RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 PROSER2Q86WR7 435 aaPredicted RBP32.35■■■□□ 2.77
CTSA-203ENST00000372459 PAK3O75914 559 aaPredicted RBP32.34■■■□□ 2.77
CTSA-203ENST00000372459 ABTB2Q8N961 1025 aa32.34■■■□□ 2.77
CTSA-203ENST00000372459 TSR2Q969E8 191 aaKnown RBP32.34■■■□□ 2.77
CTSA-203ENST00000372459 ANP32EQ9BTT0 268 aa32.32■■■□□ 2.77
CTSA-203ENST00000372459 MARF1Q9Y4F3 1742 aaKnown RBP32.32■■■□□ 2.76
CTSA-203ENST00000372459 CANXP27824 592 aaKnown RBP32.31■■■□□ 2.76
CTSA-203ENST00000372459 CALD1Q05682 793 aaKnown RBP32.31■■■□□ 2.76
CTSA-203ENST00000372459 PDE3AQ14432 1141 aa32.31■■■□□ 2.76
CTSA-203ENST00000372459 RGPD1P0DJD0 1748 aa32.31■■■□□ 2.76
CTSA-203ENST00000372459 AMPHP49418 695 aa32.3■■■□□ 2.76
CTSA-203ENST00000372459 LMOD3Q0VAK6 560 aa32.3■■■□□ 2.76
CTSA-203ENST00000372459 SULT6B1Q6IMI4 303 aa32.3■■■□□ 2.76
CTSA-203ENST00000372459 KIF24Q5T7B8 1368 aa32.3■■■□□ 2.76
CTSA-203ENST00000372459 PSME1Q06323 249 aa32.28■■■□□ 2.76
CTSA-203ENST00000372459 NUTM2GQ5VZR2 741 aa32.28■■■□□ 2.76
CTSA-203ENST00000372459 EXOSC9Q06265 439 aaKnown RBP32.28■■■□□ 2.76
CTSA-203ENST00000372459 ARHGEF10O15013 1369 aa32.27■■■□□ 2.76
CTSA-203ENST00000372459 AEBP1Q8IUX7 1158 aa32.26■■■□□ 2.75
CTSA-203ENST00000372459 DLG5Q8TDM6 1919 aa32.25■■■□□ 2.75
CTSA-203ENST00000372459 C19orf44Q9H6X5 657 aa32.25■■■□□ 2.75
CTSA-203ENST00000372459 FRAT1Q92837 279 aaPredicted RBP32.24■■■□□ 2.75
CTSA-203ENST00000372459 ORAI2Q96SN7 254 aa32.21■■■□□ 2.75
CTSA-203ENST00000372459 BCL2L13Q9BXK5 485 aa32.2■■■□□ 2.75
CTSA-203ENST00000372459 IFT57Q9NWB7 429 aa32.2■■■□□ 2.75
CTSA-203ENST00000372459 HOXC9P31274 260 aa32.19■■■□□ 2.74
CTSA-203ENST00000372459 GNAI1P63096 354 aa32.19■■■□□ 2.74
CTSA-203ENST00000372459 LAS1LQ9Y4W2 734 aaKnown RBP32.18■■■□□ 2.74
CTSA-203ENST00000372459 NCOA3Q9Y6Q9 1424 aa32.18■■■□□ 2.74
CTSA-203ENST00000372459 HSPA2P54652 639 aa32.18■■■□□ 2.74
CTSA-203ENST00000372459 THUMPD2Q9BTF0 503 aaKnown RBP32.18■■■□□ 2.74
CTSA-203ENST00000372459 C1orf167Q5SNV9 1468 aa32.17■■■□□ 2.74
CTSA-203ENST00000372459 RTL1A6NKG5 1358 aa32.17■■■□□ 2.74
CTSA-203ENST00000372459 KIF1AQ12756 1690 aa32.17■■■□□ 2.74
CTSA-203ENST00000372459 IGSF1Q8N6C5 1336 aa32.16■■■□□ 2.74
CTSA-203ENST00000372459 KDRP35968 1356 aa32.16■■■□□ 2.74
CTSA-203ENST00000372459 FOXO3O43524 673 aa32.16■■■□□ 2.74
CTSA-203ENST00000372459 STRCP1A6NGW2 1772 aa32.15■■■□□ 2.74
CTSA-203ENST00000372459 TMEM94Q12767 1356 aa32.15■■■□□ 2.74
CTSA-203ENST00000372459 PANK1Q8TE04 598 aa32.15■■■□□ 2.74
CTSA-203ENST00000372459 SMC4Q9NTJ3 1288 aa32.15■■■□□ 2.74
CTSA-203ENST00000372459 ZNF853P0CG23 659 aa32.14■■■□□ 2.74
CTSA-203ENST00000372459 EYA1Q99502 592 aa32.14■■■□□ 2.74
CTSA-203ENST00000372459 KCNH5Q8NCM2 988 aa32.14■■■□□ 2.74
CTSA-203ENST00000372459 DCCP43146 1447 aa32.13■■■□□ 2.73
CTSA-203ENST00000372459 NFAT5O94916 1531 aa32.13■■■□□ 2.73
CTSA-203ENST00000372459 KDM4FA0A1W2PPD8 638 aa32.12■■■□□ 2.73
CTSA-203ENST00000372459 ZNF428Q96B54 188 aa32.12■■■□□ 2.73
CTSA-203ENST00000372459 CFAP44Q96MT7 982 aa32.12■■■□□ 2.73
CTSA-203ENST00000372459 COG6Q9Y2V7 657 aa32.12■■■□□ 2.73
CTSA-203ENST00000372459 ATF3P18847 181 aa32.12■■■□□ 2.73
CTSA-203ENST00000372459 ZKSCAN2Q63HK3 967 aa32.12■■■□□ 2.73
CTSA-203ENST00000372459 LTN1O94822 1766 aa32.11■■■□□ 2.73
CTSA-203ENST00000372459 FAM83GA6ND36 823 aa32.11■■■□□ 2.73
CTSA-203ENST00000372459 SSH1Q8WYL5 1049 aa32.11■■■□□ 2.73
CTSA-203ENST00000372459 CENPQQ7L2Z9 268 aaPredicted RBP32.1■■■□□ 2.73
CTSA-203ENST00000372459 KDM2BQ8NHM5 1336 aa32.1■■■□□ 2.73
CTSA-203ENST00000372459 MS4A1P11836 297 aa32.1■■■□□ 2.73
CTSA-203ENST00000372459 ALDH1L2Q3SY69 923 aa32.09■■■□□ 2.73
CTSA-203ENST00000372459 MBIPQ9NS73 344 aa32.09■■■□□ 2.73
CTSA-203ENST00000372459 AAMPQ13685 434 aa32.08■■■□□ 2.73
CTSA-203ENST00000372459 DCTN1Q14203 1278 aa32.07■■■□□ 2.72
CTSA-203ENST00000372459 LMTK3Q96Q04 1460 aa32.07■■■□□ 2.72
CTSA-203ENST00000372459 TRPM3Q9HCF6 1732 aaPredicted RBP32.07■■■□□ 2.72
CTSA-203ENST00000372459 MST1RQ04912 1400 aa32.07■■■□□ 2.72
CTSA-203ENST00000372459 XPCQ01831 940 aaPredicted RBP32.07■■■□□ 2.72
CTSA-203ENST00000372459 KRT28Q7Z3Y7 464 aa32.07■■■□□ 2.72
CTSA-203ENST00000372459 IP6K1Q92551 441 aa32.07■■■□□ 2.72
CTSA-203ENST00000372459 RLBP1P12271 317 aa32.05■■■□□ 2.72
CTSA-203ENST00000372459 CLUAP1Q96AJ1 413 aa32.05■■■□□ 2.72
CTSA-203ENST00000372459 KIF16BQ96L93 1317 aa32.04■■■□□ 2.72
CTSA-203ENST00000372459 TNNQ9UQP3 1299 aa32.04■■■□□ 2.72
CTSA-203ENST00000372459 SLIT3O75094 1523 aa32.03■■■□□ 2.72
CTSA-203ENST00000372459 FTSJ3Q8IY81 847 aaKnown RBP32.03■■■□□ 2.72
CTSA-203ENST00000372459 DZIP1LQ8IYY4 767 aaKnown RBP32.03■■■□□ 2.72
CTSA-203ENST00000372459 GAS2L2Q8NHY3 880 aa32.03■■■□□ 2.72
CTSA-203ENST00000372459 PHRF1Q9P1Y6 1649 aaKnown RBP32.03■■■□□ 2.72
CTSA-203ENST00000372459 TCERG1O14776 1098 aaKnown RBP32.03■■■□□ 2.72
CTSA-203ENST00000372459 MTHFSDQ2M296 383 aaKnown RBP32.03■■■□□ 2.72
CTSA-203ENST00000372459 CADPS2Q86UW7 1296 aa32.02■■■□□ 2.72
CTSA-203ENST00000372459 VAMP4O75379 141 aa32.01■■■□□ 2.72
CTSA-203ENST00000372459 LTV1Q96GA3 475 aaPredicted RBP32.01■■■□□ 2.72
CTSA-203ENST00000372459 ATF7IPQ6VMQ6 1270 aa32.01■■■□□ 2.71
CTSA-203ENST00000372459 IPO8O15397 1037 aaKnown RBP32■■■□□ 2.71
CTSA-203ENST00000372459 GCP02774 474 aa32■■■□□ 2.71
CTSA-203ENST00000372459 BRPF1P55201 1214 aaPredicted RBP32■■■□□ 2.71
CTSA-203ENST00000372459 MCM10Q7L590 875 aa32■■■□□ 2.71
CTSA-203ENST00000372459 NOB1Q9ULX3 412 aaKnown RBP32■■■□□ 2.71
CTSA-203ENST00000372459 MVPQ14764 893 aaKnown RBP31.99■■■□□ 2.71
CTSA-203ENST00000372459 LMOD2Q6P5Q4 547 aa31.99■■■□□ 2.71
CTSA-203ENST00000372459 STRCQ7RTU9 1775 aa31.99■■■□□ 2.71
CTSA-203ENST00000372459 USP19O94966 1318 aa31.99■■■□□ 2.71
CTSA-203ENST00000372459 MSH6P52701 1360 aa31.98■■■□□ 2.71
CTSA-203ENST00000372459 TRIM27P14373 513 aa31.98■■■□□ 2.71
CTSA-203ENST00000372459 RTF1Q92541 710 aaKnown RBP31.98■■■□□ 2.71
CTSA-203ENST00000372459 TSPYL6Q8N831 410 aa31.98■■■□□ 2.71
CTSA-203ENST00000372459 TWISTNBQ3B726 338 aaPredicted RBP31.97■■■□□ 2.71
CTSA-203ENST00000372459 CHL1O00533 1208 aa31.96■■■□□ 2.71
CTSA-203ENST00000372459 HTATSF1O43719 755 aaKnown RBP31.94■■■□□ 2.7
CTSA-203ENST00000372459 ARHGEF25Q86VW2 580 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms