RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 CDC45O75419 566 aa16.69■□□□□ 0.26
CLIC4-201ENST00000374379 CCDC27Q2M243 656 aa16.69■□□□□ 0.26
CLIC4-201ENST00000374379 CHMP5Q9NZZ3 219 aa16.69■□□□□ 0.26
CLIC4-201ENST00000374379 GOLGA6L3A6NEY3 463 aa16.69■□□□□ 0.26
CLIC4-201ENST00000374379 TRPM1Q7Z4N2 1603 aa16.69■□□□□ 0.26
CLIC4-201ENST00000374379 CLTCL1P53675 1640 aa16.69■□□□□ 0.26
CLIC4-201ENST00000374379 IL1RAPL2Q9NP60 686 aa16.69■□□□□ 0.26
CLIC4-201ENST00000374379 ALDH1L2Q3SY69 923 aa16.68■□□□□ 0.26
CLIC4-201ENST00000374379 PLXNC1O60486 1568 aa16.68■□□□□ 0.26
CLIC4-201ENST00000374379 MAP4K4O95819 1239 aaPredicted RBP16.67■□□□□ 0.26
CLIC4-201ENST00000374379 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
CLIC4-201ENST00000374379 PTMAP06454 111 aaKnown RBP16.67■□□□□ 0.26
CLIC4-201ENST00000374379 L1TD1Q5T7N2 865 aaKnown RBP16.67■□□□□ 0.26
CLIC4-201ENST00000374379 INTS3Q68E01 1043 aaKnown RBP16.67■□□□□ 0.26
CLIC4-201ENST00000374379 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
CLIC4-201ENST00000374379 ANXA1P04083 346 aa16.66■□□□□ 0.26
CLIC4-201ENST00000374379 PHF8Q9UPP1 1060 aa16.66■□□□□ 0.26
CLIC4-201ENST00000374379 GNAI2P04899 355 aa16.66■□□□□ 0.26
CLIC4-201ENST00000374379 REC8O95072 547 aa16.66■□□□□ 0.26
CLIC4-201ENST00000374379 PUS7Q96PZ0 661 aaKnown RBP16.66■□□□□ 0.26
CLIC4-201ENST00000374379 GNAT3A8MTJ3 354 aa16.66■□□□□ 0.26
CLIC4-201ENST00000374379 ZNF521Q96K83 1311 aa16.65■□□□□ 0.26
CLIC4-201ENST00000374379 VAMP4O75379 141 aa16.65■□□□□ 0.26
CLIC4-201ENST00000374379 KDM2BQ8NHM5 1336 aa16.65■□□□□ 0.26
CLIC4-201ENST00000374379 UNC13BO14795 1591 aa16.65■□□□□ 0.26
CLIC4-201ENST00000374379 TSHZ3Q63HK5 1081 aa16.65■□□□□ 0.26
CLIC4-201ENST00000374379 MPRIPQ6WCQ1 1025 aa16.65■□□□□ 0.26
CLIC4-201ENST00000374379 BRPF3Q9ULD4 1205 aa16.65■□□□□ 0.26
CLIC4-201ENST00000374379 DDX49Q9Y6V7 483 aaKnown RBP16.65■□□□□ 0.26
CLIC4-201ENST00000374379 CHMP4AQ9BY43 222 aa16.65■□□□□ 0.26
CLIC4-201ENST00000374379 KCNA6P17658 529 aa16.64■□□□□ 0.25
CLIC4-201ENST00000374379 LTKP29376 864 aa16.64■□□□□ 0.25
CLIC4-201ENST00000374379 GNAI3P08754 354 aa16.64■□□□□ 0.25
CLIC4-201ENST00000374379 RIC3Q7Z5B4 369 aa16.64■□□□□ 0.25
CLIC4-201ENST00000374379 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.64■□□□□ 0.25
CLIC4-201ENST00000374379 KDM5AP29375 1690 aaKnown RBP16.63■□□□□ 0.25
CLIC4-201ENST00000374379 EVA1CP58658 441 aa16.63■□□□□ 0.25
CLIC4-201ENST00000374379 PLEKHO1Q53GL0 409 aaPredicted RBP16.63■□□□□ 0.25
CLIC4-201ENST00000374379 IL27Q8NEV9 243 aa16.63■□□□□ 0.25
CLIC4-201ENST00000374379 TBC1D2Q9BYX2 928 aa16.63■□□□□ 0.25
CLIC4-201ENST00000374379 NEXNQ0ZGT2 675 aa16.63■□□□□ 0.25
CLIC4-201ENST00000374379 MYL6BP14649 208 aa16.62■□□□□ 0.25
CLIC4-201ENST00000374379 MEIS3Q99687 375 aa16.62■□□□□ 0.25
CLIC4-201ENST00000374379 NEO1Q92859 1461 aa16.62■□□□□ 0.25
CLIC4-201ENST00000374379 MLH3Q9UHC1 1453 aa16.62■□□□□ 0.25
CLIC4-201ENST00000374379 IFIT2P09913 472 aaKnown RBP16.62■□□□□ 0.25
CLIC4-201ENST00000374379 GPATCH3Q96I76 525 aa16.62■□□□□ 0.25
CLIC4-201ENST00000374379 NAP1L5Q96NT1 182 aaPredicted RBP16.62■□□□□ 0.25
CLIC4-201ENST00000374379 DIAPH3Q9NSV4 1193 aa16.62■□□□□ 0.25
CLIC4-201ENST00000374379 IL16Q14005 1332 aa16.62■□□□□ 0.25
CLIC4-201ENST00000374379 SBNO2Q9Y2G9 1366 aa16.62■□□□□ 0.25
CLIC4-201ENST00000374379 SYTL4Q96C24 671 aaPredicted RBP16.61■□□□□ 0.25
CLIC4-201ENST00000374379 GORABQ5T7V8 394 aa16.61■□□□□ 0.25
CLIC4-201ENST00000374379 TSPOAP1O95153 1857 aa16.61■□□□□ 0.25
CLIC4-201ENST00000374379 MTHFSDQ2M296 383 aaKnown RBP16.61■□□□□ 0.25
CLIC4-201ENST00000374379 MRPL50Q8N5N7 158 aaKnown RBP16.61■□□□□ 0.25
CLIC4-201ENST00000374379 E9PCH4 1651 aa16.61■□□□□ 0.25
CLIC4-201ENST00000374379 METP08581 1390 aa16.61■□□□□ 0.25
CLIC4-201ENST00000374379 IL13P35225 146 aa16.61■□□□□ 0.25
CLIC4-201ENST00000374379 C16orf71Q8IYS4 520 aaPredicted RBP16.61■□□□□ 0.25
CLIC4-201ENST00000374379 MAP3K19Q56UN5 1328 aa16.6■□□□□ 0.25
CLIC4-201ENST00000374379 BTBD11A6QL63 1104 aa16.6■□□□□ 0.25
CLIC4-201ENST00000374379 CCT4P50991 539 aaKnown RBP16.6■□□□□ 0.25
CLIC4-201ENST00000374379 NEK4P51957 841 aa16.6■□□□□ 0.25
CLIC4-201ENST00000374379 SIL1Q9H173 461 aa16.6■□□□□ 0.25
CLIC4-201ENST00000374379 TAF7LQ5H9L4 462 aa16.6■□□□□ 0.25
CLIC4-201ENST00000374379 SRGAP3O43295 1099 aa16.59■□□□□ 0.25
CLIC4-201ENST00000374379 SRCIN1Q9C0H9 1055 aa16.59■□□□□ 0.25
CLIC4-201ENST00000374379 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
CLIC4-201ENST00000374379 STRN4Q9NRL3 753 aa16.59■□□□□ 0.25
CLIC4-201ENST00000374379 TET3O43151 1660 aa16.59■□□□□ 0.25
CLIC4-201ENST00000374379 DDX11L8A8MPP1 907 aa16.59■□□□□ 0.25
CLIC4-201ENST00000374379 MYOM2P54296 1465 aa16.59■□□□□ 0.25
CLIC4-201ENST00000374379 NUTM1Q86Y26 1132 aa16.59■□□□□ 0.25
CLIC4-201ENST00000374379 ZBTB40Q9NUA8 1239 aa16.59■□□□□ 0.25
CLIC4-201ENST00000374379 EFCAB6Q5THR3 1501 aa16.59■□□□□ 0.25
CLIC4-201ENST00000374379 EYA1Q99502 592 aa16.58■□□□□ 0.25
CLIC4-201ENST00000374379 KIF1BO60333 1816 aa16.58■□□□□ 0.24
CLIC4-201ENST00000374379 GOLGA6L4A6NEF3 574 aa16.58■□□□□ 0.24
CLIC4-201ENST00000374379 G3BP1Q13283 466 aaKnown RBP eCLIP16.58■□□□□ 0.245e-6■■■■□ 22.5
CLIC4-201ENST00000374379 LRRCC1Q9C099 1032 aa16.58■□□□□ 0.24
CLIC4-201ENST00000374379 NPHP1O15259 732 aa16.58■□□□□ 0.24
CLIC4-201ENST00000374379 DDX58O95786 925 aaKnown RBP16.58■□□□□ 0.24
CLIC4-201ENST00000374379 RPAP2Q8IXW5 612 aaPredicted RBP16.58■□□□□ 0.24
CLIC4-201ENST00000374379 LRRC59Q96AG4 307 aaKnown RBP16.58■□□□□ 0.24
CLIC4-201ENST00000374379 CLASP1Q7Z460 1538 aa16.58■□□□□ 0.24
CLIC4-201ENST00000374379 TAF7Q15545 349 aaPredicted RBP16.57■□□□□ 0.24
CLIC4-201ENST00000374379 MCTP1Q6DN14 999 aa16.57■□□□□ 0.24
CLIC4-201ENST00000374379 FLIIQ13045 1269 aa16.57■□□□□ 0.24
CLIC4-201ENST00000374379 HDAC5Q9UQL6 1122 aa16.57■□□□□ 0.24
CLIC4-201ENST00000374379 SYNMO15061 1565 aa16.57■□□□□ 0.24
CLIC4-201ENST00000374379 LRRFIP2Q9Y608 721 aaKnown RBP16.56■□□□□ 0.24
CLIC4-201ENST00000374379 TRAK2O60296 914 aa16.56■□□□□ 0.24
CLIC4-201ENST00000374379 HDAC1Q13547 482 aaPredicted RBP16.56■□□□□ 0.24
CLIC4-201ENST00000374379 TBC1D32Q96NH3 1257 aa16.56■□□□□ 0.24
CLIC4-201ENST00000374379 DDX54Q8TDD1 881 aaKnown RBP16.56■□□□□ 0.24
CLIC4-201ENST00000374379 ABCC3O15438 1527 aa16.56■□□□□ 0.24
CLIC4-201ENST00000374379 TBC1D9Q6ZT07 1266 aa16.55■□□□□ 0.24
CLIC4-201ENST00000374379 CLASRPQ8N2M8 674 aaKnown RBP16.55■□□□□ 0.24
CLIC4-201ENST00000374379 PLEKHF1Q96S99 279 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms