RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 BMP2KQ9NSY1 1161 aaPredicted RBP10.67□□□□□ -0.7
PTPRT-206ENST00000373198 CCDC158Q5M9N0 1113 aa10.67□□□□□ -0.7
PTPRT-206ENST00000373198 C22orf23Q9BZE7 217 aa10.67□□□□□ -0.7
PTPRT-206ENST00000373198 BICDL1Q6ZP65 573 aa10.67□□□□□ -0.7
PTPRT-206ENST00000373198 IL27Q8NEV9 243 aa10.66□□□□□ -0.7
PTPRT-206ENST00000373198 CARMIL1Q5VZK9 1371 aa10.66□□□□□ -0.7
PTPRT-206ENST00000373198 GSTTP1A0A1W2PQM5 241 aa10.66□□□□□ -0.7
PTPRT-206ENST00000373198 UBA5Q9GZZ9 404 aa10.66□□□□□ -0.7
PTPRT-206ENST00000373198 SURF6O75683 361 aaKnown RBP10.66□□□□□ -0.7
PTPRT-206ENST00000373198 PPP4R3AQ6IN85 833 aa10.66□□□□□ -0.7
PTPRT-206ENST00000373198 MYBBP1AQ9BQG0 1328 aaKnown RBP10.66□□□□□ -0.7
PTPRT-206ENST00000373198 APAF1O14727 1248 aa10.66□□□□□ -0.7
PTPRT-206ENST00000373198 LIG1P18858 919 aa10.66□□□□□ -0.7
PTPRT-206ENST00000373198 SMC1AQ14683 1233 aaKnown RBP10.66□□□□□ -0.7
PTPRT-206ENST00000373198 TXLNBQ8N3L3 684 aa10.66□□□□□ -0.7
PTPRT-206ENST00000373198 PABPN1LA6NDY0 278 aaKnown RBP10.66□□□□□ -0.7
PTPRT-206ENST00000373198 UACAQ9BZF9 1416 aa10.66□□□□□ -0.7
PTPRT-206ENST00000373198 RRP1P56182 461 aaKnown RBP10.66□□□□□ -0.7
PTPRT-206ENST00000373198 SETD1BQ9UPS6 1966 aaKnown RBP10.66□□□□□ -0.7
PTPRT-206ENST00000373198 GPATCH11Q8N954 259 aa10.66□□□□□ -0.7
PTPRT-206ENST00000373198 TDO2P48775 406 aa10.65□□□□□ -0.7
PTPRT-206ENST00000373198 KIF7Q2M1P5 1343 aa10.65□□□□□ -0.7
PTPRT-206ENST00000373198 WDHD1O75717 1129 aaPredicted RBP10.65□□□□□ -0.7
PTPRT-206ENST00000373198 UQCRHLA0A096LP55 91 aa10.65□□□□□ -0.7
PTPRT-206ENST00000373198 UQCRHP07919 91 aa10.65□□□□□ -0.7
PTPRT-206ENST00000373198 CBX1P83916 185 aa10.65□□□□□ -0.7
PTPRT-206ENST00000373198 GRM1Q13255 1194 aa10.65□□□□□ -0.7
PTPRT-206ENST00000373198 ABTB2Q8N961 1025 aa10.65□□□□□ -0.7
PTPRT-206ENST00000373198 EIF3JO75822 258 aaKnown RBP10.65□□□□□ -0.7
PTPRT-206ENST00000373198 FKBP4Q02790 459 aaKnown RBP eCLIP10.65□□□□□ -0.7
PTPRT-206ENST00000373198 TNIP1Q15025 636 aa10.65□□□□□ -0.7
PTPRT-206ENST00000373198 CCDC144AA2RUR9 1427 aa10.65□□□□□ -0.7
PTPRT-206ENST00000373198 MYL6BP14649 208 aa10.65□□□□□ -0.71
PTPRT-206ENST00000373198 IQCEQ6IPM2 695 aa10.65□□□□□ -0.71
PTPRT-206ENST00000373198 TAF4BQ92750 862 aa10.65□□□□□ -0.71
PTPRT-206ENST00000373198 EIF5P55010 431 aaKnown RBP10.64□□□□□ -0.71
PTPRT-206ENST00000373198 PPM1EQ8WY54 764 aa10.64□□□□□ -0.71
PTPRT-206ENST00000373198 TRERF1Q96PN7 1200 aa10.64□□□□□ -0.71
PTPRT-206ENST00000373198 ST20-MTHFSA0A0A6YYL1 179 aa10.64□□□□□ -0.71
PTPRT-206ENST00000373198 HOOK3Q86VS8 718 aa10.64□□□□□ -0.71
PTPRT-206ENST00000373198 NACAP1Q9BZK3 213 aa10.64□□□□□ -0.71
PTPRT-206ENST00000373198 DNA2P51530 1060 aa10.64□□□□□ -0.71
PTPRT-206ENST00000373198 CCDC102AQ96A19 550 aa10.64□□□□□ -0.71
PTPRT-206ENST00000373198 TNMDQ9H2S6 317 aa10.64□□□□□ -0.71
PTPRT-206ENST00000373198 CCDC150Q8NCX0 1101 aa10.64□□□□□ -0.71
PTPRT-206ENST00000373198 TMOD2Q9NZR1 351 aa10.64□□□□□ -0.71
PTPRT-206ENST00000373198 JMYQ8N9B5 988 aa10.64□□□□□ -0.71
PTPRT-206ENST00000373198 ARL1P40616 181 aaPredicted RBP10.64□□□□□ -0.71
PTPRT-206ENST00000373198 IPO4Q8TEX9 1081 aaKnown RBP10.63□□□□□ -0.71
PTPRT-206ENST00000373198 ZFP91Q96JP5 570 aaPredicted RBP10.63□□□□□ -0.71
PTPRT-206ENST00000373198 TMCO5BA8MYB1 307 aa10.63□□□□□ -0.71
PTPRT-206ENST00000373198 ZWINTO95229 277 aa10.63□□□□□ -0.71
PTPRT-206ENST00000373198 TRMT1LQ7Z2T5 733 aaKnown RBP10.63□□□□□ -0.71
PTPRT-206ENST00000373198 CDC45O75419 566 aa10.63□□□□□ -0.71
PTPRT-206ENST00000373198 NOL7Q9UMY1 257 aaKnown RBP10.63□□□□□ -0.71
PTPRT-206ENST00000373198 RAB3GAP2Q9H2M9 1393 aa10.63□□□□□ -0.71
PTPRT-206ENST00000373198 FERMT2Q96AC1 680 aa10.63□□□□□ -0.71
PTPRT-206ENST00000373198 DACH1Q9UI36 760 aa10.63□□□□□ -0.71
PTPRT-206ENST00000373198 C1orf115Q9H7X2 142 aa10.63□□□□□ -0.71
PTPRT-206ENST00000373198 UBAC1Q9BSL1 405 aa10.63□□□□□ -0.71
PTPRT-206ENST00000373198 DDX54Q8TDD1 881 aaKnown RBP10.62□□□□□ -0.71
PTPRT-206ENST00000373198 VGFO15240 615 aaPredicted RBP10.62□□□□□ -0.71
PTPRT-206ENST00000373198 CYB5RLQ6IPT4 315 aa10.62□□□□□ -0.71
PTPRT-206ENST00000373198 CCDC85AQ96PX6 553 aaPredicted RBP10.62□□□□□ -0.71
PTPRT-206ENST00000373198 SEC63Q9UGP8 760 aaKnown RBP10.62□□□□□ -0.71
PTPRT-206ENST00000373198 DHX8Q14562 1220 aaKnown RBP10.62□□□□□ -0.71
PTPRT-206ENST00000373198 SSX2IPQ9Y2D8 614 aa10.62□□□□□ -0.71
PTPRT-206ENST00000373198 RAI14Q9P0K7 980 aa10.62□□□□□ -0.71
PTPRT-206ENST00000373198 LETM1O95202 739 aaPredicted RBP10.62□□□□□ -0.71
PTPRT-206ENST00000373198 PDCP20941 246 aa10.62□□□□□ -0.71
PTPRT-206ENST00000373198 CETN2P41208 172 aa10.62□□□□□ -0.71
PTPRT-206ENST00000373198 ZNF354CQ86Y25 554 aa10.62□□□□□ -0.71
PTPRT-206ENST00000373198 PRPF40AO75400 957 aaKnown RBP10.62□□□□□ -0.71
PTPRT-206ENST00000373198 CCDC178Q5BJE1 867 aa10.62□□□□□ -0.71
PTPRT-206ENST00000373198 ESCO1Q5FWF5 840 aa10.62□□□□□ -0.71
PTPRT-206ENST00000373198 PANK1Q8TE04 598 aa10.61□□□□□ -0.71
PTPRT-206ENST00000373198 MRE11P49959 708 aa10.61□□□□□ -0.71
PTPRT-206ENST00000373198 NEK4P51957 841 aa10.61□□□□□ -0.71
PTPRT-206ENST00000373198 CFAP65Q6ZU64 1925 aaKnown RBP10.61□□□□□ -0.71
PTPRT-206ENST00000373198 CTNNA2P26232 953 aa10.61□□□□□ -0.71
PTPRT-206ENST00000373198 PPP1R12BO60237 982 aaPredicted RBP10.61□□□□□ -0.71
PTPRT-206ENST00000373198 NLRP6P59044 892 aa10.61□□□□□ -0.71
PTPRT-206ENST00000373198 HIP1O00291 1037 aa10.61□□□□□ -0.71
PTPRT-206ENST00000373198 CCDC57Q2TAC2 916 aa10.61□□□□□ -0.71
PTPRT-206ENST00000373198 CRACR2BQ8N4Y2 399 aaPredicted RBP10.61□□□□□ -0.71
PTPRT-206ENST00000373198 IFFO1Q0D2I5 559 aa10.61□□□□□ -0.71
PTPRT-206ENST00000373198 ZMYND15Q9H091 742 aa10.61□□□□□ -0.71
PTPRT-206ENST00000373198 TNIKQ9UKE5 1360 aa10.61□□□□□ -0.71
PTPRT-206ENST00000373198 SMG6Q86US8 1419 aaKnown RBP10.61□□□□□ -0.71
PTPRT-206ENST00000373198 CEP57L1Q8IYX8 460 aa10.6□□□□□ -0.71
PTPRT-206ENST00000373198 CABP4P57796 275 aa10.6□□□□□ -0.71
PTPRT-206ENST00000373198 SPATA24Q86W54 205 aa10.6□□□□□ -0.71
PTPRT-206ENST00000373198 L3MBTL2Q969R5 705 aa10.6□□□□□ -0.71
PTPRT-206ENST00000373198 PRKCSHP14314 528 aaPredicted RBP10.6□□□□□ -0.71
PTPRT-206ENST00000373198 FERP16591 822 aa10.6□□□□□ -0.71
PTPRT-206ENST00000373198 GNAI1P63096 354 aa10.6□□□□□ -0.71
PTPRT-206ENST00000373198 TOM1L2Q6ZVM7 507 aa10.6□□□□□ -0.71
PTPRT-206ENST00000373198 USP8P40818 1118 aa10.6□□□□□ -0.71
PTPRT-206ENST00000373198 APBB1IPQ7Z5R6 666 aaPredicted RBP10.6□□□□□ -0.71
PTPRT-206ENST00000373198 ERLIN1O75477 346 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 270.4 ms