RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 TSPY26PQ9H489 355 aa17.35■□□□□ 0.37
PRDM16-203ENST00000378391 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
PRDM16-203ENST00000378391 CLASRPQ8N2M8 674 aaKnown RBP17.34■□□□□ 0.37
PRDM16-203ENST00000378391 SEC24BO95487 1268 aa17.34■□□□□ 0.37
PRDM16-203ENST00000378391 VPS53Q5VIR6 699 aa17.34■□□□□ 0.37
PRDM16-203ENST00000378391 GRIN2AQ12879 1464 aa17.34■□□□□ 0.37
PRDM16-203ENST00000378391 ZMYND15Q9H091 742 aa17.34■□□□□ 0.37
PRDM16-203ENST00000378391 RALYLQ86SE5 291 aaKnown RBP17.33■□□□□ 0.36
PRDM16-203ENST00000378391 COL17A1Q9UMD9 1497 aaPredicted RBP17.33■□□□□ 0.36
PRDM16-203ENST00000378391 DENND4BO75064 1496 aaPredicted RBP17.33■□□□□ 0.36
PRDM16-203ENST00000378391 NFXL1Q6ZNB6 911 aa17.32■□□□□ 0.36
PRDM16-203ENST00000378391 TRIM5Q9C035 493 aa17.32■□□□□ 0.36
PRDM16-203ENST00000378391 HSP90B2PQ58FF3 399 aa17.32■□□□□ 0.36
PRDM16-203ENST00000378391 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
PRDM16-203ENST00000378391 AMOTL1Q8IY63 956 aa17.32■□□□□ 0.36
PRDM16-203ENST00000378391 CABP2Q9NPB3 220 aa17.32■□□□□ 0.36
PRDM16-203ENST00000378391 CIZ1Q9ULV3 898 aaPredicted RBP17.32■□□□□ 0.36
PRDM16-203ENST00000378391 XRCC6P12956 609 aaKnown RBP eCLIP17.32■□□□□ 0.36
PRDM16-203ENST00000378391 ATF7IPQ6VMQ6 1270 aa17.32■□□□□ 0.36
PRDM16-203ENST00000378391 ERICH2A1L162 156 aa17.31■□□□□ 0.36
PRDM16-203ENST00000378391 FAM135AQ9P2D6 1515 aa17.31■□□□□ 0.36
PRDM16-203ENST00000378391 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
PRDM16-203ENST00000378391 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
PRDM16-203ENST00000378391 KIAA0556O60303 1618 aa17.3■□□□□ 0.36
PRDM16-203ENST00000378391 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
PRDM16-203ENST00000378391 ASXL1Q8IXJ9 1541 aa17.3■□□□□ 0.36
PRDM16-203ENST00000378391 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
PRDM16-203ENST00000378391 TWISTNBQ3B726 338 aaPredicted RBP17.3■□□□□ 0.36
PRDM16-203ENST00000378391 OLFM4Q6UX06 510 aa17.3■□□□□ 0.36
PRDM16-203ENST00000378391 AFAP1Q8N556 730 aa17.3■□□□□ 0.36
PRDM16-203ENST00000378391 NSD3Q9BZ95 1437 aa17.3■□□□□ 0.36
PRDM16-203ENST00000378391 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.3■□□□□ 0.36
PRDM16-203ENST00000378391 K7ELQ4 463 aaPredicted RBP17.3■□□□□ 0.36
PRDM16-203ENST00000378391 CCDC30Q5VVM6 783 aa17.3■□□□□ 0.36
PRDM16-203ENST00000378391 C1orf115Q9H7X2 142 aa17.29■□□□□ 0.36
PRDM16-203ENST00000378391 ADGRL2O95490 1459 aa17.29■□□□□ 0.36
PRDM16-203ENST00000378391 PRKAR2BP31323 418 aa17.29■□□□□ 0.36
PRDM16-203ENST00000378391 PCDHB15Q9Y5E8 787 aa17.29■□□□□ 0.36
PRDM16-203ENST00000378391 SCAF11Q99590 1463 aaKnown RBP17.29■□□□□ 0.36
PRDM16-203ENST00000378391 HIP1O00291 1037 aa17.29■□□□□ 0.36
PRDM16-203ENST00000378391 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
PRDM16-203ENST00000378391 PANK2Q9BZ23 570 aa17.29■□□□□ 0.36
PRDM16-203ENST00000378391 INSRP06213 1382 aa17.28■□□□□ 0.36
PRDM16-203ENST00000378391 KINO60870 393 aaKnown RBP17.28■□□□□ 0.36
PRDM16-203ENST00000378391 CHD1LQ86WJ1 897 aa17.28■□□□□ 0.36
PRDM16-203ENST00000378391 NOL10Q9BSC4 688 aaKnown RBP17.28■□□□□ 0.36
PRDM16-203ENST00000378391 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
PRDM16-203ENST00000378391 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
PRDM16-203ENST00000378391 AK7Q96M32 723 aa17.27■□□□□ 0.36
PRDM16-203ENST00000378391 ADAMTS12P58397 1594 aa17.27■□□□□ 0.36
PRDM16-203ENST00000378391 RUFY1Q96T51 708 aa17.27■□□□□ 0.36
PRDM16-203ENST00000378391 FSD1Q9BTV5 496 aa17.27■□□□□ 0.36
PRDM16-203ENST00000378391 BCORL1Q5H9F3 1711 aa17.27■□□□□ 0.35
PRDM16-203ENST00000378391 CDR1P51861 262 aa17.26■□□□□ 0.35
PRDM16-203ENST00000378391 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
PRDM16-203ENST00000378391 ADGBQ8N7X0 1667 aa17.26■□□□□ 0.35
PRDM16-203ENST00000378391 CCDC27Q2M243 656 aa17.26■□□□□ 0.35
PRDM16-203ENST00000378391 NEUROD6Q96NK8 337 aa17.26■□□□□ 0.35
PRDM16-203ENST00000378391 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
PRDM16-203ENST00000378391 GNAI2P04899 355 aa17.26■□□□□ 0.35
PRDM16-203ENST00000378391 PSME1Q06323 249 aa17.26■□□□□ 0.35
PRDM16-203ENST00000378391 TMEM57Q8N5G2 664 aa17.26■□□□□ 0.35
PRDM16-203ENST00000378391 CCP110O43303 1012 aa17.26■□□□□ 0.35
PRDM16-203ENST00000378391 TNPO1Q92973 898 aaKnown RBP17.26■□□□□ 0.35
PRDM16-203ENST00000378391 NUP160Q12769 1436 aa17.25■□□□□ 0.35
PRDM16-203ENST00000378391 GPRASP1Q5JY77 1395 aa17.25■□□□□ 0.35
PRDM16-203ENST00000378391 WDR33Q9C0J8 1336 aaKnown RBP17.25■□□□□ 0.35
PRDM16-203ENST00000378391 FOSBP53539 338 aa17.25■□□□□ 0.35
PRDM16-203ENST00000378391 RRAGDQ9NQL2 400 aaPredicted RBP17.25■□□□□ 0.35
PRDM16-203ENST00000378391 EIF2AK4Q9P2K8 1649 aaKnown RBP17.25■□□□□ 0.35
PRDM16-203ENST00000378391 FIBPO43427 364 aa17.25■□□□□ 0.35
PRDM16-203ENST00000378391 USP8P40818 1118 aa17.25■□□□□ 0.35
PRDM16-203ENST00000378391 RBM25P49756 843 aaKnown RBP17.25■□□□□ 0.35
PRDM16-203ENST00000378391 MBD5Q9P267 1494 aa17.25■□□□□ 0.35
PRDM16-203ENST00000378391 SSR1P43307 286 aaKnown RBP17.25■□□□□ 0.35
PRDM16-203ENST00000378391 RBM10P98175 930 aaKnown RBP17.25■□□□□ 0.35
PRDM16-203ENST00000378391 DHX8Q14562 1220 aaKnown RBP17.25■□□□□ 0.35
PRDM16-203ENST00000378391 TSPYL1Q9H0U9 437 aa17.25■□□□□ 0.35
PRDM16-203ENST00000378391 CLCN1P35523 988 aa17.25■□□□□ 0.35
PRDM16-203ENST00000378391 WASHC4Q2M389 1173 aa17.25■□□□□ 0.35
PRDM16-203ENST00000378391 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
PRDM16-203ENST00000378391 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
PRDM16-203ENST00000378391 ERCC4Q92889 916 aaPredicted RBP17.24■□□□□ 0.35
PRDM16-203ENST00000378391 PIK3C2GO75747 1445 aa17.23■□□□□ 0.35
PRDM16-203ENST00000378391 CCDC192P0DO97 292 aa17.23■□□□□ 0.35
PRDM16-203ENST00000378391 EVA1CP58658 441 aa17.23■□□□□ 0.35
PRDM16-203ENST00000378391 ZNF428Q96B54 188 aa17.23■□□□□ 0.35
PRDM16-203ENST00000378391 XBP1P17861 261 aa17.23■□□□□ 0.35
PRDM16-203ENST00000378391 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
PRDM16-203ENST00000378391 GPATCH11Q8N954 259 aa17.23■□□□□ 0.35
PRDM16-203ENST00000378391 CYB5RLQ6IPT4 315 aa17.22■□□□□ 0.35
PRDM16-203ENST00000378391 TNNQ9UQP3 1299 aa17.22■□□□□ 0.35
PRDM16-203ENST00000378391 VPS37DQ86XT2 251 aa17.22■□□□□ 0.35
PRDM16-203ENST00000378391 GIMAP7Q8NHV1 300 aa17.22■□□□□ 0.35
PRDM16-203ENST00000378391 DNAJC5BQ9UF47 199 aa17.22■□□□□ 0.35
PRDM16-203ENST00000378391 PDILTQ8N807 584 aa17.22■□□□□ 0.35
PRDM16-203ENST00000378391 SSH1Q8WYL5 1049 aa17.22■□□□□ 0.35
PRDM16-203ENST00000378391 ZNF396Q96N95 335 aaPredicted RBP17.22■□□□□ 0.35
PRDM16-203ENST00000378391 DHX16O60231 1041 aaKnown RBP17.22■□□□□ 0.35
PRDM16-203ENST00000378391 CCT4P50991 539 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms