RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 MTERF4Q7Z6M4 381 aaKnown RBP14.81□□□□□ -0.04
SF1-204ENST00000377390 NOL7Q9UMY1 257 aaKnown RBP14.81□□□□□ -0.04
SF1-204ENST00000377390 CHMP3Q9Y3E7 222 aa14.81□□□□□ -0.04
SF1-204ENST00000377390 SCAF11Q99590 1463 aaKnown RBP14.81□□□□□ -0.04
SF1-204ENST00000377390 KDM5DQ9BY66 1539 aa14.81□□□□□ -0.04
SF1-204ENST00000377390 DYNC1I1O14576 645 aa14.8□□□□□ -0.04
SF1-204ENST00000377390 NAP1L2Q9ULW6 460 aaPredicted RBP14.8□□□□□ -0.04
SF1-204ENST00000377390 FAM83GA6ND36 823 aa14.8□□□□□ -0.04
SF1-204ENST00000377390 TRIM6-TRIM34B2RNG4 842 aa14.8□□□□□ -0.04
SF1-204ENST00000377390 SASS6Q6UVJ0 657 aa14.8□□□□□ -0.04
SF1-204ENST00000377390 ZBTB22O15209 634 aa14.79□□□□□ -0.04
SF1-204ENST00000377390 DIAPH1O60610 1272 aaKnown RBP14.79□□□□□ -0.04
SF1-204ENST00000377390 GCC1Q96CN9 775 aa14.79□□□□□ -0.04
SF1-204ENST00000377390 LMBRD1Q9NUN5 540 aa14.79□□□□□ -0.04
SF1-204ENST00000377390 PRKAR2BP31323 418 aa14.79□□□□□ -0.04
SF1-204ENST00000377390 INTS3Q68E01 1043 aaKnown RBP14.79□□□□□ -0.04
SF1-204ENST00000377390 RILPL2Q969X0 211 aa14.79□□□□□ -0.04
SF1-204ENST00000377390 TTC12Q9H892 705 aaPredicted RBP14.79□□□□□ -0.04
SF1-204ENST00000377390 TERF2IPQ9NYB0 399 aa14.79□□□□□ -0.04
SF1-204ENST00000377390 POLR3AO14802 1390 aaPredicted RBP14.78□□□□□ -0.04
SF1-204ENST00000377390 ATAD2Q6PL18 1390 aa14.78□□□□□ -0.04
SF1-204ENST00000377390 CHMP4AQ9BY43 222 aa14.78□□□□□ -0.04
SF1-204ENST00000377390 USP25Q9UHP3 1055 aa14.78□□□□□ -0.04
SF1-204ENST00000377390 DTNBO60941 627 aa14.78□□□□□ -0.04
SF1-204ENST00000377390 CCDC94Q9BW85 323 aaPredicted RBP14.78□□□□□ -0.04
SF1-204ENST00000377390 TMEM63CQ9P1W3 806 aa14.78□□□□□ -0.04
SF1-204ENST00000377390 SPC24Q8NBT2 197 aa14.78□□□□□ -0.04
SF1-204ENST00000377390 TRERF1Q96PN7 1200 aa14.78□□□□□ -0.04
SF1-204ENST00000377390 KIF2CQ99661 725 aa14.78□□□□□ -0.04
SF1-204ENST00000377390 TSPY26PQ9H489 355 aa14.78□□□□□ -0.04
SF1-204ENST00000377390 CHAF1AQ13111 956 aaPredicted RBP14.77□□□□□ -0.04
SF1-204ENST00000377390 OTUD7AQ8TE49 926 aaPredicted RBP14.77□□□□□ -0.04
SF1-204ENST00000377390 NSFL1CQ9UNZ2 370 aaKnown RBP14.77□□□□□ -0.04
SF1-204ENST00000377390 SYAP1Q96A49 352 aaPredicted RBP14.77□□□□□ -0.05
SF1-204ENST00000377390 TSHZ3Q63HK5 1081 aa14.76□□□□□ -0.05
SF1-204ENST00000377390 AEBP2Q6ZN18 517 aaPredicted RBP14.76□□□□□ -0.05
SF1-204ENST00000377390 TSPYL6Q8N831 410 aa14.76□□□□□ -0.05
SF1-204ENST00000377390 ANO2Q9NQ90 1003 aa14.76□□□□□ -0.05
SF1-204ENST00000377390 DRC7Q8IY82 874 aa14.76□□□□□ -0.05
SF1-204ENST00000377390 USHBP1Q8N6Y0 703 aa14.76□□□□□ -0.05
SF1-204ENST00000377390 GPT2Q8TD30 523 aa14.76□□□□□ -0.05
SF1-204ENST00000377390 UPF3BQ9BZI7 483 aaKnown RBP14.76□□□□□ -0.05
SF1-204ENST00000377390 LARP6Q9BRS8 491 aaKnown RBP14.75□□□□□ -0.05
SF1-204ENST00000377390 TSPOAP1O95153 1857 aa14.75□□□□□ -0.05
SF1-204ENST00000377390 CCDC27Q2M243 656 aa14.75□□□□□ -0.05
SF1-204ENST00000377390 LRSAM1Q6UWE0 723 aa14.75□□□□□ -0.05
SF1-204ENST00000377390 ZNF445P59923 1031 aa14.75□□□□□ -0.05
SF1-204ENST00000377390 TRIM35Q9UPQ4 493 aa14.75□□□□□ -0.05
SF1-204ENST00000377390 TRPM1Q7Z4N2 1603 aa14.75□□□□□ -0.05
SF1-204ENST00000377390 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.74□□□□□ -0.058e-9■□□□□ 10.7
SF1-204ENST00000377390 REC8O95072 547 aa14.74□□□□□ -0.05
SF1-204ENST00000377390 CT47B1P0C2W7 299 aaPredicted RBP14.74□□□□□ -0.05
SF1-204ENST00000377390 KRT24Q2M2I5 525 aa14.74□□□□□ -0.05
SF1-204ENST00000377390 CDC42BPBQ9Y5S2 1711 aa14.73□□□□□ -0.05
SF1-204ENST00000377390 ADGBQ8N7X0 1667 aa14.73□□□□□ -0.05
SF1-204ENST00000377390 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.73□□□□□ -0.05
SF1-204ENST00000377390 DMTNQ08495 405 aa14.73□□□□□ -0.05
SF1-204ENST00000377390 E9PCH4 1651 aa14.73□□□□□ -0.05
SF1-204ENST00000377390 TWISTNBQ3B726 338 aaPredicted RBP14.73□□□□□ -0.05
SF1-204ENST00000377390 TAOK2Q9UL54 1235 aa14.73□□□□□ -0.05
SF1-204ENST00000377390 AK9Q5TCS8 1911 aa14.72□□□□□ -0.05
SF1-204ENST00000377390 PDIA4P13667 645 aaKnown RBP14.72□□□□□ -0.05
SF1-204ENST00000377390 C14orf93Q9H972 538 aaKnown RBP14.72□□□□□ -0.05
SF1-204ENST00000377390 CWC22Q9HCG8 908 aaKnown RBP14.72□□□□□ -0.05
SF1-204ENST00000377390 PRDM15P57071 1507 aaPredicted RBP14.72□□□□□ -0.05
SF1-204ENST00000377390 ZBTB7BO15156 539 aaPredicted RBP14.72□□□□□ -0.05
SF1-204ENST00000377390 DDIT3P35638 169 aa14.72□□□□□ -0.05
SF1-204ENST00000377390 AMPHP49418 695 aa14.72□□□□□ -0.05
SF1-204ENST00000377390 PDCL2Q8N4E4 241 aa14.72□□□□□ -0.05
SF1-204ENST00000377390 MBD3O95983 291 aa14.72□□□□□ -0.05
SF1-204ENST00000377390 KIF3AQ9Y496 699 aa14.72□□□□□ -0.05
SF1-204ENST00000377390 ZCCHC11Q5TAX3 1644 aaKnown RBP14.72□□□□□ -0.05
SF1-204ENST00000377390 ERICH4A6NGS2 130 aa14.71□□□□□ -0.05
SF1-204ENST00000377390 FIBPO43427 364 aa14.71□□□□□ -0.05
SF1-204ENST00000377390 ZNF500O60304 480 aaPredicted RBP14.71□□□□□ -0.05
SF1-204ENST00000377390 GSPT1P15170 499 aaKnown RBP14.71□□□□□ -0.05
SF1-204ENST00000377390 MCCP23508 829 aa14.71□□□□□ -0.05
SF1-204ENST00000377390 U2AF2P26368 475 aaKnown RBP eCLIP14.71□□□□□ -0.053e-8■■■■■ 38.7
SF1-204ENST00000377390 NPC1L1Q9UHC9 1359 aa14.71□□□□□ -0.05
SF1-204ENST00000377390 SDSP20132 328 aa14.71□□□□□ -0.06
SF1-204ENST00000377390 COG3Q96JB2 828 aa14.71□□□□□ -0.06
SF1-204ENST00000377390 HCLS1P14317 486 aaPredicted RBP14.7□□□□□ -0.06
SF1-204ENST00000377390 ZSCAN20P17040 1043 aaPredicted RBP14.7□□□□□ -0.06
SF1-204ENST00000377390 MCM10Q7L590 875 aa14.7□□□□□ -0.06
SF1-204ENST00000377390 AEBP1Q8IUX7 1158 aa14.7□□□□□ -0.06
SF1-204ENST00000377390 PLEKHM2Q8IWE5 1019 aa14.7□□□□□ -0.06
SF1-204ENST00000377390 SULT6B1Q6IMI4 303 aa14.7□□□□□ -0.06
SF1-204ENST00000377390 ZNF592Q92610 1267 aa14.7□□□□□ -0.06
SF1-204ENST00000377390 USP26Q9BXU7 913 aa14.7□□□□□ -0.06
SF1-204ENST00000377390 ZNF330Q9Y3S2 320 aaPredicted RBP14.7□□□□□ -0.06
SF1-204ENST00000377390 GTF2E1P29083 439 aaPredicted RBP14.69□□□□□ -0.06
SF1-204ENST00000377390 DUOX2Q9NRD8 1548 aa14.69□□□□□ -0.06
SF1-204ENST00000377390 FYB1O15117 783 aa14.69□□□□□ -0.06
SF1-204ENST00000377390 PHF14O94880 888 aa14.69□□□□□ -0.06
SF1-204ENST00000377390 NOLC1Q14978 699 aaKnown RBP eCLIP14.69□□□□□ -0.06
SF1-204ENST00000377390 HS1BP3Q53T59 392 aa14.69□□□□□ -0.06
SF1-204ENST00000377390 STAC3Q96MF2 364 aa14.69□□□□□ -0.06
SF1-204ENST00000377390 NLRP6P59044 892 aa14.69□□□□□ -0.06
SF1-204ENST00000377390 TMX3Q96JJ7 454 aa14.69□□□□□ -0.06
SF1-204ENST00000377390 EID1Q9Y6B2 187 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms