RNA–Protein interactions for RNA: ENST00000373956.7

PCDH15-204, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,931 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-204ENST00000373956 CNNM1Q9NRU3 951 aa8.02□□□□□ -1.12
PCDH15-204ENST00000373956 NUP160Q12769 1436 aa8.02□□□□□ -1.13
PCDH15-204ENST00000373956 ANAPC15P60006 121 aa8.02□□□□□ -1.13
PCDH15-204ENST00000373956 RBM42Q9BTD8 480 aaKnown RBP8.02□□□□□ -1.13
PCDH15-204ENST00000373956 CFAP45Q9UL16 551 aa8.02□□□□□ -1.13
PCDH15-204ENST00000373956 PRPF40AO75400 957 aaKnown RBP8.02□□□□□ -1.13
PCDH15-204ENST00000373956 TRIM21P19474 475 aaKnown RBP8.02□□□□□ -1.13
PCDH15-204ENST00000373956 CHMP4BP1P59074 171 aa8.02□□□□□ -1.13
PCDH15-204ENST00000373956 CCDC102AQ96A19 550 aa8.02□□□□□ -1.13
PCDH15-204ENST00000373956 ZNF428Q96B54 188 aa8.02□□□□□ -1.13
PCDH15-204ENST00000373956 CCDC113Q9H0I3 377 aa8.02□□□□□ -1.13
PCDH15-204ENST00000373956 BCCIPQ9P287 314 aaKnown RBP eCLIP8.02□□□□□ -1.13
PCDH15-204ENST00000373956 DNAJC5BQ9UF47 199 aa8.02□□□□□ -1.13
PCDH15-204ENST00000373956 NUP133Q8WUM0 1156 aa8.02□□□□□ -1.13
PCDH15-204ENST00000373956 ERLIN1O75477 346 aa8.01□□□□□ -1.13
PCDH15-204ENST00000373956 ZNF76P36508 570 aa8.01□□□□□ -1.13
PCDH15-204ENST00000373956 PSMD1Q99460 953 aa8.01□□□□□ -1.13
PCDH15-204ENST00000373956 GOPCQ9HD26 462 aa8.01□□□□□ -1.13
PCDH15-204ENST00000373956 SOGA3Q5TF21 947 aa8.01□□□□□ -1.13
PCDH15-204ENST00000373956 KIAA1328Q86T90 577 aa8.01□□□□□ -1.13
PCDH15-204ENST00000373956 ERC1Q8IUD2 1116 aa8.01□□□□□ -1.13
PCDH15-204ENST00000373956 LRRFIP2Q9Y608 721 aaKnown RBP8.01□□□□□ -1.13
PCDH15-204ENST00000373956 IFT140Q96RY7 1462 aa8.01□□□□□ -1.13
PCDH15-204ENST00000373956 DDX23Q9BUQ8 820 aaKnown RBP8.01□□□□□ -1.13
PCDH15-204ENST00000373956 CBFA2T2O43439 604 aa8.01□□□□□ -1.13
PCDH15-204ENST00000373956 RAPGEF4Q8WZA2 1011 aa8.01□□□□□ -1.13
PCDH15-204ENST00000373956 EIF4G3O43432 1585 aaKnown RBP8.01□□□□□ -1.13
PCDH15-204ENST00000373956 FMN1Q68DA7 1419 aa8.01□□□□□ -1.13
PCDH15-204ENST00000373956 SSBP05455 408 aaKnown RBP eCLIP8.01□□□□□ -1.13
PCDH15-204ENST00000373956 MRE11P49959 708 aa8.01□□□□□ -1.13
PCDH15-204ENST00000373956 NFKBIBQ15653 356 aa8□□□□□ -1.13
PCDH15-204ENST00000373956 PIBF1Q8WXW3 757 aa8□□□□□ -1.13
PCDH15-204ENST00000373956 TAF4BQ92750 862 aa8□□□□□ -1.13
PCDH15-204ENST00000373956 RAPGEF2Q9Y4G8 1499 aa8□□□□□ -1.13
PCDH15-204ENST00000373956 CLASP1Q7Z460 1538 aa8□□□□□ -1.13
PCDH15-204ENST00000373956 APAF1O14727 1248 aa8□□□□□ -1.13
PCDH15-204ENST00000373956 CCDC158Q5M9N0 1113 aa8□□□□□ -1.13
PCDH15-204ENST00000373956 TNMDQ9H2S6 317 aa8□□□□□ -1.13
PCDH15-204ENST00000373956 FIBPO43427 364 aa8□□□□□ -1.13
PCDH15-204ENST00000373956 CCDC57Q2TAC2 916 aa8□□□□□ -1.13
PCDH15-204ENST00000373956 CCDC144AA2RUR9 1427 aa8□□□□□ -1.13
PCDH15-204ENST00000373956 SCLT1Q96NL6 688 aa8□□□□□ -1.13
PCDH15-204ENST00000373956 GNL3LQ9NVN8 582 aaKnown RBP8□□□□□ -1.13
PCDH15-204ENST00000373956 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.99□□□□□ -1.13
PCDH15-204ENST00000373956 PDS5BQ9NTI5 1447 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 UQCRHLA0A096LP55 91 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 UQCRHP07919 91 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 GRIPAP1Q4V328 841 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 ATF3P18847 181 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 UBE4AQ14139 1066 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 PPM1EQ8WY54 764 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 PKNOX2Q96KN3 472 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 CCDC178Q5BJE1 867 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 CCDC148Q8NFR7 591 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 HIP1O00291 1037 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 MPNDQ8N594 471 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 L3MBTL2Q969R5 705 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 SPINK5Q9NQ38 1064 aaPredicted RBP7.99□□□□□ -1.13
PCDH15-204ENST00000373956 HOMER2Q9NSB8 354 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 POTEJP0CG39 1038 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 TTC16Q8NEE8 873 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 NLRP2Q9NX02 1062 aa7.99□□□□□ -1.13
PCDH15-204ENST00000373956 NOL7Q9UMY1 257 aaKnown RBP7.99□□□□□ -1.13
PCDH15-204ENST00000373956 SF3B2Q13435 895 aaKnown RBP7.98□□□□□ -1.13
PCDH15-204ENST00000373956 RUNDC1Q96C34 613 aa7.98□□□□□ -1.13
PCDH15-204ENST00000373956 COMMD10Q9Y6G5 202 aa7.98□□□□□ -1.13
PCDH15-204ENST00000373956 TRAK2O60296 914 aa7.98□□□□□ -1.13
PCDH15-204ENST00000373956 USP8P40818 1118 aa7.98□□□□□ -1.13
PCDH15-204ENST00000373956 CEP57L1Q8IYX8 460 aa7.98□□□□□ -1.13
PCDH15-204ENST00000373956 DNAI2Q9GZS0 605 aa7.98□□□□□ -1.13
PCDH15-204ENST00000373956 GNAI1P63096 354 aa7.98□□□□□ -1.13
PCDH15-204ENST00000373956 USP5P45974 858 aa7.98□□□□□ -1.13
PCDH15-204ENST00000373956 ME1P48163 572 aa7.98□□□□□ -1.13
PCDH15-204ENST00000373956 PLCD3Q8N3E9 789 aa7.98□□□□□ -1.13
PCDH15-204ENST00000373956 PANK1Q8TE04 598 aa7.98□□□□□ -1.13
PCDH15-204ENST00000373956 EPB41L2O43491 1005 aaKnown RBP7.97□□□□□ -1.13
PCDH15-204ENST00000373956 ZSCAN29Q8IWY8 852 aaPredicted RBP7.97□□□□□ -1.13
PCDH15-204ENST00000373956 WDR70Q9NW82 654 aa7.97□□□□□ -1.13
PCDH15-204ENST00000373956 C1orf115Q9H7X2 142 aa7.97□□□□□ -1.13
PCDH15-204ENST00000373956 SHTN1A0MZ66 631 aa7.97□□□□□ -1.13
PCDH15-204ENST00000373956 CASQ1P31415 396 aa7.97□□□□□ -1.13
PCDH15-204ENST00000373956 KANK4Q5T7N3 995 aaPredicted RBP7.97□□□□□ -1.13
PCDH15-204ENST00000373956 CTNNBL1Q8WYA6 563 aaPredicted RBP7.97□□□□□ -1.13
PCDH15-204ENST00000373956 TMX1Q9H3N1 280 aa7.97□□□□□ -1.13
PCDH15-204ENST00000373956 ST20-MTHFSA0A0A6YYL1 179 aa7.97□□□□□ -1.13
PCDH15-204ENST00000373956 CCDC192P0DO97 292 aa7.97□□□□□ -1.13
PCDH15-204ENST00000373956 TRIM22Q8IYM9 498 aa7.97□□□□□ -1.13
PCDH15-204ENST00000373956 SIL1Q9H173 461 aa7.97□□□□□ -1.13
PCDH15-204ENST00000373956 SMG6Q86US8 1419 aaKnown RBP7.97□□□□□ -1.13
PCDH15-204ENST00000373956 ZNF397Q8NF99 534 aaPredicted RBP7.96□□□□□ -1.13
PCDH15-204ENST00000373956 MYCNP04198 464 aaPredicted RBP7.96□□□□□ -1.13
PCDH15-204ENST00000373956 SERPINA10Q9UK55 444 aa7.96□□□□□ -1.13
PCDH15-204ENST00000373956 EIF5P55010 431 aaKnown RBP7.96□□□□□ -1.13
PCDH15-204ENST00000373956 AEBP1Q8IUX7 1158 aa7.96□□□□□ -1.13
PCDH15-204ENST00000373956 JMYQ8N9B5 988 aa7.96□□□□□ -1.13
PCDH15-204ENST00000373956 ADCY10Q96PN6 1610 aa7.96□□□□□ -1.14
PCDH15-204ENST00000373956 TMEM87AQ8NBN3 555 aa7.96□□□□□ -1.14
PCDH15-204ENST00000373956 TMCO5BA8MYB1 307 aa7.96□□□□□ -1.14
PCDH15-204ENST00000373956 CCDC30Q5VVM6 783 aa7.96□□□□□ -1.14
PCDH15-204ENST00000373956 ANKRD18BA2A2Z9 1011 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms