RNA–Protein interactions for RNA: ENST00000377139.7

IRF3-203, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-203ENST00000377139 GTF3C3Q9Y5Q9 886 aa23.89■■□□□ 1.42
IRF3-203ENST00000377139 DDX17Q92841 729 aaKnown RBP23.88■■□□□ 1.41
IRF3-203ENST00000377139 NHSL1Q5SYE7 1610 aa23.88■■□□□ 1.41
IRF3-203ENST00000377139 GCP02774 474 aa23.88■■□□□ 1.41
IRF3-203ENST00000377139 HOXC9P31274 260 aa23.88■■□□□ 1.41
IRF3-203ENST00000377139 CCDC27Q2M243 656 aa23.88■■□□□ 1.41
IRF3-203ENST00000377139 SPATA31A3Q5VYP0 1347 aa23.87■■□□□ 1.41
IRF3-203ENST00000377139 GOLGA2Q08379 1002 aa23.87■■□□□ 1.41
IRF3-203ENST00000377139 MED1Q15648 1581 aaPredicted RBP23.86■■□□□ 1.41
IRF3-203ENST00000377139 SOS2Q07890 1332 aaPredicted RBP23.86■■□□□ 1.41
IRF3-203ENST00000377139 PRKAR2BP31323 418 aa23.85■■□□□ 1.41
IRF3-203ENST00000377139 HMOX1P09601 288 aa23.84■■□□□ 1.41
IRF3-203ENST00000377139 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
IRF3-203ENST00000377139 WWC1Q8IX03 1113 aa23.84■■□□□ 1.41
IRF3-203ENST00000377139 IP6K1Q92551 441 aa23.84■■□□□ 1.41
IRF3-203ENST00000377139 TMPOP42166 694 aaKnown RBP23.83■■□□□ 1.41
IRF3-203ENST00000377139 CDCA7LQ96GN5 454 aa23.83■■□□□ 1.41
IRF3-203ENST00000377139 CRYBG1Q9Y4K1 1723 aa23.82■■□□□ 1.4
IRF3-203ENST00000377139 ARHGEF25Q86VW2 580 aa23.82■■□□□ 1.4
IRF3-203ENST00000377139 RRP7AQ9Y3A4 280 aaKnown RBP23.82■■□□□ 1.4
IRF3-203ENST00000377139 NEUROD2Q15784 382 aa23.81■■□□□ 1.4
IRF3-203ENST00000377139 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
IRF3-203ENST00000377139 WDR63Q8IWG1 891 aa23.81■■□□□ 1.4
IRF3-203ENST00000377139 IGSF1Q8N6C5 1336 aa23.8■■□□□ 1.4
IRF3-203ENST00000377139 E9PSI1 815 aa23.8■■□□□ 1.4
IRF3-203ENST00000377139 SLFN5Q08AF3 891 aa23.79■■□□□ 1.4
IRF3-203ENST00000377139 SULT6B1Q6IMI4 303 aa23.79■■□□□ 1.4
IRF3-203ENST00000377139 KDRP35968 1356 aa23.78■■□□□ 1.4
IRF3-203ENST00000377139 NEFLP07196 543 aa23.78■■□□□ 1.4
IRF3-203ENST00000377139 SUPT16HQ9Y5B9 1047 aaKnown RBP23.78■■□□□ 1.4
IRF3-203ENST00000377139 ROBO1Q9Y6N7 1651 aa23.78■■□□□ 1.4
IRF3-203ENST00000377139 ABCC6O95255 1503 aa23.77■■□□□ 1.4
IRF3-203ENST00000377139 NFE2L2Q16236 605 aa23.77■■□□□ 1.4
IRF3-203ENST00000377139 RIPK4P57078 832 aa23.76■■□□□ 1.39
IRF3-203ENST00000377139 DUSP27Q5VZP5 1158 aa23.76■■□□□ 1.39
IRF3-203ENST00000377139 TRMT2AQ8IZ69 625 aaKnown RBP23.76■■□□□ 1.39
IRF3-203ENST00000377139 EYA1Q99502 592 aa23.76■■□□□ 1.39
IRF3-203ENST00000377139 AHDC1Q5TGY3 1603 aaPredicted RBP23.75■■□□□ 1.39
IRF3-203ENST00000377139 ZBTB7CA1YPR0 619 aa23.75■■□□□ 1.39
IRF3-203ENST00000377139 PLEKHG5O94827 1062 aa23.74■■□□□ 1.39
IRF3-203ENST00000377139 AEBP1Q8IUX7 1158 aa23.74■■□□□ 1.39
IRF3-203ENST00000377139 PHACTR3Q96KR7 559 aa23.74■■□□□ 1.39
IRF3-203ENST00000377139 LMOD3Q0VAK6 560 aa23.73■■□□□ 1.39
IRF3-203ENST00000377139 TRIM35Q9UPQ4 493 aa23.73■■□□□ 1.39
IRF3-203ENST00000377139 CPDO75976 1380 aa23.73■■□□□ 1.39
IRF3-203ENST00000377139 LTV1Q96GA3 475 aaPredicted RBP23.71■■□□□ 1.39
IRF3-203ENST00000377139 DLG5Q8TDM6 1919 aa23.71■■□□□ 1.39
IRF3-203ENST00000377139 ABCA3Q99758 1704 aa23.71■■□□□ 1.39
IRF3-203ENST00000377139 IL16Q14005 1332 aa23.71■■□□□ 1.39
IRF3-203ENST00000377139 ZC3H6P61129 1189 aaKnown RBP23.7■■□□□ 1.39
IRF3-203ENST00000377139 RCAN3Q9UKA8 241 aa23.7■■□□□ 1.39
IRF3-203ENST00000377139 SPINK5Q9NQ38 1064 aaPredicted RBP23.7■■□□□ 1.38
IRF3-203ENST00000377139 COL18A1P39060 1754 aa23.69■■□□□ 1.38
IRF3-203ENST00000377139 CABLES1Q8TDN4 633 aa23.69■■□□□ 1.38
IRF3-203ENST00000377139 MYH16Q9H6N6 1097 aa23.69■■□□□ 1.38
IRF3-203ENST00000377139 CAMTA1Q9Y6Y1 1673 aa23.68■■□□□ 1.38
IRF3-203ENST00000377139 TOM1O60784 492 aa23.68■■□□□ 1.38
IRF3-203ENST00000377139 CALD1Q05682 793 aaKnown RBP23.68■■□□□ 1.38
IRF3-203ENST00000377139 RGPD5Q99666 1765 aa23.68■■□□□ 1.38
IRF3-203ENST00000377139 RNF123Q5XPI4 1314 aa23.67■■□□□ 1.38
IRF3-203ENST00000377139 ANKRD24Q8TF21 1146 aa23.66■■□□□ 1.38
IRF3-203ENST00000377139 LRRC59Q96AG4 307 aaKnown RBP23.66■■□□□ 1.38
IRF3-203ENST00000377139 FAM208AQ9UK61 1670 aaKnown RBP23.66■■□□□ 1.38
IRF3-203ENST00000377139 NCAPD2Q15021 1401 aa23.66■■□□□ 1.38
IRF3-203ENST00000377139 RGPD2P0DJD1 1756 aa23.65■■□□□ 1.38
IRF3-203ENST00000377139 HAP1P54257 671 aaPredicted RBP23.65■■□□□ 1.38
IRF3-203ENST00000377139 ERBB3P21860 1342 aa23.65■■□□□ 1.38
IRF3-203ENST00000377139 KIAA0232Q92628 1395 aa23.65■■□□□ 1.38
IRF3-203ENST00000377139 GAS2L2Q8NHY3 880 aa23.64■■□□□ 1.38
IRF3-203ENST00000377139 AXIN2Q9Y2T1 843 aa23.64■■□□□ 1.38
IRF3-203ENST00000377139 FKBP8Q14318 412 aa23.63■■□□□ 1.37
IRF3-203ENST00000377139 NBPF6Q5VWK0 638 aa23.63■■□□□ 1.37
IRF3-203ENST00000377139 NBPF4Q96M43 638 aa23.63■■□□□ 1.37
IRF3-203ENST00000377139 COL22A1Q8NFW1 1626 aaPredicted RBP23.62■■□□□ 1.37
IRF3-203ENST00000377139 LMO7Q8WWI1 1683 aa23.62■■□□□ 1.37
IRF3-203ENST00000377139 PHLPP1O60346 1717 aa23.61■■□□□ 1.37
IRF3-203ENST00000377139 PRDM11Q9NQV5 511 aa23.59■■□□□ 1.37
IRF3-203ENST00000377139 MTHFSDQ2M296 383 aaKnown RBP23.59■■□□□ 1.37
IRF3-203ENST00000377139 USHBP1Q8N6Y0 703 aa23.59■■□□□ 1.37
IRF3-203ENST00000377139 COL16A1Q07092 1604 aaPredicted RBP23.58■■□□□ 1.37
IRF3-203ENST00000377139 ERICH6BQ5W0A0 696 aa23.58■■□□□ 1.36
IRF3-203ENST00000377139 FANCIQ9NVI1 1328 aa23.57■■□□□ 1.36
IRF3-203ENST00000377139 RRP1P56182 461 aaKnown RBP23.57■■□□□ 1.36
IRF3-203ENST00000377139 CHRNA2Q15822 529 aa23.57■■□□□ 1.36
IRF3-203ENST00000377139 HTATSF1O43719 755 aaKnown RBP23.56■■□□□ 1.36
IRF3-203ENST00000377139 CT47B1P0C2W7 299 aaPredicted RBP23.56■■□□□ 1.36
IRF3-203ENST00000377139 GNAI1P63096 354 aa23.56■■□□□ 1.36
IRF3-203ENST00000377139 IFT57Q9NWB7 429 aa23.56■■□□□ 1.36
IRF3-203ENST00000377139 PLEKHG2Q9H7P9 1386 aa23.55■■□□□ 1.36
IRF3-203ENST00000377139 RTF1Q92541 710 aaKnown RBP23.55■■□□□ 1.36
IRF3-203ENST00000377139 FAM83GA6ND36 823 aa23.53■■□□□ 1.36
IRF3-203ENST00000377139 UBAP1LF5GYI3 381 aa23.53■■□□□ 1.36
IRF3-203ENST00000377139 CSB-PGBD3P0DP91 1061 aa23.53■■□□□ 1.36
IRF3-203ENST00000377139 AMOTQ4VCS5 1084 aa23.53■■□□□ 1.36
IRF3-203ENST00000377139 PIP4K2BP78356 416 aa23.52■■□□□ 1.36
IRF3-203ENST00000377139 TSR2Q969E8 191 aaKnown RBP23.52■■□□□ 1.36
IRF3-203ENST00000377139 CFAP44Q96MT7 982 aa23.52■■□□□ 1.36
IRF3-203ENST00000377139 THUMPD2Q9BTF0 503 aaKnown RBP23.52■■□□□ 1.36
IRF3-203ENST00000377139 NLRP2Q9NX02 1062 aa23.52■■□□□ 1.36
IRF3-203ENST00000377139 MAP3K5Q99683 1374 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms