RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 ASXL1Q8IXJ9 1541 aa25.83■■□□□ 1.73
SKI-201ENST00000378536 DUSP27Q5VZP5 1158 aa25.83■■□□□ 1.73
SKI-201ENST00000378536 CNTROBQ8N137 903 aa25.83■■□□□ 1.73
SKI-201ENST00000378536 CCDC34Q96HJ3 373 aa25.83■■□□□ 1.73
SKI-201ENST00000378536 PUS7Q96PZ0 661 aaKnown RBP25.83■■□□□ 1.72
SKI-201ENST00000378536 TRDNQ13061 729 aa25.82■■□□□ 1.72
SKI-201ENST00000378536 FOXD4L5Q5VV16 416 aaPredicted RBP25.81■■□□□ 1.72
SKI-201ENST00000378536 FOXD4L4Q8WXT5 416 aaPredicted RBP25.81■■□□□ 1.72
SKI-201ENST00000378536 FYB1O15117 783 aa25.81■■□□□ 1.72
SKI-201ENST00000378536 ADAMTS2O95450 1211 aa25.81■■□□□ 1.72
SKI-201ENST00000378536 ADGBQ8N7X0 1667 aa25.81■■□□□ 1.72
SKI-201ENST00000378536 ZFYVE16Q7Z3T8 1539 aa25.81■■□□□ 1.72
SKI-201ENST00000378536 AKAP17AQ02040 695 aaKnown RBP25.81■■□□□ 1.72
SKI-201ENST00000378536 DRC7Q8IY82 874 aa25.81■■□□□ 1.72
SKI-201ENST00000378536 TRIM34Q9BYJ4 488 aa25.8■■□□□ 1.72
SKI-201ENST00000378536 SLC4A3P48751 1232 aa25.8■■□□□ 1.72
SKI-201ENST00000378536 WASHC4Q2M389 1173 aa25.79■■□□□ 1.72
SKI-201ENST00000378536 CPLX2Q6PUV4 134 aaKnown RBP25.79■■□□□ 1.72
SKI-201ENST00000378536 TMOD3Q9NYL9 352 aa25.79■■□□□ 1.72
SKI-201ENST00000378536 FSD1Q9BTV5 496 aa25.78■■□□□ 1.72
SKI-201ENST00000378536 TESK2Q96S53 571 aa25.78■■□□□ 1.72
SKI-201ENST00000378536 YTHDC2Q9H6S0 1430 aaKnown RBP25.77■■□□□ 1.72
SKI-201ENST00000378536 C22orf23Q9BZE7 217 aa25.77■■□□□ 1.72
SKI-201ENST00000378536 AMER1Q5JTC6 1135 aaPredicted RBP25.77■■□□□ 1.72
SKI-201ENST00000378536 STARD3NLO95772 234 aa25.77■■□□□ 1.72
SKI-201ENST00000378536 ATP6V1DQ9Y5K8 247 aa25.77■■□□□ 1.72
SKI-201ENST00000378536 ALDH1L2Q3SY69 923 aa25.77■■□□□ 1.72
SKI-201ENST00000378536 CNNM1Q9NRU3 951 aa25.76■■□□□ 1.71
SKI-201ENST00000378536 NKTRP30414 1462 aaKnown RBP25.76■■□□□ 1.71
SKI-201ENST00000378536 MPRIPQ6WCQ1 1025 aa25.76■■□□□ 1.71
SKI-201ENST00000378536 NPHP3Q7Z494 1330 aa25.76■■□□□ 1.71
SKI-201ENST00000378536 NCKAP5LQ9HCH0 1330 aa25.76■■□□□ 1.71
SKI-201ENST00000378536 SF3A1Q15459 793 aaKnown RBP25.76■■□□□ 1.71
SKI-201ENST00000378536 RASSF8Q8NHQ8 419 aa25.76■■□□□ 1.71
SKI-201ENST00000378536 TBX22Q9Y458 520 aa25.76■■□□□ 1.71
SKI-201ENST00000378536 FANCIQ9NVI1 1328 aa25.75■■□□□ 1.71
SKI-201ENST00000378536 KLHL34Q8N239 644 aa25.75■■□□□ 1.71
SKI-201ENST00000378536 SF3B2Q13435 895 aaKnown RBP25.75■■□□□ 1.71
SKI-201ENST00000378536 LRRCC1Q9C099 1032 aa25.75■■□□□ 1.71
SKI-201ENST00000378536 ABCC1P33527 1531 aa25.75■■□□□ 1.71
SKI-201ENST00000378536 ANKRD24Q8TF21 1146 aa25.74■■□□□ 1.71
SKI-201ENST00000378536 DNAJC2Q99543 621 aaKnown RBP25.73■■□□□ 1.71
SKI-201ENST00000378536 DDX11L8A8MPP1 907 aa25.73■■□□□ 1.71
SKI-201ENST00000378536 RARSP54136 660 aaKnown RBP25.73■■□□□ 1.71
SKI-201ENST00000378536 TBC1D2BQ9UPU7 963 aa25.73■■□□□ 1.71
SKI-201ENST00000378536 CCDC27Q2M243 656 aa25.72■■□□□ 1.71
SKI-201ENST00000378536 TMEM57Q8N5G2 664 aa25.72■■□□□ 1.71
SKI-201ENST00000378536 MBD5Q9P267 1494 aa25.72■■□□□ 1.71
SKI-201ENST00000378536 PTCD1O75127 700 aaKnown RBP25.72■■□□□ 1.71
SKI-201ENST00000378536 GCC2Q8IWJ2 1684 aa25.72■■□□□ 1.71
SKI-201ENST00000378536 FBLN1P23142 703 aa25.72■■□□□ 1.71
SKI-201ENST00000378536 UHRF1BP1Q6BDS2 1440 aa25.72■■□□□ 1.71
SKI-201ENST00000378536 CPLX1O14810 134 aa25.72■■□□□ 1.71
SKI-201ENST00000378536 SSH1Q8WYL5 1049 aa25.72■■□□□ 1.71
SKI-201ENST00000378536 C19orf44Q9H6X5 657 aa25.71■■□□□ 1.71
SKI-201ENST00000378536 CLSTN1O94985 981 aa25.71■■□□□ 1.71
SKI-201ENST00000378536 HSPA2P54652 639 aa25.71■■□□□ 1.71
SKI-201ENST00000378536 SIL1Q9H173 461 aa25.71■■□□□ 1.71
SKI-201ENST00000378536 KCNA6P17658 529 aa25.7■■□□□ 1.71
SKI-201ENST00000378536 HIP1O00291 1037 aa25.7■■□□□ 1.7
SKI-201ENST00000378536 ERICH2A1L162 156 aa25.7■■□□□ 1.7
SKI-201ENST00000378536 CCDC158Q5M9N0 1113 aa25.7■■□□□ 1.7
SKI-201ENST00000378536 NGLY1Q96IV0 654 aa25.7■■□□□ 1.7
SKI-201ENST00000378536 ZCCHC11Q5TAX3 1644 aaKnown RBP25.7■■□□□ 1.7
SKI-201ENST00000378536 SRGAP3O43295 1099 aa25.7■■□□□ 1.7
SKI-201ENST00000378536 CCDC57Q2TAC2 916 aa25.7■■□□□ 1.7
SKI-201ENST00000378536 RPAP2Q8IXW5 612 aaPredicted RBP25.69■■□□□ 1.7
SKI-201ENST00000378536 MARCH6O60337 910 aa25.69■■□□□ 1.7
SKI-201ENST00000378536 SAMD9LQ8IVG5 1584 aa25.69■■□□□ 1.7
SKI-201ENST00000378536 TPM4P67936 248 aa25.68■■□□□ 1.7
SKI-201ENST00000378536 CHRNA2Q15822 529 aa25.68■■□□□ 1.7
SKI-201ENST00000378536 HSP90AB2PQ58FF8 381 aa25.68■■□□□ 1.7
SKI-201ENST00000378536 NFXL1Q6ZNB6 911 aa25.68■■□□□ 1.7
SKI-201ENST00000378536 RALYLQ86SE5 291 aaKnown RBP25.68■■□□□ 1.7
SKI-201ENST00000378536 TTC39AQ5SRH9 613 aa25.68■■□□□ 1.7
SKI-201ENST00000378536 IFNL2Q8IZJ0 200 aa25.68■■□□□ 1.7
SKI-201ENST00000378536 TRIM29Q14134 588 aa25.67■■□□□ 1.7
SKI-201ENST00000378536 TRPM2O94759 1503 aa25.67■■□□□ 1.7
SKI-201ENST00000378536 EXOC5O00471 708 aa25.67■■□□□ 1.7
SKI-201ENST00000378536 MCTP1Q6DN14 999 aa25.67■■□□□ 1.7
SKI-201ENST00000378536 NPATQ14207 1427 aa25.67■■□□□ 1.7
SKI-201ENST00000378536 YEATS2Q9ULM3 1422 aa25.67■■□□□ 1.7
SKI-201ENST00000378536 TTC37Q6PGP7 1564 aa25.67■■□□□ 1.7
SKI-201ENST00000378536 PHF14O94880 888 aa25.67■■□□□ 1.7
SKI-201ENST00000378536 RAD21O60216 631 aa25.66■■□□□ 1.7
SKI-201ENST00000378536 PARD3Q8TEW0 1356 aa25.66■■□□□ 1.7
SKI-201ENST00000378536 MSNP26038 577 aaKnown RBP25.66■■□□□ 1.7
SKI-201ENST00000378536 HMGB2P26583 209 aaKnown RBP25.66■■□□□ 1.7
SKI-201ENST00000378536 DEKP35659 375 aaKnown RBP25.65■■□□□ 1.7
SKI-201ENST00000378536 CHD1LQ86WJ1 897 aa25.65■■□□□ 1.7
SKI-201ENST00000378536 VPS53Q5VIR6 699 aa25.65■■□□□ 1.7
SKI-201ENST00000378536 LARP1Q6PKG0 1096 aaKnown RBP25.65■■□□□ 1.7
SKI-201ENST00000378536 GNL3LQ9NVN8 582 aaKnown RBP25.65■■□□□ 1.7
SKI-201ENST00000378536 MPHOSPH8Q99549 860 aa25.64■■□□□ 1.7
SKI-201ENST00000378536 GOLGA6L3A6NEY3 463 aa25.64■■□□□ 1.69
SKI-201ENST00000378536 TOM1O60784 492 aa25.64■■□□□ 1.69
SKI-201ENST00000378536 PSMA5P28066 241 aa25.63■■□□□ 1.69
SKI-201ENST00000378536 IL16Q14005 1332 aa25.63■■□□□ 1.69
SKI-201ENST00000378536 FOXD4L6Q3SYB3 417 aaPredicted RBP25.63■■□□□ 1.69
SKI-201ENST00000378536 FOXD4L3Q6VB84 417 aaPredicted RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms