RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 ANKRD36BQ8N2N9 1353 aa14.28□□□□□ -0.12
TM9SF2-201ENST00000376387 SIRT2Q8IXJ6 389 aa14.28□□□□□ -0.12
TM9SF2-201ENST00000376387 CCDC173Q0VFZ6 552 aa14.27□□□□□ -0.12
TM9SF2-201ENST00000376387 PKP1Q13835 747 aa14.27□□□□□ -0.12
TM9SF2-201ENST00000376387 IPO4Q8TEX9 1081 aaKnown RBP14.27□□□□□ -0.12
TM9SF2-201ENST00000376387 ZBTB7BO15156 539 aaPredicted RBP14.27□□□□□ -0.13
TM9SF2-201ENST00000376387 ABCC11Q96J66 1382 aa14.27□□□□□ -0.13
TM9SF2-201ENST00000376387 COL3A1P02461 1466 aaPredicted RBP14.26□□□□□ -0.13
TM9SF2-201ENST00000376387 ADGRB3O60242 1522 aa14.26□□□□□ -0.13
TM9SF2-201ENST00000376387 TPM2P07951 284 aa14.26□□□□□ -0.13
TM9SF2-201ENST00000376387 KIF16BQ96L93 1317 aa14.26□□□□□ -0.13
TM9SF2-201ENST00000376387 FANCAO15360 1455 aa14.26□□□□□ -0.13
TM9SF2-201ENST00000376387 IPO8O15397 1037 aaKnown RBP14.26□□□□□ -0.13
TM9SF2-201ENST00000376387 THUMPD2Q9BTF0 503 aaKnown RBP14.26□□□□□ -0.13
TM9SF2-201ENST00000376387 FBLN1P23142 703 aa14.25□□□□□ -0.13
TM9SF2-201ENST00000376387 MCTP1Q6DN14 999 aa14.25□□□□□ -0.13
TM9SF2-201ENST00000376387 ZSCAN30Q86W11 494 aa14.25□□□□□ -0.13
TM9SF2-201ENST00000376387 CHAMP1Q96JM3 812 aa14.25□□□□□ -0.13
TM9SF2-201ENST00000376387 A0A1W2PP64 1363 aa14.25□□□□□ -0.13
TM9SF2-201ENST00000376387 PPLO60437 1756 aa14.25□□□□□ -0.13
TM9SF2-201ENST00000376387 NCLP19338 710 aaKnown RBP14.25□□□□□ -0.13
TM9SF2-201ENST00000376387 KLHL40Q2TBA0 621 aa14.25□□□□□ -0.13
TM9SF2-201ENST00000376387 ELL2O00472 640 aaPredicted RBP14.24□□□□□ -0.13
TM9SF2-201ENST00000376387 TSPYL6Q8N831 410 aa14.24□□□□□ -0.13
TM9SF2-201ENST00000376387 EVC2Q86UK5 1308 aa14.24□□□□□ -0.13
TM9SF2-201ENST00000376387 RIMBP3CA6NJZ7 1639 aa14.24□□□□□ -0.13
TM9SF2-201ENST00000376387 RIMBP3BA6NNM3 1639 aa14.24□□□□□ -0.13
TM9SF2-201ENST00000376387 RIMBP3Q9UFD9 1639 aa14.24□□□□□ -0.13
TM9SF2-201ENST00000376387 GSPT1P15170 499 aaKnown RBP14.24□□□□□ -0.13
TM9SF2-201ENST00000376387 CAVIN1Q6NZI2 390 aaKnown RBP14.24□□□□□ -0.13
TM9SF2-201ENST00000376387 ATAD2Q6PL18 1390 aa14.24□□□□□ -0.13
TM9SF2-201ENST00000376387 IL16Q14005 1332 aa14.23□□□□□ -0.13
TM9SF2-201ENST00000376387 RBSNQ9H1K0 784 aa14.23□□□□□ -0.13
TM9SF2-201ENST00000376387 OFD1O75665 1012 aa14.23□□□□□ -0.13
TM9SF2-201ENST00000376387 NSD2O96028 1365 aa14.23□□□□□ -0.13
TM9SF2-201ENST00000376387 GLI2P10070 1586 aa14.22□□□□□ -0.13
TM9SF2-201ENST00000376387 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.22□□□□□ -0.13
TM9SF2-201ENST00000376387 RBM27Q9P2N5 1060 aaKnown RBP14.22□□□□□ -0.13
TM9SF2-201ENST00000376387 MED14O60244 1454 aa14.22□□□□□ -0.13
TM9SF2-201ENST00000376387 PATL2C9JE40 543 aaKnown RBP14.22□□□□□ -0.13
TM9SF2-201ENST00000376387 FYB1O15117 783 aa14.22□□□□□ -0.13
TM9SF2-201ENST00000376387 ZSCAN23Q3MJ62 389 aa14.22□□□□□ -0.13
TM9SF2-201ENST00000376387 ALDH1L2Q3SY69 923 aa14.22□□□□□ -0.13
TM9SF2-201ENST00000376387 C16orf71Q8IYS4 520 aaPredicted RBP14.22□□□□□ -0.13
TM9SF2-201ENST00000376387 PDCL3Q9H2J4 239 aa14.22□□□□□ -0.13
TM9SF2-201ENST00000376387 STK26Q9P289 416 aa14.22□□□□□ -0.13
TM9SF2-201ENST00000376387 GOLGA6L22H0YM25 854 aa14.21□□□□□ -0.13
TM9SF2-201ENST00000376387 CLEC17AQ6ZS10 378 aa14.21□□□□□ -0.13
TM9SF2-201ENST00000376387 GCC1Q96CN9 775 aa14.21□□□□□ -0.13
TM9SF2-201ENST00000376387 MSNP26038 577 aaKnown RBP14.21□□□□□ -0.13
TM9SF2-201ENST00000376387 MRPL50Q8N5N7 158 aaKnown RBP14.21□□□□□ -0.13
TM9SF2-201ENST00000376387 LMBRD1Q9NUN5 540 aa14.21□□□□□ -0.13
TM9SF2-201ENST00000376387 ARHGEF28Q8N1W1 1705 aaKnown RBP14.21□□□□□ -0.13
TM9SF2-201ENST00000376387 PTMSP20962 102 aa14.21□□□□□ -0.14
TM9SF2-201ENST00000376387 R3HCC1Q9Y3T6 440 aaKnown RBP14.21□□□□□ -0.14
TM9SF2-201ENST00000376387 SRPK2P78362 688 aaKnown RBP14.2□□□□□ -0.14
TM9SF2-201ENST00000376387 XPCQ01831 940 aaPredicted RBP14.2□□□□□ -0.14
TM9SF2-201ENST00000376387 DIAPH1O60610 1272 aaKnown RBP14.2□□□□□ -0.14
TM9SF2-201ENST00000376387 VAMP4O75379 141 aa14.2□□□□□ -0.14
TM9SF2-201ENST00000376387 PRIM1P49642 420 aaKnown RBP14.2□□□□□ -0.14
TM9SF2-201ENST00000376387 CDC45O75419 566 aa14.19□□□□□ -0.14
TM9SF2-201ENST00000376387 PLCB2Q00722 1185 aa14.19□□□□□ -0.14
TM9SF2-201ENST00000376387 ZGPATQ8N5A5 531 aaKnown RBP14.19□□□□□ -0.14
TM9SF2-201ENST00000376387 PHACTR3Q96KR7 559 aa14.19□□□□□ -0.14
TM9SF2-201ENST00000376387 NPATQ14207 1427 aa14.19□□□□□ -0.14
TM9SF2-201ENST00000376387 ZNF445P59923 1031 aa14.19□□□□□ -0.14
TM9SF2-201ENST00000376387 GGT6Q6P531 493 aa14.19□□□□□ -0.14
TM9SF2-201ENST00000376387 CAMSAP1Q5T5Y3 1602 aa14.19□□□□□ -0.14
TM9SF2-201ENST00000376387 PRKAR2BP31323 418 aa14.19□□□□□ -0.14
TM9SF2-201ENST00000376387 GPT2Q8TD30 523 aa14.19□□□□□ -0.14
TM9SF2-201ENST00000376387 OTUD7AQ8TE49 926 aaPredicted RBP14.19□□□□□ -0.14
TM9SF2-201ENST00000376387 ANP32BQ92688 251 aaKnown RBP14.19□□□□□ -0.14
TM9SF2-201ENST00000376387 IBTKQ9P2D0 1353 aaPredicted RBP14.18□□□□□ -0.14
TM9SF2-201ENST00000376387 VGLL3A8MV65 326 aa14.18□□□□□ -0.14
TM9SF2-201ENST00000376387 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
TM9SF2-201ENST00000376387 PLEKHM2Q8IWE5 1019 aa14.18□□□□□ -0.14
TM9SF2-201ENST00000376387 CYP2E1P05181 493 aaPredicted RBP14.18□□□□□ -0.14
TM9SF2-201ENST00000376387 FAM43BQ6ZT52 329 aaPredicted RBP14.18□□□□□ -0.14
TM9SF2-201ENST00000376387 NSFL1CQ9UNZ2 370 aaKnown RBP14.18□□□□□ -0.14
TM9SF2-201ENST00000376387 PRPF40AO75400 957 aaKnown RBP14.18□□□□□ -0.14
TM9SF2-201ENST00000376387 HMOX1P09601 288 aa14.18□□□□□ -0.14
TM9SF2-201ENST00000376387 CALD1Q05682 793 aaKnown RBP14.18□□□□□ -0.14
TM9SF2-201ENST00000376387 FAM13BQ9NYF5 915 aa14.18□□□□□ -0.14
TM9SF2-201ENST00000376387 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.18□□□□□ -0.14
TM9SF2-201ENST00000376387 LRRC7Q96NW7 1537 aa14.17□□□□□ -0.14
TM9SF2-201ENST00000376387 ARID3AQ99856 593 aa14.17□□□□□ -0.14
TM9SF2-201ENST00000376387 ZDHHC9Q9Y397 364 aa14.17□□□□□ -0.14
TM9SF2-201ENST00000376387 KIDINS220Q9ULH0 1771 aa14.17□□□□□ -0.14
TM9SF2-201ENST00000376387 KNDC1Q76NI1 1749 aa14.16□□□□□ -0.14
TM9SF2-201ENST00000376387 FOXD4L5Q5VV16 416 aaPredicted RBP14.16□□□□□ -0.14
TM9SF2-201ENST00000376387 FOXD4L4Q8WXT5 416 aaPredicted RBP14.16□□□□□ -0.14
TM9SF2-201ENST00000376387 MINK1Q8N4C8 1332 aaPredicted RBP14.16□□□□□ -0.14
TM9SF2-201ENST00000376387 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.16□□□□□ -0.14
TM9SF2-201ENST00000376387 USP26Q9BXU7 913 aa14.16□□□□□ -0.14
TM9SF2-201ENST00000376387 RABEP1Q15276 862 aa14.15□□□□□ -0.14
TM9SF2-201ENST00000376387 NOL7Q9UMY1 257 aaKnown RBP14.15□□□□□ -0.14
TM9SF2-201ENST00000376387 TEX2Q8IWB9 1127 aa14.15□□□□□ -0.14
TM9SF2-201ENST00000376387 ABCC4O15439 1325 aa14.15□□□□□ -0.14
TM9SF2-201ENST00000376387 PTCH1Q13635 1447 aa14.15□□□□□ -0.14
TM9SF2-201ENST00000376387 ARHGAP31Q2M1Z3 1444 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms