RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 DISP2A7MBM2 1401 aa25.3■■□□□ 1.64
COMMD6-202ENST00000377612 OVOS2Q6IE36 1432 aa25.3■■□□□ 1.64
COMMD6-202ENST00000377612 AXIN2Q9Y2T1 843 aa25.3■■□□□ 1.64
COMMD6-202ENST00000377612 USP47Q96K76 1375 aa25.3■■□□□ 1.64
COMMD6-202ENST00000377612 RGPD2P0DJD1 1756 aa25.29■■□□□ 1.64
COMMD6-202ENST00000377612 SOX12O15370 315 aa25.29■■□□□ 1.64
COMMD6-202ENST00000377612 ARHGEF25Q86VW2 580 aa25.29■■□□□ 1.64
COMMD6-202ENST00000377612 TCP11L2Q8N4U5 519 aa25.29■■□□□ 1.64
COMMD6-202ENST00000377612 SRCAPQ6ZRS2 3230 aa25.29■■□□□ 1.64
COMMD6-202ENST00000377612 NME9Q86XW9 330 aa25.28■■□□□ 1.64
COMMD6-202ENST00000377612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.28■■□□□ 1.643e-6■■□□□ 14
COMMD6-202ENST00000377612 TMC1Q8TDI8 760 aa25.28■■□□□ 1.64
COMMD6-202ENST00000377612 RGPD3A6NKT7 1758 aaPredicted RBP25.27■■□□□ 1.64
COMMD6-202ENST00000377612 RGPD4Q7Z3J3 1758 aa25.27■■□□□ 1.64
COMMD6-202ENST00000377612 FAM208AQ9UK61 1670 aaKnown RBP25.26■■□□□ 1.63
COMMD6-202ENST00000377612 SF3B2Q13435 895 aaKnown RBP25.26■■□□□ 1.63
COMMD6-202ENST00000377612 WDR17Q8IZU2 1322 aa25.25■■□□□ 1.63
COMMD6-202ENST00000377612 LRP5O75197 1615 aa25.24■■□□□ 1.63
COMMD6-202ENST00000377612 KCNH5Q8NCM2 988 aa25.24■■□□□ 1.63
COMMD6-202ENST00000377612 PUS7Q96PZ0 661 aaKnown RBP25.24■■□□□ 1.63
COMMD6-202ENST00000377612 THRAP3Q9Y2W1 955 aaKnown RBP25.24■■□□□ 1.63
COMMD6-202ENST00000377612 NINLQ9Y2I6 1382 aa25.23■■□□□ 1.63
COMMD6-202ENST00000377612 HDGFL2Q7Z4V5 671 aaPredicted RBP25.21■■□□□ 1.63
COMMD6-202ENST00000377612 BAG6P46379 1132 aa25.2■■□□□ 1.62
COMMD6-202ENST00000377612 EN1Q05925 392 aaPredicted RBP25.2■■□□□ 1.62
COMMD6-202ENST00000377612 SHANK3Q9BYB0 1731 aa25.18■■□□□ 1.62
COMMD6-202ENST00000377612 TRIM37O94972 964 aa25.18■■□□□ 1.62
COMMD6-202ENST00000377612 FAM196AQ6ZSG2 479 aa25.18■■□□□ 1.62
COMMD6-202ENST00000377612 TOM1L2Q6ZVM7 507 aa25.18■■□□□ 1.62
COMMD6-202ENST00000377612 PCGF6Q9BYE7 350 aa25.18■■□□□ 1.62
COMMD6-202ENST00000377612 TERF2IPQ9NYB0 399 aa25.17■■□□□ 1.62
COMMD6-202ENST00000377612 OVOS2A0A0G2JMS6 1433 aa25.17■■□□□ 1.62
COMMD6-202ENST00000377612 ANKRD36BQ8N2N9 1353 aa25.17■■□□□ 1.62
COMMD6-202ENST00000377612 CLSPNQ9HAW4 1339 aa25.16■■□□□ 1.62
COMMD6-202ENST00000377612 PDE3BQ13370 1112 aa25.16■■□□□ 1.62
COMMD6-202ENST00000377612 NHSQ6T4R5 1651 aa25.15■■□□□ 1.62
COMMD6-202ENST00000377612 ERBB3P21860 1342 aa25.13■■□□□ 1.61
COMMD6-202ENST00000377612 EZH2Q15910 746 aaKnown RBP25.13■■□□□ 1.61
COMMD6-202ENST00000377612 TNS2Q63HR2 1409 aa25.12■■□□□ 1.61
COMMD6-202ENST00000377612 CARD10Q9BWT7 1032 aa25.12■■□□□ 1.61
COMMD6-202ENST00000377612 ANKRD26Q9UPS8 1709 aa25.12■■□□□ 1.61
COMMD6-202ENST00000377612 CAMKK2Q96RR4 588 aa25.11■■□□□ 1.61
COMMD6-202ENST00000377612 CCDC7Q96M83 1385 aa25.1■■□□□ 1.61
COMMD6-202ENST00000377612 PSDA5PKW4 1024 aaPredicted RBP25.1■■□□□ 1.61
COMMD6-202ENST00000377612 BTAF1O14981 1849 aa25.09■■□□□ 1.61
COMMD6-202ENST00000377612 CSB-PGBD3P0DP91 1061 aa25.09■■□□□ 1.61
COMMD6-202ENST00000377612 TMF1P82094 1093 aa25.09■■□□□ 1.61
COMMD6-202ENST00000377612 KAT6BQ8WYB5 2073 aa25.09■■□□□ 1.61
COMMD6-202ENST00000377612 DDB1Q16531 1140 aa25.08■■□□□ 1.61
COMMD6-202ENST00000377612 TIMELESSQ9UNS1 1208 aa25.08■■□□□ 1.61
COMMD6-202ENST00000377612 PARD3Q8TEW0 1356 aa25.07■■□□□ 1.6
COMMD6-202ENST00000377612 APBA3O96018 575 aa25.07■■□□□ 1.6
COMMD6-202ENST00000377612 BCL9O00512 1426 aa25.06■■□□□ 1.6
COMMD6-202ENST00000377612 MARCH10Q8NA82 808 aaPredicted RBP25.06■■□□□ 1.6
COMMD6-202ENST00000377612 MAP2P11137 1827 aaKnown RBP25.06■■□□□ 1.6
COMMD6-202ENST00000377612 SLC24A1O60721 1099 aa25.05■■□□□ 1.6
COMMD6-202ENST00000377612 PTF1AQ7RTS3 328 aa25.05■■□□□ 1.6
COMMD6-202ENST00000377612 DOT1LQ8TEK3 1739 aa25.05■■□□□ 1.6
COMMD6-202ENST00000377612 FBLN1P23142 703 aa25.04■■□□□ 1.6
COMMD6-202ENST00000377612 ANKRD24Q8TF21 1146 aa25.03■■□□□ 1.6
COMMD6-202ENST00000377612 CDCA7Q9BWT1 371 aaPredicted RBP25.03■■□□□ 1.6
COMMD6-202ENST00000377612 MAP3K19Q56UN5 1328 aa25.03■■□□□ 1.6
COMMD6-202ENST00000377612 CASZ1Q86V15 1759 aa25.03■■□□□ 1.6
COMMD6-202ENST00000377612 R3HDM1Q15032 1099 aaKnown RBP25■■□□□ 1.59
COMMD6-202ENST00000377612 COG3Q96JB2 828 aa25■■□□□ 1.59
COMMD6-202ENST00000377612 NSD3Q9BZ95 1437 aa25■■□□□ 1.59
COMMD6-202ENST00000377612 IP6K1Q92551 441 aa24.99■■□□□ 1.59
COMMD6-202ENST00000377612 NLRP2Q9NX02 1062 aa24.99■■□□□ 1.59
COMMD6-202ENST00000377612 FYB1O15117 783 aa24.98■■□□□ 1.59
COMMD6-202ENST00000377612 GGNBP2Q9H3C7 697 aa24.98■■□□□ 1.59
COMMD6-202ENST00000377612 PAPPAQ13219 1627 aa24.97■■□□□ 1.59
COMMD6-202ENST00000377612 RTL1A6NKG5 1358 aa24.97■■□□□ 1.59
COMMD6-202ENST00000377612 HOXC9P31274 260 aa24.96■■□□□ 1.59
COMMD6-202ENST00000377612 CARD14Q9BXL6 1004 aa24.96■■□□□ 1.59
COMMD6-202ENST00000377612 MEGF6O75095 1541 aa24.96■■□□□ 1.59
COMMD6-202ENST00000377612 C11orf95C9JLR9 678 aaPredicted RBP24.95■■□□□ 1.58
COMMD6-202ENST00000377612 CDCA8Q53HL2 280 aa24.94■■□□□ 1.58
COMMD6-202ENST00000377612 CCER1Q8TC90 406 aaPredicted RBP24.94■■□□□ 1.58
COMMD6-202ENST00000377612 LTV1Q96GA3 475 aaPredicted RBP24.94■■□□□ 1.58
COMMD6-202ENST00000377612 TUBGCP6Q96RT7 1819 aa24.93■■□□□ 1.58
COMMD6-202ENST00000377612 EXOC5O00471 708 aa24.93■■□□□ 1.58
COMMD6-202ENST00000377612 IL2RBP14784 551 aa24.93■■□□□ 1.58
COMMD6-202ENST00000377612 RRS1Q15050 365 aaKnown RBP24.93■■□□□ 1.58
COMMD6-202ENST00000377612 PKD1L3Q7Z443 1732 aa24.92■■□□□ 1.58
COMMD6-202ENST00000377612 BCL11BQ9C0K0 894 aaPredicted RBP24.92■■□□□ 1.58
COMMD6-202ENST00000377612 LY75O60449 1722 aa24.92■■□□□ 1.58
COMMD6-202ENST00000377612 TOGARAM1Q9Y4F4 1720 aa24.9■■□□□ 1.58
COMMD6-202ENST00000377612 PLSCR1O15162 318 aa24.89■■□□□ 1.58
COMMD6-202ENST00000377612 ANO8Q9HCE9 1232 aaPredicted RBP24.89■■□□□ 1.58
COMMD6-202ENST00000377612 KCNQ2O43526 872 aa24.88■■□□□ 1.57
COMMD6-202ENST00000377612 AMPHP49418 695 aa24.88■■□□□ 1.57
COMMD6-202ENST00000377612 ITGB4P16144 1822 aa24.88■■□□□ 1.57
COMMD6-202ENST00000377612 HSPA5P11021 654 aaKnown RBP24.87■■□□□ 1.57
COMMD6-202ENST00000377612 QSER1Q2KHR3 1735 aa24.86■■□□□ 1.57
COMMD6-202ENST00000377612 PROM2Q8N271 834 aa24.86■■□□□ 1.57
COMMD6-202ENST00000377612 FLT4P35916 1363 aa24.85■■□□□ 1.57
COMMD6-202ENST00000377612 ACSBG1Q96GR2 724 aa24.85■■□□□ 1.57
COMMD6-202ENST00000377612 INSRP06213 1382 aa24.84■■□□□ 1.57
COMMD6-202ENST00000377612 KIF24Q5T7B8 1368 aa24.82■■□□□ 1.56
COMMD6-202ENST00000377612 EIF4G2P78344 907 aaKnown RBP eCLIP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms