RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 SURF6O75683 361 aaKnown RBP12.42□□□□□ -0.42
ZNF550-203ENST00000376230 SIL1Q9H173 461 aa12.42□□□□□ -0.42
ZNF550-203ENST00000376230 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
ZNF550-203ENST00000376230 POGZQ7Z3K3 1410 aa12.42□□□□□ -0.42
ZNF550-203ENST00000376230 MYL6BP14649 208 aa12.41□□□□□ -0.42
ZNF550-203ENST00000376230 KCNA6P17658 529 aa12.41□□□□□ -0.42
ZNF550-203ENST00000376230 NUTM1Q86Y26 1132 aa12.41□□□□□ -0.42
ZNF550-203ENST00000376230 CHMP4BQ9H444 224 aaKnown RBP12.41□□□□□ -0.42
ZNF550-203ENST00000376230 CHMP5Q9NZZ3 219 aa12.41□□□□□ -0.42
ZNF550-203ENST00000376230 USP19O94966 1318 aa12.41□□□□□ -0.42
ZNF550-203ENST00000376230 METP08581 1390 aa12.41□□□□□ -0.42
ZNF550-203ENST00000376230 CLTCL1P53675 1640 aa12.41□□□□□ -0.42
ZNF550-203ENST00000376230 RIMS2Q9UQ26 1411 aa12.41□□□□□ -0.42
ZNF550-203ENST00000376230 GOLGA6L22H0YM25 854 aa12.41□□□□□ -0.42
ZNF550-203ENST00000376230 ZFYVE16Q7Z3T8 1539 aa12.41□□□□□ -0.42
ZNF550-203ENST00000376230 MTHFSDQ2M296 383 aaKnown RBP12.4□□□□□ -0.42
ZNF550-203ENST00000376230 UBE2Q2Q8WVN8 375 aa12.4□□□□□ -0.42
ZNF550-203ENST00000376230 TBC1D32Q96NH3 1257 aa12.4□□□□□ -0.42
ZNF550-203ENST00000376230 C9orf78Q9NZ63 289 aaPredicted RBP12.4□□□□□ -0.42
ZNF550-203ENST00000376230 TTC21BQ7Z4L5 1316 aa12.4□□□□□ -0.42
ZNF550-203ENST00000376230 HMMRO75330 724 aa12.4□□□□□ -0.42
ZNF550-203ENST00000376230 CABLES1Q8TDN4 633 aa12.4□□□□□ -0.42
ZNF550-203ENST00000376230 ZMYM3Q14202 1370 aa12.4□□□□□ -0.42
ZNF550-203ENST00000376230 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
ZNF550-203ENST00000376230 UPF3BQ9BZI7 483 aaKnown RBP12.39□□□□□ -0.43
ZNF550-203ENST00000376230 C1orf141Q5JVX7 400 aa12.39□□□□□ -0.43
ZNF550-203ENST00000376230 ZNF530Q6P9A1 599 aaPredicted RBP12.39□□□□□ -0.43
ZNF550-203ENST00000376230 PROSER2Q86WR7 435 aaPredicted RBP12.39□□□□□ -0.43
ZNF550-203ENST00000376230 TRMT2AQ8IZ69 625 aaKnown RBP12.39□□□□□ -0.43
ZNF550-203ENST00000376230 TRPM1Q7Z4N2 1603 aa12.39□□□□□ -0.43
ZNF550-203ENST00000376230 CHRNA2Q15822 529 aa12.38□□□□□ -0.43
ZNF550-203ENST00000376230 THEMISQ8N1K5 641 aaPredicted RBP12.38□□□□□ -0.43
ZNF550-203ENST00000376230 CFAP44Q96MT7 982 aa12.38□□□□□ -0.43
ZNF550-203ENST00000376230 CCDC85AQ96PX6 553 aaPredicted RBP12.38□□□□□ -0.43
ZNF550-203ENST00000376230 FOSBP53539 338 aa12.38□□□□□ -0.43
ZNF550-203ENST00000376230 DDX49Q9Y6V7 483 aaKnown RBP12.38□□□□□ -0.43
ZNF550-203ENST00000376230 EIF2AK4Q9P2K8 1649 aaKnown RBP12.38□□□□□ -0.43
ZNF550-203ENST00000376230 MAP3K19Q56UN5 1328 aa12.38□□□□□ -0.43
ZNF550-203ENST00000376230 IL13P35225 146 aa12.38□□□□□ -0.43
ZNF550-203ENST00000376230 MCTP1Q6DN14 999 aa12.38□□□□□ -0.43
ZNF550-203ENST00000376230 MRPL50Q8N5N7 158 aaKnown RBP12.38□□□□□ -0.43
ZNF550-203ENST00000376230 FGD1P98174 961 aa12.37□□□□□ -0.43
ZNF550-203ENST00000376230 PLEKHF1Q96S99 279 aa12.37□□□□□ -0.43
ZNF550-203ENST00000376230 ZBTB40Q9NUA8 1239 aa12.37□□□□□ -0.43
ZNF550-203ENST00000376230 CROCC2H7BZ55 1655 aa12.37□□□□□ -0.43
ZNF550-203ENST00000376230 UBTFL1P0CB47 393 aaPredicted RBP12.37□□□□□ -0.43
ZNF550-203ENST00000376230 NEK4P51957 841 aa12.37□□□□□ -0.43
ZNF550-203ENST00000376230 TBC1D9Q6ZT07 1266 aa12.37□□□□□ -0.43
ZNF550-203ENST00000376230 EYA1Q99502 592 aa12.37□□□□□ -0.43
ZNF550-203ENST00000376230 CHAMP1Q96JM3 812 aa12.37□□□□□ -0.43
ZNF550-203ENST00000376230 SYTL4Q96C24 671 aaPredicted RBP12.36□□□□□ -0.43
ZNF550-203ENST00000376230 GRPEL1Q9HAV7 217 aa12.36□□□□□ -0.43
ZNF550-203ENST00000376230 PRR36Q9H6K5 1346 aa12.36□□□□□ -0.43
ZNF550-203ENST00000376230 SLC39A6Q13433 755 aa12.36□□□□□ -0.43
ZNF550-203ENST00000376230 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
ZNF550-203ENST00000376230 LRRFIP2Q9Y608 721 aaKnown RBP12.36□□□□□ -0.43
ZNF550-203ENST00000376230 PPFIA3O75145 1194 aa12.35□□□□□ -0.43
ZNF550-203ENST00000376230 KIAA1211Q6ZU35 1233 aa12.35□□□□□ -0.43
ZNF550-203ENST00000376230 TRPM2O94759 1503 aa12.35□□□□□ -0.43
ZNF550-203ENST00000376230 CDC45O75419 566 aa12.35□□□□□ -0.43
ZNF550-203ENST00000376230 PHAXQ9H814 394 aaKnown RBP12.35□□□□□ -0.43
ZNF550-203ENST00000376230 STRN4Q9NRL3 753 aa12.35□□□□□ -0.43
ZNF550-203ENST00000376230 GBP4Q96PP9 640 aa12.35□□□□□ -0.43
ZNF550-203ENST00000376230 TSPOAP1O95153 1857 aa12.35□□□□□ -0.43
ZNF550-203ENST00000376230 TNRQ92752 1358 aa12.34□□□□□ -0.43
ZNF550-203ENST00000376230 FAM177BA6PVY3 158 aa12.34□□□□□ -0.43
ZNF550-203ENST00000376230 KDM4AO75164 1064 aa12.34□□□□□ -0.43
ZNF550-203ENST00000376230 ORAI2Q96SN7 254 aa12.34□□□□□ -0.43
ZNF550-203ENST00000376230 E9PCH4 1651 aa12.34□□□□□ -0.43
ZNF550-203ENST00000376230 INSRP06213 1382 aa12.34□□□□□ -0.43
ZNF550-203ENST00000376230 SRGAP3O43295 1099 aa12.34□□□□□ -0.43
ZNF550-203ENST00000376230 TAF7Q15545 349 aaPredicted RBP12.34□□□□□ -0.43
ZNF550-203ENST00000376230 RNF214Q8ND24 703 aa12.34□□□□□ -0.43
ZNF550-203ENST00000376230 MRE11P49959 708 aa12.34□□□□□ -0.43
ZNF550-203ENST00000376230 DDX11L8A8MPP1 907 aa12.33□□□□□ -0.44
ZNF550-203ENST00000376230 ZBTB7BO15156 539 aaPredicted RBP12.33□□□□□ -0.44
ZNF550-203ENST00000376230 CCDC27Q2M243 656 aa12.33□□□□□ -0.44
ZNF550-203ENST00000376230 PHF8Q9UPP1 1060 aa12.33□□□□□ -0.44
ZNF550-203ENST00000376230 UHRF1BP1LA0JNW5 1464 aa12.33□□□□□ -0.44
ZNF550-203ENST00000376230 ESPNB1AK53 854 aa12.33□□□□□ -0.44
ZNF550-203ENST00000376230 GNAI2P04899 355 aa12.33□□□□□ -0.44
ZNF550-203ENST00000376230 PTMAP06454 111 aaKnown RBP12.33□□□□□ -0.44
ZNF550-203ENST00000376230 RBM10P98175 930 aaKnown RBP12.33□□□□□ -0.44
ZNF550-203ENST00000376230 GAS2L2Q8NHY3 880 aa12.33□□□□□ -0.44
ZNF550-203ENST00000376230 GNAT3A8MTJ3 354 aa12.32□□□□□ -0.44
ZNF550-203ENST00000376230 KCNQ3O43525 872 aa12.32□□□□□ -0.44
ZNF550-203ENST00000376230 SSFA2P28290 1259 aa12.32□□□□□ -0.44
ZNF550-203ENST00000376230 HSPA2P54652 639 aa12.32□□□□□ -0.44
ZNF550-203ENST00000376230 FLIIQ13045 1269 aa12.32□□□□□ -0.44
ZNF550-203ENST00000376230 CCDC30Q5VVM6 783 aa12.32□□□□□ -0.44
ZNF550-203ENST00000376230 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
ZNF550-203ENST00000376230 PTCD1O75127 700 aaKnown RBP12.32□□□□□ -0.44
ZNF550-203ENST00000376230 MSNP26038 577 aaKnown RBP12.32□□□□□ -0.44
ZNF550-203ENST00000376230 TNPO1Q92973 898 aaKnown RBP12.32□□□□□ -0.44
ZNF550-203ENST00000376230 ANTXR1Q9H6X2 564 aa12.32□□□□□ -0.44
ZNF550-203ENST00000376230 POLR1AO95602 1720 aaPredicted RBP12.32□□□□□ -0.44
ZNF550-203ENST00000376230 IQGAP3Q86VI3 1631 aa12.32□□□□□ -0.44
ZNF550-203ENST00000376230 RIC3Q7Z5B4 369 aa12.32□□□□□ -0.44
ZNF550-203ENST00000376230 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
ZNF550-203ENST00000376230 BTBD11A6QL63 1104 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms