000378823 WASF1Q92558 559 aa13.14□□□□□ -0.31
RAD50-201ENST00000378823 MAP4K4O95819 1239 aaPredicted RBP13.14□□□□□ -0.31
RAD50-201ENST00000378823 UBAC1Q9BSL1 405 aa13.14□□□□□ -0.31
RAD50-201ENST00000378823 WDR63Q8IWG1 891 aa13.14□□□□□ -0.31
RAD50-201ENST00000378823 GOLGA6L10A0A0M3HER8 536 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms