RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 PLSCR1O15162 318 aa18.96■□□□□ 0.63
CLCN6-205ENST00000376492 CPSF1Q10570 1443 aaKnown RBP18.95■□□□□ 0.62
CLCN6-205ENST00000376492 MARCH10Q8NA82 808 aaPredicted RBP18.95■□□□□ 0.62
CLCN6-205ENST00000376492 BCL11BQ9C0K0 894 aaPredicted RBP18.95■□□□□ 0.62
CLCN6-205ENST00000376492 COL18A1P39060 1754 aa18.95■□□□□ 0.62
CLCN6-205ENST00000376492 WDR17Q8IZU2 1322 aa18.95■□□□□ 0.62
CLCN6-205ENST00000376492 CASZ1Q86V15 1759 aa18.94■□□□□ 0.62
CLCN6-205ENST00000376492 PROM2Q8N271 834 aa18.94■□□□□ 0.62
CLCN6-205ENST00000376492 SBF2Q86WG5 1849 aa18.93■□□□□ 0.62
CLCN6-205ENST00000376492 SOX12O15370 315 aa18.93■□□□□ 0.62
CLCN6-205ENST00000376492 WNK3Q9BYP7 1800 aa18.93■□□□□ 0.62
CLCN6-205ENST00000376492 ZBTB7AO95365 584 aa18.92■□□□□ 0.62
CLCN6-205ENST00000376492 ARHGEF25Q86VW2 580 aa18.91■□□□□ 0.62
CLCN6-205ENST00000376492 BCL9O00512 1426 aa18.91■□□□□ 0.62
CLCN6-205ENST00000376492 DCAF8L1A6NGE4 600 aa18.9■□□□□ 0.62
CLCN6-205ENST00000376492 TTC21BQ7Z4L5 1316 aa18.9■□□□□ 0.62
CLCN6-205ENST00000376492 CSB-PGBD3P0DP91 1061 aa18.89■□□□□ 0.61
CLCN6-205ENST00000376492 EVC2Q86UK5 1308 aa18.89■□□□□ 0.61
CLCN6-205ENST00000376492 UTRNP46939 3433 aa18.89■□□□□ 0.61
CLCN6-205ENST00000376492 MYOM1P52179 1685 aa18.89■□□□□ 0.61
CLCN6-205ENST00000376492 PTGER2P43116 358 aa18.88■□□□□ 0.61
CLCN6-205ENST00000376492 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
CLCN6-205ENST00000376492 TXNRD1Q16881 649 aa18.88■□□□□ 0.61
CLCN6-205ENST00000376492 CDCA7Q9BWT1 371 aaPredicted RBP18.88■□□□□ 0.61
CLCN6-205ENST00000376492 CARD10Q9BWT7 1032 aa18.88■□□□□ 0.61
CLCN6-205ENST00000376492 ATF5Q9Y2D1 282 aaPredicted RBP18.88■□□□□ 0.61
CLCN6-205ENST00000376492 NFAT5O94916 1531 aa18.87■□□□□ 0.61
CLCN6-205ENST00000376492 AKAP12Q02952 1782 aa18.86■□□□□ 0.61
CLCN6-205ENST00000376492 KCNH5Q8NCM2 988 aa18.86■□□□□ 0.61
CLCN6-205ENST00000376492 L3MBTL2Q969R5 705 aa18.86■□□□□ 0.61
CLCN6-205ENST00000376492 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
CLCN6-205ENST00000376492 STK32BQ9NY57 414 aa18.85■□□□□ 0.61
CLCN6-205ENST00000376492 TNS2Q63HR2 1409 aa18.84■□□□□ 0.61
CLCN6-205ENST00000376492 RGPD5Q99666 1765 aa18.84■□□□□ 0.61
CLCN6-205ENST00000376492 TTC21AQ8NDW8 1320 aa18.83■□□□□ 0.61
CLCN6-205ENST00000376492 EXOC5O00471 708 aa18.83■□□□□ 0.6
CLCN6-205ENST00000376492 SLC15A2Q16348 729 aa18.83■□□□□ 0.6
CLCN6-205ENST00000376492 ZNF692Q9BU19 519 aaPredicted RBP18.83■□□□□ 0.6
CLCN6-205ENST00000376492 FHDC1Q9C0D6 1143 aaPredicted RBP18.82■□□□□ 0.6
CLCN6-205ENST00000376492 KTN1Q86UP2 1357 aaKnown RBP18.81■□□□□ 0.6
CLCN6-205ENST00000376492 CCDC7Q96M83 1385 aa18.81■□□□□ 0.6
CLCN6-205ENST00000376492 ACSBG1Q96GR2 724 aa18.81■□□□□ 0.6
CLCN6-205ENST00000376492 ROCK2O75116 1388 aaKnown RBP18.81■□□□□ 0.6
CLCN6-205ENST00000376492 ABCC6O95255 1503 aa18.79■□□□□ 0.6
CLCN6-205ENST00000376492 NHSQ6T4R5 1651 aa18.79■□□□□ 0.6
CLCN6-205ENST00000376492 ZNF784Q8NCA9 323 aaPredicted RBP18.79■□□□□ 0.6
CLCN6-205ENST00000376492 SGIP1Q9BQI5 828 aa18.79■□□□□ 0.6
CLCN6-205ENST00000376492 SYT17Q9BSW7 474 aa18.79■□□□□ 0.6
CLCN6-205ENST00000376492 MTFR1LQ9H019 292 aa18.79■□□□□ 0.6
CLCN6-205ENST00000376492 ERBB3P21860 1342 aa18.78■□□□□ 0.6
CLCN6-205ENST00000376492 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.78■□□□□ 0.6
CLCN6-205ENST00000376492 SIN3AQ96ST3 1273 aa18.78■□□□□ 0.6
CLCN6-205ENST00000376492 NLRP2Q9NX02 1062 aa18.77■□□□□ 0.6
CLCN6-205ENST00000376492 PAPPAQ13219 1627 aa18.77■□□□□ 0.6
CLCN6-205ENST00000376492 NME9Q86XW9 330 aa18.76■□□□□ 0.59
CLCN6-205ENST00000376492 MON2Q7Z3U7 1717 aa18.75■□□□□ 0.59
CLCN6-205ENST00000376492 ZNF827Q17R98 1081 aa18.75■□□□□ 0.59
CLCN6-205ENST00000376492 USP31Q70CQ4 1352 aa18.75■□□□□ 0.59
CLCN6-205ENST00000376492 CD163L1Q9NR16 1453 aa18.74■□□□□ 0.59
CLCN6-205ENST00000376492 SBNO2Q9Y2G9 1366 aa18.74■□□□□ 0.59
CLCN6-205ENST00000376492 IL2RBP14784 551 aa18.73■□□□□ 0.59
CLCN6-205ENST00000376492 NEUROD1Q13562 356 aa18.72■□□□□ 0.59
CLCN6-205ENST00000376492 ARXQ96QS3 562 aa18.72■□□□□ 0.59
CLCN6-205ENST00000376492 LRRC4BQ9NT99 713 aa18.72■□□□□ 0.59
CLCN6-205ENST00000376492 USP54Q70EL1 1684 aa18.71■□□□□ 0.59
CLCN6-205ENST00000376492 ANKRD24Q8TF21 1146 aa18.71■□□□□ 0.59
CLCN6-205ENST00000376492 BTAF1O14981 1849 aa18.7■□□□□ 0.58
CLCN6-205ENST00000376492 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
CLCN6-205ENST00000376492 LTN1O94822 1766 aa18.68■□□□□ 0.58
CLCN6-205ENST00000376492 TMC1Q8TDI8 760 aa18.68■□□□□ 0.58
CLCN6-205ENST00000376492 SLC12A5Q9H2X9 1139 aa18.67■□□□□ 0.58
CLCN6-205ENST00000376492 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
CLCN6-205ENST00000376492 GOLGB1Q14789 3259 aaKnown RBP18.66■□□□□ 0.58
CLCN6-205ENST00000376492 EDC4Q6P2E9 1401 aaKnown RBP18.66■□□□□ 0.58
CLCN6-205ENST00000376492 DDX54Q8TDD1 881 aaKnown RBP18.65■□□□□ 0.58
CLCN6-205ENST00000376492 A0A1W2PP64 1363 aa18.65■□□□□ 0.58
CLCN6-205ENST00000376492 KCNQ4P56696 695 aa18.64■□□□□ 0.57
CLCN6-205ENST00000376492 HDGFL2Q7Z4V5 671 aaPredicted RBP18.64■□□□□ 0.57
CLCN6-205ENST00000376492 KLHL34Q8N239 644 aa18.64■□□□□ 0.57
CLCN6-205ENST00000376492 LTV1Q96GA3 475 aaPredicted RBP18.64■□□□□ 0.57
CLCN6-205ENST00000376492 SENP3-EIF4A1A0A087X0R7 540 aa18.63■□□□□ 0.57
CLCN6-205ENST00000376492 CARD11Q9BXL7 1154 aa18.63■□□□□ 0.57
CLCN6-205ENST00000376492 PNPLA7Q6ZV29 1317 aa18.63■□□□□ 0.57
CLCN6-205ENST00000376492 C1QTNF8P60827 252 aa18.62■□□□□ 0.57
CLCN6-205ENST00000376492 GPR162Q16538 588 aa18.62■□□□□ 0.57
CLCN6-205ENST00000376492 SLC27A3Q5K4L6 730 aa18.61■□□□□ 0.57
CLCN6-205ENST00000376492 IP6K1Q92551 441 aa18.61■□□□□ 0.57
CLCN6-205ENST00000376492 SYTL4Q96C24 671 aaPredicted RBP18.6■□□□□ 0.57
CLCN6-205ENST00000376492 NSD2O96028 1365 aa18.59■□□□□ 0.57
CLCN6-205ENST00000376492 CHD4Q14839 1912 aa18.59■□□□□ 0.57
CLCN6-205ENST00000376492 PRIM1P49642 420 aaKnown RBP18.59■□□□□ 0.57
CLCN6-205ENST00000376492 PELP1Q8IZL8 1130 aaKnown RBP18.59■□□□□ 0.57
CLCN6-205ENST00000376492 NLGN2Q8NFZ4 835 aa18.59■□□□□ 0.57
CLCN6-205ENST00000376492 TERF2IPQ9NYB0 399 aa18.59■□□□□ 0.57
CLCN6-205ENST00000376492 TFCP2L1Q9NZI6 479 aa18.59■□□□□ 0.57
CLCN6-205ENST00000376492 ANKRD36BQ8N2N9 1353 aa18.58■□□□□ 0.57
CLCN6-205ENST00000376492 POLD1P28340 1107 aa18.58■□□□□ 0.56
CLCN6-205ENST00000376492 SLC16A10Q8TF71 515 aa18.58■□□□□ 0.56
CLCN6-205ENST00000376492 MAP3K19Q56UN5 1328 aa18.57■□□□□ 0.56
CLCN6-205ENST00000376492 FBLN1P23142 703 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 773.7 ms