RNA–Protein interactions for RNA: ENST00000375635.6

C6orf48-202, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-202ENST00000375635 COG3Q96JB2 828 aa18.43■□□□□ 0.54
C6orf48-202ENST00000375635 ONECUT3O60422 494 aaPredicted RBP18.42■□□□□ 0.54
C6orf48-202ENST00000375635 FBLN1P23142 703 aa18.42■□□□□ 0.54
C6orf48-202ENST00000375635 ABCC6O95255 1503 aa18.42■□□□□ 0.54
C6orf48-202ENST00000375635 LARP1Q6PKG0 1096 aaKnown RBP18.41■□□□□ 0.54
C6orf48-202ENST00000375635 ZBTB7CA1YPR0 619 aa18.4■□□□□ 0.54
C6orf48-202ENST00000375635 SPATA31A1Q5TZJ5 1347 aa18.4■□□□□ 0.54
C6orf48-202ENST00000375635 STRN4Q9NRL3 753 aa18.39■□□□□ 0.53
C6orf48-202ENST00000375635 CGNL1Q0VF96 1302 aa18.39■□□□□ 0.53
C6orf48-202ENST00000375635 CCDC9Q9Y3X0 531 aaKnown RBP18.38■□□□□ 0.53
C6orf48-202ENST00000375635 THSD7AQ9UPZ6 1657 aa18.38■□□□□ 0.53
C6orf48-202ENST00000375635 ANKRD26Q9UPS8 1709 aa18.37■□□□□ 0.53
C6orf48-202ENST00000375635 PER1O15534 1290 aaPredicted RBP18.37■□□□□ 0.53
C6orf48-202ENST00000375635 MAP3K19Q56UN5 1328 aa18.37■□□□□ 0.53
C6orf48-202ENST00000375635 BRWD3Q6RI45 1802 aa18.37■□□□□ 0.53
C6orf48-202ENST00000375635 EVA1CP58658 441 aa18.36■□□□□ 0.53
C6orf48-202ENST00000375635 CRB1P82279 1406 aa18.35■□□□□ 0.53
C6orf48-202ENST00000375635 WDR17Q8IZU2 1322 aa18.35■□□□□ 0.53
C6orf48-202ENST00000375635 FAM98CQ17RN3 349 aaKnown RBP18.35■□□□□ 0.53
C6orf48-202ENST00000375635 SEPT12Q8IYM1 358 aa18.35■□□□□ 0.53
C6orf48-202ENST00000375635 IP6K1Q92551 441 aa18.35■□□□□ 0.53
C6orf48-202ENST00000375635 PEAK1Q9H792 1746 aa18.35■□□□□ 0.53
C6orf48-202ENST00000375635 RRS1Q15050 365 aaKnown RBP18.34■□□□□ 0.53
C6orf48-202ENST00000375635 AMER1Q5JTC6 1135 aaPredicted RBP18.34■□□□□ 0.53
C6orf48-202ENST00000375635 ERBB3P21860 1342 aa18.33■□□□□ 0.53
C6orf48-202ENST00000375635 BARGINQ6ZT62 677 aa18.33■□□□□ 0.52
C6orf48-202ENST00000375635 EP400Q96L91 3159 aa18.33■□□□□ 0.52
C6orf48-202ENST00000375635 BLMP54132 1417 aaPredicted RBP18.32■□□□□ 0.52
C6orf48-202ENST00000375635 HOXC9P31274 260 aa18.32■□□□□ 0.52
C6orf48-202ENST00000375635 ZEB1P37275 1124 aaPredicted RBP18.32■□□□□ 0.52
C6orf48-202ENST00000375635 TCP11L2Q8N4U5 519 aa18.32■□□□□ 0.52
C6orf48-202ENST00000375635 NSD2O96028 1365 aa18.31■□□□□ 0.52
C6orf48-202ENST00000375635 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
C6orf48-202ENST00000375635 RTL1A6NKG5 1358 aa18.3■□□□□ 0.52
C6orf48-202ENST00000375635 MAP2P11137 1827 aaKnown RBP18.3■□□□□ 0.52
C6orf48-202ENST00000375635 CARD10Q9BWT7 1032 aa18.3■□□□□ 0.52
C6orf48-202ENST00000375635 KNSTRNQ9Y448 316 aa18.3■□□□□ 0.52
C6orf48-202ENST00000375635 TOM1L2Q6ZVM7 507 aa18.29■□□□□ 0.52
C6orf48-202ENST00000375635 ANKRD24Q8TF21 1146 aa18.29■□□□□ 0.52
C6orf48-202ENST00000375635 THRAP3Q9Y2W1 955 aaKnown RBP18.29■□□□□ 0.52
C6orf48-202ENST00000375635 EMILIN1Q9Y6C2 1016 aa18.29■□□□□ 0.52
C6orf48-202ENST00000375635 KIF24Q5T7B8 1368 aa18.29■□□□□ 0.52
C6orf48-202ENST00000375635 WNK3Q9BYP7 1800 aa18.28■□□□□ 0.52
C6orf48-202ENST00000375635 AMPHP49418 695 aa18.28■□□□□ 0.52
C6orf48-202ENST00000375635 POLKQ9UBT6 870 aa18.28■□□□□ 0.52
C6orf48-202ENST00000375635 DISP2A7MBM2 1401 aa18.28■□□□□ 0.52
C6orf48-202ENST00000375635 PARP4Q9UKK3 1724 aaKnown RBP18.27■□□□□ 0.52
C6orf48-202ENST00000375635 RGPD2P0DJD1 1756 aa18.27■□□□□ 0.51
C6orf48-202ENST00000375635 FAM208AQ9UK61 1670 aaKnown RBP18.26■□□□□ 0.51
C6orf48-202ENST00000375635 CSB-PGBD3P0DP91 1061 aa18.26■□□□□ 0.51
C6orf48-202ENST00000375635 HSP90AB2PQ58FF8 381 aa18.26■□□□□ 0.51
C6orf48-202ENST00000375635 UPF1Q92900 1129 aaKnown RBP eCLIP18.26■□□□□ 0.515e-22■□□□□ 9.9
C6orf48-202ENST00000375635 INSRP06213 1382 aa18.26■□□□□ 0.51
C6orf48-202ENST00000375635 FLT4P35916 1363 aa18.26■□□□□ 0.51
C6orf48-202ENST00000375635 NPC1L1Q9UHC9 1359 aa18.26■□□□□ 0.51
C6orf48-202ENST00000375635 KRT27Q7Z3Y8 459 aa18.25■□□□□ 0.51
C6orf48-202ENST00000375635 SMG6Q86US8 1419 aaKnown RBP18.24■□□□□ 0.51
C6orf48-202ENST00000375635 LRRC37A3O60309 1634 aa18.24■□□□□ 0.51
C6orf48-202ENST00000375635 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
C6orf48-202ENST00000375635 MORC1Q86VD1 984 aa18.23■□□□□ 0.51
C6orf48-202ENST00000375635 LTV1Q96GA3 475 aaPredicted RBP18.23■□□□□ 0.51
C6orf48-202ENST00000375635 NLRP2Q9NX02 1062 aa18.23■□□□□ 0.51
C6orf48-202ENST00000375635 A0A0G2JS52 829 aa18.22■□□□□ 0.51
C6orf48-202ENST00000375635 MYT1Q01538 1121 aa18.22■□□□□ 0.51
C6orf48-202ENST00000375635 CC2D1BQ5T0F9 858 aaKnown RBP18.21■□□□□ 0.51
C6orf48-202ENST00000375635 NBPF6Q5VWK0 638 aa18.21■□□□□ 0.51
C6orf48-202ENST00000375635 NBPF4Q96M43 638 aa18.21■□□□□ 0.51
C6orf48-202ENST00000375635 FAM182BQ5T319 152 aa18.2■□□□□ 0.5
C6orf48-202ENST00000375635 PPM1GO15355 546 aaPredicted RBP18.19■□□□□ 0.5
C6orf48-202ENST00000375635 CDCA7Q9BWT1 371 aaPredicted RBP18.19■□□□□ 0.5
C6orf48-202ENST00000375635 NCAPD2Q15021 1401 aa18.18■□□□□ 0.5
C6orf48-202ENST00000375635 IL2RBP14784 551 aa18.16■□□□□ 0.5
C6orf48-202ENST00000375635 DDB1Q16531 1140 aa18.16■□□□□ 0.5
C6orf48-202ENST00000375635 TNS2Q63HR2 1409 aa18.15■□□□□ 0.5
C6orf48-202ENST00000375635 MEGF6O75095 1541 aa18.15■□□□□ 0.5
C6orf48-202ENST00000375635 PDE3BQ13370 1112 aa18.15■□□□□ 0.5
C6orf48-202ENST00000375635 EIF4A2Q14240 407 aaKnown RBP18.15■□□□□ 0.5
C6orf48-202ENST00000375635 USHBP1Q8N6Y0 703 aa18.15■□□□□ 0.5
C6orf48-202ENST00000375635 MARCH10Q8NA82 808 aaPredicted RBP18.15■□□□□ 0.5
C6orf48-202ENST00000375635 EYA1Q99502 592 aa18.14■□□□□ 0.49
C6orf48-202ENST00000375635 MTHFSP49914 203 aa18.13■□□□□ 0.49
C6orf48-202ENST00000375635 SHANK3Q9BYB0 1731 aa18.12■□□□□ 0.49
C6orf48-202ENST00000375635 EXOC5O00471 708 aa18.12■□□□□ 0.49
C6orf48-202ENST00000375635 FAM196AQ6ZSG2 479 aa18.12■□□□□ 0.49
C6orf48-202ENST00000375635 BCL9O00512 1426 aa18.12■□□□□ 0.49
C6orf48-202ENST00000375635 DDX10Q13206 875 aaKnown RBP18.11■□□□□ 0.49
C6orf48-202ENST00000375635 CNGB1Q14028 1251 aaPredicted RBP18.11■□□□□ 0.49
C6orf48-202ENST00000375635 CCDC125Q86Z20 511 aa18.11■□□□□ 0.49
C6orf48-202ENST00000375635 OVOS2A0A0G2JMS6 1433 aa18.11■□□□□ 0.49
C6orf48-202ENST00000375635 TNS1Q9HBL0 1735 aaKnown RBP18.11■□□□□ 0.49
C6orf48-202ENST00000375635 SBF2Q86WG5 1849 aa18.11■□□□□ 0.49
C6orf48-202ENST00000375635 RGPD1P0DJD0 1748 aa18.1■□□□□ 0.49
C6orf48-202ENST00000375635 COL3A1P02461 1466 aaPredicted RBP18.09■□□□□ 0.49
C6orf48-202ENST00000375635 IGSF1Q8N6C5 1336 aa18.09■□□□□ 0.49
C6orf48-202ENST00000375635 IL13P35225 146 aa18.09■□□□□ 0.49
C6orf48-202ENST00000375635 TRIM37O94972 964 aa18.07■□□□□ 0.48
C6orf48-202ENST00000375635 PKD1L3Q7Z443 1732 aa18.06■□□□□ 0.48
C6orf48-202ENST00000375635 PARD3Q8TEW0 1356 aa18.06■□□□□ 0.48
C6orf48-202ENST00000375635 PPP2R1AP30153 589 aa18.06■□□□□ 0.48
C6orf48-202ENST00000375635 PTF1AQ7RTS3 328 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms