RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 NUDT16Q96DE0 195 aaKnown RBP31.86■■■□□ 2.69
C9orf40-201ENST00000376854 TNRQ92752 1358 aa31.85■■■□□ 2.69
C9orf40-201ENST00000376854 MRPL50Q8N5N7 158 aaKnown RBP31.84■■■□□ 2.69
C9orf40-201ENST00000376854 LNPKQ9C0E8 428 aa31.84■■■□□ 2.69
C9orf40-201ENST00000376854 GNAI1P63096 354 aa31.84■■■□□ 2.69
C9orf40-201ENST00000376854 SPRYD3Q8NCJ5 442 aa31.84■■■□□ 2.69
C9orf40-201ENST00000376854 IFT57Q9NWB7 429 aa31.84■■■□□ 2.69
C9orf40-201ENST00000376854 CHD1LQ86WJ1 897 aa31.83■■■□□ 2.69
C9orf40-201ENST00000376854 MAP2P11137 1827 aaKnown RBP31.83■■■□□ 2.69
C9orf40-201ENST00000376854 TSPYL6Q8N831 410 aa31.82■■■□□ 2.68
C9orf40-201ENST00000376854 ARHGAP45Q92619 1136 aa31.82■■■□□ 2.68
C9orf40-201ENST00000376854 ZBTB7BO15156 539 aaPredicted RBP31.82■■■□□ 2.68
C9orf40-201ENST00000376854 CDK12Q9NYV4 1490 aaPredicted RBP31.81■■■□□ 2.68
C9orf40-201ENST00000376854 CHMP4BQ9H444 224 aaKnown RBP31.81■■■□□ 2.68
C9orf40-201ENST00000376854 MBIPQ9NS73 344 aa31.8■■■□□ 2.68
C9orf40-201ENST00000376854 CPS1P31327 1500 aa31.8■■■□□ 2.68
C9orf40-201ENST00000376854 PTCH1Q13635 1447 aa31.79■■■□□ 2.68
C9orf40-201ENST00000376854 AATKQ6ZMQ8 1374 aa31.79■■■□□ 2.68
C9orf40-201ENST00000376854 ZNF853P0CG23 659 aa31.79■■■□□ 2.68
C9orf40-201ENST00000376854 PIK3R4Q99570 1358 aa31.79■■■□□ 2.68
C9orf40-201ENST00000376854 TECPR2O15040 1411 aa31.78■■■□□ 2.68
C9orf40-201ENST00000376854 TMEM2Q9UHN6 1383 aa31.78■■■□□ 2.68
C9orf40-201ENST00000376854 KNDC1Q76NI1 1749 aa31.77■■■□□ 2.68
C9orf40-201ENST00000376854 ELL2O00472 640 aaPredicted RBP31.77■■■□□ 2.68
C9orf40-201ENST00000376854 COG3Q96JB2 828 aa31.77■■■□□ 2.68
C9orf40-201ENST00000376854 CCDC61Q9Y6R9 512 aa31.77■■■□□ 2.68
C9orf40-201ENST00000376854 PRR36Q9H6K5 1346 aa31.77■■■□□ 2.68
C9orf40-201ENST00000376854 HDGFP51858 240 aaKnown RBP31.75■■■□□ 2.67
C9orf40-201ENST00000376854 LMOD3Q0VAK6 560 aa31.75■■■□□ 2.67
C9orf40-201ENST00000376854 RRS1Q15050 365 aaKnown RBP31.75■■■□□ 2.67
C9orf40-201ENST00000376854 GCC1Q96CN9 775 aa31.75■■■□□ 2.67
C9orf40-201ENST00000376854 C1orf115Q9H7X2 142 aa31.75■■■□□ 2.67
C9orf40-201ENST00000376854 ROBO2Q9HCK4 1378 aa31.75■■■□□ 2.67
C9orf40-201ENST00000376854 UBR1Q8IWV7 1749 aa31.75■■■□□ 2.67
C9orf40-201ENST00000376854 ANKRD45Q5TZF3 282 aa31.74■■■□□ 2.67
C9orf40-201ENST00000376854 HSCBQ8IWL3 235 aa31.74■■■□□ 2.67
C9orf40-201ENST00000376854 SIRT1Q96EB6 747 aa31.74■■■□□ 2.67
C9orf40-201ENST00000376854 TWISTNBQ3B726 338 aaPredicted RBP31.74■■■□□ 2.67
C9orf40-201ENST00000376854 CFAP44Q96MT7 982 aa31.74■■■□□ 2.67
C9orf40-201ENST00000376854 CHMP5Q9NZZ3 219 aa31.74■■■□□ 2.67
C9orf40-201ENST00000376854 BMP2KLQ5H9B9 411 aa31.73■■■□□ 2.67
C9orf40-201ENST00000376854 ABCC4O15439 1325 aa31.72■■■□□ 2.67
C9orf40-201ENST00000376854 RBM25P49756 843 aaKnown RBP31.72■■■□□ 2.67
C9orf40-201ENST00000376854 MON2Q7Z3U7 1717 aa31.71■■■□□ 2.67
C9orf40-201ENST00000376854 ADAMTS13Q76LX8 1427 aa31.71■■■□□ 2.67
C9orf40-201ENST00000376854 DNAJC5Q9H3Z4 198 aa31.7■■■□□ 2.67
C9orf40-201ENST00000376854 C8orf58Q8NAV2 365 aa31.7■■■□□ 2.66
C9orf40-201ENST00000376854 LTKP29376 864 aa31.69■■■□□ 2.66
C9orf40-201ENST00000376854 MCM4P33991 863 aa31.69■■■□□ 2.66
C9orf40-201ENST00000376854 FAM83GA6ND36 823 aa31.67■■■□□ 2.66
C9orf40-201ENST00000376854 CEBPAP49715 358 aaPredicted RBP31.67■■■□□ 2.66
C9orf40-201ENST00000376854 NUTM2FA1L443 756 aa31.67■■■□□ 2.66
C9orf40-201ENST00000376854 SIRT2Q8IXJ6 389 aa31.67■■■□□ 2.66
C9orf40-201ENST00000376854 API5Q9BZZ5 524 aaKnown RBP31.66■■■□□ 2.66
C9orf40-201ENST00000376854 AKAP12Q02952 1782 aa31.66■■■□□ 2.66
C9orf40-201ENST00000376854 C3P01024 1663 aa31.66■■■□□ 2.66
C9orf40-201ENST00000376854 DCTN1Q14203 1278 aa31.64■■■□□ 2.66
C9orf40-201ENST00000376854 SNX21Q969T3 373 aa31.64■■■□□ 2.66
C9orf40-201ENST00000376854 ITSN1Q15811 1721 aa31.64■■■□□ 2.65
C9orf40-201ENST00000376854 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.63■■■□□ 2.65
C9orf40-201ENST00000376854 ZNF692Q9BU19 519 aaPredicted RBP31.63■■■□□ 2.65
C9orf40-201ENST00000376854 L1TD1Q5T7N2 865 aaKnown RBP31.62■■■□□ 2.65
C9orf40-201ENST00000376854 DLG5Q8TDM6 1919 aa31.61■■■□□ 2.65
C9orf40-201ENST00000376854 SLC26A8Q96RN1 970 aa31.61■■■□□ 2.65
C9orf40-201ENST00000376854 NCOA3Q9Y6Q9 1424 aa31.6■■■□□ 2.65
C9orf40-201ENST00000376854 PLPPR3Q6T4P5 718 aa31.59■■■□□ 2.65
C9orf40-201ENST00000376854 PLEKHG1Q9ULL1 1385 aa31.58■■■□□ 2.65
C9orf40-201ENST00000376854 ACEP12821 1306 aa31.57■■■□□ 2.64
C9orf40-201ENST00000376854 TBC1D9Q6ZT07 1266 aa31.57■■■□□ 2.64
C9orf40-201ENST00000376854 TTC21BQ7Z4L5 1316 aa31.57■■■□□ 2.64
C9orf40-201ENST00000376854 PTPRUQ92729 1446 aa31.56■■■□□ 2.64
C9orf40-201ENST00000376854 KIF24Q5T7B8 1368 aa31.56■■■□□ 2.64
C9orf40-201ENST00000376854 DDIT3P35638 169 aa31.55■■■□□ 2.64
C9orf40-201ENST00000376854 EIF4A2Q14240 407 aaKnown RBP31.55■■■□□ 2.64
C9orf40-201ENST00000376854 AEBP1Q8IUX7 1158 aa31.55■■■□□ 2.64
C9orf40-201ENST00000376854 SULT6B1Q6IMI4 303 aa31.54■■■□□ 2.64
C9orf40-201ENST00000376854 KIF2CQ99661 725 aa31.54■■■□□ 2.64
C9orf40-201ENST00000376854 HSP90AB1P08238 724 aaKnown RBP31.53■■■□□ 2.64
C9orf40-201ENST00000376854 TRAK2O60296 914 aa31.52■■■□□ 2.64
C9orf40-201ENST00000376854 NRKQ7Z2Y5 1582 aa31.52■■■□□ 2.64
C9orf40-201ENST00000376854 GZF1Q9H116 711 aaPredicted RBP31.52■■■□□ 2.64
C9orf40-201ENST00000376854 TOPAZ1Q8N9V7 1692 aa31.51■■■□□ 2.63
C9orf40-201ENST00000376854 INTS3Q68E01 1043 aaKnown RBP31.5■■■□□ 2.63
C9orf40-201ENST00000376854 FAM43AQ8N2R8 423 aa31.5■■■□□ 2.63
C9orf40-201ENST00000376854 PLEKHG3A1L390 1219 aa31.49■■■□□ 2.63
C9orf40-201ENST00000376854 GOLGA6L3A6NEY3 463 aa31.49■■■□□ 2.63
C9orf40-201ENST00000376854 DDX11L8A8MPP1 907 aa31.49■■■□□ 2.63
C9orf40-201ENST00000376854 CDC45O75419 566 aa31.49■■■□□ 2.63
C9orf40-201ENST00000376854 HAP1P54257 671 aaPredicted RBP31.49■■■□□ 2.63
C9orf40-201ENST00000376854 DCTPP1Q9H773 170 aa31.48■■■□□ 2.63
C9orf40-201ENST00000376854 OVOS2A0A0J9YW53 1432 aa31.48■■■□□ 2.63
C9orf40-201ENST00000376854 OVOS2Q6IE36 1432 aa31.48■■■□□ 2.63
C9orf40-201ENST00000376854 USP6P35125 1406 aa31.48■■■□□ 2.63
C9orf40-201ENST00000376854 CHL1O00533 1208 aa31.47■■■□□ 2.63
C9orf40-201ENST00000376854 SOX12O15370 315 aa31.47■■■□□ 2.63
C9orf40-201ENST00000376854 KRT24Q2M2I5 525 aa31.47■■■□□ 2.63
C9orf40-201ENST00000376854 FSD2A1L4K1 749 aa31.47■■■□□ 2.63
C9orf40-201ENST00000376854 CIZ1Q9ULV3 898 aaPredicted RBP31.47■■■□□ 2.63
C9orf40-201ENST00000376854 MCM10Q7L590 875 aa31.46■■■□□ 2.63
C9orf40-201ENST00000376854 PLEKHM2Q8IWE5 1019 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms