RNA–Protein interactions for RNA: ENST00000374940.3

HLA-DQA2-210, Transcript of major histocompatibility complex, class II, DQ alpha 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA2, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2-210ENST00000374940 STRN4Q9NRL3 753 aa16.79■□□□□ 0.28
HLA-DQA2-210ENST00000374940 AXIN2Q9Y2T1 843 aa16.79■□□□□ 0.28
HLA-DQA2-210ENST00000374940 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
HLA-DQA2-210ENST00000374940 MAP3K19Q56UN5 1328 aa16.77■□□□□ 0.28
HLA-DQA2-210ENST00000374940 COL5A2P05997 1499 aaPredicted RBP16.77■□□□□ 0.28
HLA-DQA2-210ENST00000374940 COL18A1P39060 1754 aa16.77■□□□□ 0.28
HLA-DQA2-210ENST00000374940 FBLN1P23142 703 aa16.77■□□□□ 0.28
HLA-DQA2-210ENST00000374940 RRS1Q15050 365 aaKnown RBP16.76■□□□□ 0.27
HLA-DQA2-210ENST00000374940 ILDR2Q71H61 639 aa16.76■□□□□ 0.27
HLA-DQA2-210ENST00000374940 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
HLA-DQA2-210ENST00000374940 IP6K1Q92551 441 aa16.76■□□□□ 0.27
HLA-DQA2-210ENST00000374940 LTN1O94822 1766 aa16.76■□□□□ 0.27
HLA-DQA2-210ENST00000374940 AMPHP49418 695 aa16.75■□□□□ 0.27
HLA-DQA2-210ENST00000374940 ANKRD26Q9UPS8 1709 aa16.75■□□□□ 0.27
HLA-DQA2-210ENST00000374940 CDK12Q9NYV4 1490 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQA2-210ENST00000374940 SPATA31A5Q5VU36 1347 aa16.75■□□□□ 0.27
HLA-DQA2-210ENST00000374940 SPATA31A7Q8IWB4 1347 aa16.75■□□□□ 0.27
HLA-DQA2-210ENST00000374940 LARP1Q6PKG0 1096 aaKnown RBP16.75■□□□□ 0.27
HLA-DQA2-210ENST00000374940 RTL1A6NKG5 1358 aa16.75■□□□□ 0.27
HLA-DQA2-210ENST00000374940 KIF24Q5T7B8 1368 aa16.75■□□□□ 0.27
HLA-DQA2-210ENST00000374940 NPC1L1Q9UHC9 1359 aa16.75■□□□□ 0.27
HLA-DQA2-210ENST00000374940 BLMP54132 1417 aaPredicted RBP16.74■□□□□ 0.27
HLA-DQA2-210ENST00000374940 HOXC9P31274 260 aa16.74■□□□□ 0.27
HLA-DQA2-210ENST00000374940 GLI3P10071 1580 aa16.74■□□□□ 0.27
HLA-DQA2-210ENST00000374940 SPATA31A1Q5TZJ5 1347 aa16.73■□□□□ 0.27
HLA-DQA2-210ENST00000374940 WDR17Q8IZU2 1322 aa16.73■□□□□ 0.27
HLA-DQA2-210ENST00000374940 CSB-PGBD3P0DP91 1061 aa16.73■□□□□ 0.27
HLA-DQA2-210ENST00000374940 TNNT2P45379 298 aaPredicted RBP16.73■□□□□ 0.27
HLA-DQA2-210ENST00000374940 CRB1P82279 1406 aa16.73■□□□□ 0.27
HLA-DQA2-210ENST00000374940 CC2D1BQ5T0F9 858 aaKnown RBP16.72■□□□□ 0.27
HLA-DQA2-210ENST00000374940 TOM1L2Q6ZVM7 507 aa16.72■□□□□ 0.27
HLA-DQA2-210ENST00000374940 ERBB3P21860 1342 aa16.72■□□□□ 0.27
HLA-DQA2-210ENST00000374940 FLT4P35916 1363 aa16.71■□□□□ 0.27
HLA-DQA2-210ENST00000374940 ONECUT3O60422 494 aaPredicted RBP16.71■□□□□ 0.27
HLA-DQA2-210ENST00000374940 ANKRD24Q8TF21 1146 aa16.71■□□□□ 0.27
HLA-DQA2-210ENST00000374940 POLKQ9UBT6 870 aa16.71■□□□□ 0.27
HLA-DQA2-210ENST00000374940 EMILIN1Q9Y6C2 1016 aa16.71■□□□□ 0.27
HLA-DQA2-210ENST00000374940 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQA2-210ENST00000374940 DDX10Q13206 875 aaKnown RBP16.7■□□□□ 0.26
HLA-DQA2-210ENST00000374940 USP35Q9P2H5 1018 aa16.7■□□□□ 0.26
HLA-DQA2-210ENST00000374940 THRAP3Q9Y2W1 955 aaKnown RBP16.7■□□□□ 0.26
HLA-DQA2-210ENST00000374940 RGS12O14924 1447 aa16.7■□□□□ 0.26
HLA-DQA2-210ENST00000374940 FAM98CQ17RN3 349 aaKnown RBP16.7■□□□□ 0.26
HLA-DQA2-210ENST00000374940 TCP11L2Q8N4U5 519 aa16.7■□□□□ 0.26
HLA-DQA2-210ENST00000374940 INSRP06213 1382 aa16.69■□□□□ 0.26
HLA-DQA2-210ENST00000374940 RGPD5Q99666 1765 aa16.69■□□□□ 0.26
HLA-DQA2-210ENST00000374940 PPM1GO15355 546 aaPredicted RBP16.69■□□□□ 0.26
HLA-DQA2-210ENST00000374940 BARGINQ6ZT62 677 aa16.69■□□□□ 0.26
HLA-DQA2-210ENST00000374940 CARD10Q9BWT7 1032 aa16.69■□□□□ 0.26
HLA-DQA2-210ENST00000374940 HSP90AB2PQ58FF8 381 aa16.68■□□□□ 0.26
HLA-DQA2-210ENST00000374940 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
HLA-DQA2-210ENST00000374940 LTV1Q96GA3 475 aaPredicted RBP16.68■□□□□ 0.26
HLA-DQA2-210ENST00000374940 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
HLA-DQA2-210ENST00000374940 NLRP2Q9NX02 1062 aa16.67■□□□□ 0.26
HLA-DQA2-210ENST00000374940 SMG6Q86US8 1419 aaKnown RBP16.67■□□□□ 0.26
HLA-DQA2-210ENST00000374940 PEAK1Q9H792 1746 aa16.67■□□□□ 0.26
HLA-DQA2-210ENST00000374940 A0A0G2JS52 829 aa16.66■□□□□ 0.26
HLA-DQA2-210ENST00000374940 MYT1Q01538 1121 aa16.66■□□□□ 0.26
HLA-DQA2-210ENST00000374940 MAP2P11137 1827 aaKnown RBP16.65■□□□□ 0.26
HLA-DQA2-210ENST00000374940 MSH5O43196 834 aa16.63■□□□□ 0.25
HLA-DQA2-210ENST00000374940 CDCA7Q9BWT1 371 aaPredicted RBP16.63■□□□□ 0.25
HLA-DQA2-210ENST00000374940 FAM208AQ9UK61 1670 aaKnown RBP16.63■□□□□ 0.25
HLA-DQA2-210ENST00000374940 THSD7AQ9UPZ6 1657 aa16.62■□□□□ 0.25
HLA-DQA2-210ENST00000374940 MTHFSP49914 203 aa16.61■□□□□ 0.25
HLA-DQA2-210ENST00000374940 NBPF6Q5VWK0 638 aa16.6■□□□□ 0.25
HLA-DQA2-210ENST00000374940 KRT27Q7Z3Y8 459 aa16.6■□□□□ 0.25
HLA-DQA2-210ENST00000374940 NBPF4Q96M43 638 aa16.6■□□□□ 0.25
HLA-DQA2-210ENST00000374940 EIF4A2Q14240 407 aaKnown RBP16.6■□□□□ 0.25
HLA-DQA2-210ENST00000374940 DISP2A7MBM2 1401 aa16.59■□□□□ 0.25
HLA-DQA2-210ENST00000374940 IL2RBP14784 551 aa16.59■□□□□ 0.25
HLA-DQA2-210ENST00000374940 PARD3Q8TEW0 1356 aa16.58■□□□□ 0.25
HLA-DQA2-210ENST00000374940 PDE3BQ13370 1112 aa16.58■□□□□ 0.24
HLA-DQA2-210ENST00000374940 DDB1Q16531 1140 aa16.58■□□□□ 0.24
HLA-DQA2-210ENST00000374940 SOCS7O14512 581 aa16.57■□□□□ 0.24
HLA-DQA2-210ENST00000374940 PPP2R1AP30153 589 aa16.57■□□□□ 0.24
HLA-DQA2-210ENST00000374940 PARP4Q9UKK3 1724 aaKnown RBP16.57■□□□□ 0.24
HLA-DQA2-210ENST00000374940 EXOC5O00471 708 aa16.56■□□□□ 0.24
HLA-DQA2-210ENST00000374940 RALBP1Q15311 655 aa16.56■□□□□ 0.24
HLA-DQA2-210ENST00000374940 USHBP1Q8N6Y0 703 aa16.56■□□□□ 0.24
HLA-DQA2-210ENST00000374940 EYA1Q99502 592 aa16.56■□□□□ 0.24
HLA-DQA2-210ENST00000374940 WNK3Q9BYP7 1800 aa16.56■□□□□ 0.24
HLA-DQA2-210ENST00000374940 BRWD3Q6RI45 1802 aa16.55■□□□□ 0.24
HLA-DQA2-210ENST00000374940 IL13P35225 146 aa16.55■□□□□ 0.24
HLA-DQA2-210ENST00000374940 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
HLA-DQA2-210ENST00000374940 RGPD2P0DJD1 1756 aa16.55■□□□□ 0.24
HLA-DQA2-210ENST00000374940 NCAPD2Q15021 1401 aa16.54■□□□□ 0.24
HLA-DQA2-210ENST00000374940 LRRC37A3O60309 1634 aa16.54■□□□□ 0.24
HLA-DQA2-210ENST00000374940 DIAPH1O60610 1272 aaKnown RBP16.54■□□□□ 0.24
HLA-DQA2-210ENST00000374940 CFAP53Q96M91 514 aa16.54■□□□□ 0.24
HLA-DQA2-210ENST00000374940 IGSF1Q8N6C5 1336 aa16.53■□□□□ 0.24
HLA-DQA2-210ENST00000374940 TNS2Q63HR2 1409 aa16.52■□□□□ 0.24
HLA-DQA2-210ENST00000374940 TATP17735 454 aaPredicted RBP16.52■□□□□ 0.24
HLA-DQA2-210ENST00000374940 FAM182BQ5T319 152 aa16.51■□□□□ 0.23
HLA-DQA2-210ENST00000374940 MEGF6O75095 1541 aa16.51■□□□□ 0.23
HLA-DQA2-210ENST00000374940 OVOS2A0A0G2JMS6 1433 aa16.51■□□□□ 0.23
HLA-DQA2-210ENST00000374940 FAM196AQ6ZSG2 479 aa16.5■□□□□ 0.23
HLA-DQA2-210ENST00000374940 COL3A1P02461 1466 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQA2-210ENST00000374940 MARCH10Q8NA82 808 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQA2-210ENST00000374940 ZCRB1Q8TBF4 217 aaKnown RBP16.5■□□□□ 0.23
HLA-DQA2-210ENST00000374940 UPF1Q92900 1129 aaKnown RBP eCLIP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms