RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 ZMYM3Q14202 1370 aa19.69■□□□□ 0.74
TMEM50A-201ENST00000374358 ALDH1L2Q3SY69 923 aa19.69■□□□□ 0.74
TMEM50A-201ENST00000374358 ANTXR1Q9H6X2 564 aa19.68■□□□□ 0.74
TMEM50A-201ENST00000374358 PRR36Q9H6K5 1346 aa19.68■□□□□ 0.74
TMEM50A-201ENST00000374358 COG3Q96JB2 828 aa19.67■□□□□ 0.74
TMEM50A-201ENST00000374358 C22orf23Q9BZE7 217 aa19.67■□□□□ 0.74
TMEM50A-201ENST00000374358 REREQ9P2R6 1566 aa19.67■□□□□ 0.74
TMEM50A-201ENST00000374358 MRPL50Q8N5N7 158 aaKnown RBP19.67■□□□□ 0.74
TMEM50A-201ENST00000374358 DLG5Q8TDM6 1919 aa19.66■□□□□ 0.74
TMEM50A-201ENST00000374358 AEBP1Q8IUX7 1158 aa19.66■□□□□ 0.74
TMEM50A-201ENST00000374358 C8orf58Q8NAV2 365 aa19.66■□□□□ 0.74
TMEM50A-201ENST00000374358 CCDC61Q9Y6R9 512 aa19.66■□□□□ 0.74
TMEM50A-201ENST00000374358 SOX12O15370 315 aa19.65■□□□□ 0.74
TMEM50A-201ENST00000374358 ESF1Q9H501 851 aaKnown RBP19.65■□□□□ 0.74
TMEM50A-201ENST00000374358 CDK12Q9NYV4 1490 aaPredicted RBP19.64■□□□□ 0.74
TMEM50A-201ENST00000374358 NUCB1Q02818 461 aa19.64■□□□□ 0.73
TMEM50A-201ENST00000374358 ZBTB7BO15156 539 aaPredicted RBP19.64■□□□□ 0.73
TMEM50A-201ENST00000374358 PPP6R1Q9UPN7 881 aa19.64■□□□□ 0.73
TMEM50A-201ENST00000374358 KRT24Q2M2I5 525 aa19.63■□□□□ 0.73
TMEM50A-201ENST00000374358 TWISTNBQ3B726 338 aaPredicted RBP19.63■□□□□ 0.73
TMEM50A-201ENST00000374358 GNAI1P63096 354 aa19.62■□□□□ 0.73
TMEM50A-201ENST00000374358 CHD1LQ86WJ1 897 aa19.62■□□□□ 0.73
TMEM50A-201ENST00000374358 IFT57Q9NWB7 429 aa19.62■□□□□ 0.73
TMEM50A-201ENST00000374358 ROBO2Q9HCK4 1378 aa19.62■□□□□ 0.73
TMEM50A-201ENST00000374358 ZNF853P0CG23 659 aa19.62■□□□□ 0.73
TMEM50A-201ENST00000374358 ANKRD45Q5TZF3 282 aa19.61■□□□□ 0.73
TMEM50A-201ENST00000374358 SIRT2Q8IXJ6 389 aa19.61■□□□□ 0.73
TMEM50A-201ENST00000374358 MON2Q7Z3U7 1717 aa19.61■□□□□ 0.73
TMEM50A-201ENST00000374358 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.59■□□□□ 0.73
TMEM50A-201ENST00000374358 AATKQ6ZMQ8 1374 aa19.59■□□□□ 0.73
TMEM50A-201ENST00000374358 PTCH1Q13635 1447 aa19.59■□□□□ 0.73
TMEM50A-201ENST00000374358 SULT6B1Q6IMI4 303 aa19.59■□□□□ 0.73
TMEM50A-201ENST00000374358 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
TMEM50A-201ENST00000374358 CFAP44Q96MT7 982 aa19.59■□□□□ 0.73
TMEM50A-201ENST00000374358 C3P01024 1663 aa19.58■□□□□ 0.73
TMEM50A-201ENST00000374358 BRPF1P55201 1214 aaPredicted RBP19.58■□□□□ 0.72
TMEM50A-201ENST00000374358 EIF4A2Q14240 407 aaKnown RBP19.58■□□□□ 0.72
TMEM50A-201ENST00000374358 CALD1Q05682 793 aaKnown RBP19.57■□□□□ 0.72
TMEM50A-201ENST00000374358 MCM10Q7L590 875 aa19.57■□□□□ 0.72
TMEM50A-201ENST00000374358 ITSN1Q15811 1721 aa19.57■□□□□ 0.72
TMEM50A-201ENST00000374358 ABCC4O15439 1325 aa19.57■□□□□ 0.72
TMEM50A-201ENST00000374358 ZNF428Q96B54 188 aa19.56■□□□□ 0.72
TMEM50A-201ENST00000374358 AKAP12Q02952 1782 aa19.56■□□□□ 0.72
TMEM50A-201ENST00000374358 TNRQ92752 1358 aa19.56■□□□□ 0.72
TMEM50A-201ENST00000374358 HSP90AB2PQ58FF8 381 aa19.56■□□□□ 0.72
TMEM50A-201ENST00000374358 ACEP12821 1306 aa19.55■□□□□ 0.72
TMEM50A-201ENST00000374358 ARXQ96QS3 562 aa19.55■□□□□ 0.72
TMEM50A-201ENST00000374358 SLC26A8Q96RN1 970 aa19.55■□□□□ 0.72
TMEM50A-201ENST00000374358 PIK3R4Q99570 1358 aa19.55■□□□□ 0.72
TMEM50A-201ENST00000374358 TECPR2O15040 1411 aa19.54■□□□□ 0.72
TMEM50A-201ENST00000374358 LTKP29376 864 aa19.54■□□□□ 0.72
TMEM50A-201ENST00000374358 CEBPAP49715 358 aaPredicted RBP19.54■□□□□ 0.72
TMEM50A-201ENST00000374358 ARHGAP45Q92619 1136 aa19.54■□□□□ 0.72
TMEM50A-201ENST00000374358 TMEM2Q9UHN6 1383 aa19.54■□□□□ 0.72
TMEM50A-201ENST00000374358 KNDC1Q76NI1 1749 aa19.53■□□□□ 0.72
TMEM50A-201ENST00000374358 TTC21BQ7Z4L5 1316 aa19.53■□□□□ 0.72
TMEM50A-201ENST00000374358 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.53■□□□□ 0.72
TMEM50A-201ENST00000374358 ADAMTS13Q76LX8 1427 aa19.52■□□□□ 0.72
TMEM50A-201ENST00000374358 LMOD3Q0VAK6 560 aa19.52■□□□□ 0.72
TMEM50A-201ENST00000374358 MIS18AQ9NYP9 233 aa19.52■□□□□ 0.72
TMEM50A-201ENST00000374358 UBR1Q8IWV7 1749 aa19.51■□□□□ 0.71
TMEM50A-201ENST00000374358 BMP2KLQ5H9B9 411 aa19.5■□□□□ 0.71
TMEM50A-201ENST00000374358 GCC1Q96CN9 775 aa19.5■□□□□ 0.71
TMEM50A-201ENST00000374358 ZNF692Q9BU19 519 aaPredicted RBP19.5■□□□□ 0.71
TMEM50A-201ENST00000374358 KIF13AQ9H1H9 1805 aa19.5■□□□□ 0.71
TMEM50A-201ENST00000374358 FOXO3O43524 673 aa19.5■□□□□ 0.71
TMEM50A-201ENST00000374358 HSCBQ8IWL3 235 aa19.49■□□□□ 0.71
TMEM50A-201ENST00000374358 PEAK1Q9H792 1746 aa19.49■□□□□ 0.71
TMEM50A-201ENST00000374358 TBC1D9Q6ZT07 1266 aa19.49■□□□□ 0.71
TMEM50A-201ENST00000374358 GZF1Q9H116 711 aaPredicted RBP19.49■□□□□ 0.71
TMEM50A-201ENST00000374358 CD2BP2O95400 341 aaKnown RBP19.48■□□□□ 0.71
TMEM50A-201ENST00000374358 HDGFP51858 240 aaKnown RBP19.48■□□□□ 0.71
TMEM50A-201ENST00000374358 APBB1O00213 710 aa19.48■□□□□ 0.71
TMEM50A-201ENST00000374358 RBM25P49756 843 aaKnown RBP19.48■□□□□ 0.71
TMEM50A-201ENST00000374358 RBM42Q9BTD8 480 aaKnown RBP19.48■□□□□ 0.71
TMEM50A-201ENST00000374358 API5Q9BZZ5 524 aaKnown RBP19.48■□□□□ 0.71
TMEM50A-201ENST00000374358 NRKQ7Z2Y5 1582 aa19.47■□□□□ 0.71
TMEM50A-201ENST00000374358 OVOS2A0A0J9YW53 1432 aa19.47■□□□□ 0.71
TMEM50A-201ENST00000374358 OVOS2Q6IE36 1432 aa19.47■□□□□ 0.71
TMEM50A-201ENST00000374358 C16orf71Q8IYS4 520 aaPredicted RBP19.47■□□□□ 0.71
TMEM50A-201ENST00000374358 KIF2CQ99661 725 aa19.47■□□□□ 0.71
TMEM50A-201ENST00000374358 FOXD4L1Q9NU39 408 aa19.47■□□□□ 0.71
TMEM50A-201ENST00000374358 RIMS1Q86UR5 1692 aaKnown RBP19.47■□□□□ 0.71
TMEM50A-201ENST00000374358 SIRT1Q96EB6 747 aa19.47■□□□□ 0.71
TMEM50A-201ENST00000374358 GSPT1P15170 499 aaKnown RBP19.46■□□□□ 0.71
TMEM50A-201ENST00000374358 MCM4P33991 863 aa19.46■□□□□ 0.71
TMEM50A-201ENST00000374358 USP6P35125 1406 aa19.46■□□□□ 0.71
TMEM50A-201ENST00000374358 PTPRUQ92729 1446 aa19.46■□□□□ 0.71
TMEM50A-201ENST00000374358 OTUD7AQ8TE49 926 aaPredicted RBP19.46■□□□□ 0.71
TMEM50A-201ENST00000374358 RGS12O14924 1447 aa19.46■□□□□ 0.71
TMEM50A-201ENST00000374358 CHMP5Q9NZZ3 219 aa19.45■□□□□ 0.7
TMEM50A-201ENST00000374358 MSH6P52701 1360 aa19.44■□□□□ 0.7
TMEM50A-201ENST00000374358 MAP3K19Q56UN5 1328 aa19.44■□□□□ 0.7
TMEM50A-201ENST00000374358 CHL1O00533 1208 aa19.44■□□□□ 0.7
TMEM50A-201ENST00000374358 CHMP4BQ9H444 224 aaKnown RBP19.43■□□□□ 0.7
TMEM50A-201ENST00000374358 TOPAZ1Q8N9V7 1692 aa19.43■□□□□ 0.7
TMEM50A-201ENST00000374358 SMARCA5O60264 1052 aaPredicted RBP19.42■□□□□ 0.7
TMEM50A-201ENST00000374358 MEIS3Q99687 375 aa19.42■□□□□ 0.7
TMEM50A-201ENST00000374358 PLEKHM2Q8IWE5 1019 aa19.42■□□□□ 0.7
TMEM50A-201ENST00000374358 ATP10DQ9P241 1426 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms