RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 JCADQ9P266 1359 aa20■□□□□ 0.79
YIPF3-202ENST00000372422 GTF3C3Q9Y5Q9 886 aa20■□□□□ 0.79
YIPF3-202ENST00000372422 BLMP54132 1417 aaPredicted RBP19.99■□□□□ 0.79
YIPF3-202ENST00000372422 U2SURPO15042 1029 aaKnown RBP19.99■□□□□ 0.79
YIPF3-202ENST00000372422 ABCC6O95255 1503 aa19.99■□□□□ 0.79
YIPF3-202ENST00000372422 ABCA3Q99758 1704 aa19.98■□□□□ 0.79
YIPF3-202ENST00000372422 KIAA0232Q92628 1395 aa19.98■□□□□ 0.79
YIPF3-202ENST00000372422 U2AF1L5P0DN76 240 aaPredicted RBP19.98■□□□□ 0.79
YIPF3-202ENST00000372422 IL13P35225 146 aa19.98■□□□□ 0.79
YIPF3-202ENST00000372422 U2AF1Q01081 240 aaKnown RBP eCLIP19.98■□□□□ 0.79
YIPF3-202ENST00000372422 PRDM11Q9NQV5 511 aa19.98■□□□□ 0.79
YIPF3-202ENST00000372422 ADAMTS8Q9UP79 889 aa19.98■□□□□ 0.79
YIPF3-202ENST00000372422 SHPRHQ149N8 1683 aa19.98■□□□□ 0.79
YIPF3-202ENST00000372422 EIF4A2Q14240 407 aaKnown RBP19.97■□□□□ 0.79
YIPF3-202ENST00000372422 PNNQ9H307 717 aaKnown RBP19.96■□□□□ 0.79
YIPF3-202ENST00000372422 HSPA1LP34931 641 aa19.95■□□□□ 0.78
YIPF3-202ENST00000372422 CHRNA2Q15822 529 aa19.93■□□□□ 0.78
YIPF3-202ENST00000372422 LTV1Q96GA3 475 aaPredicted RBP19.93■□□□□ 0.78
YIPF3-202ENST00000372422 SPATA31A6Q5VVP1 1343 aa19.93■□□□□ 0.78
YIPF3-202ENST00000372422 ANKRD24Q8TF21 1146 aa19.91■□□□□ 0.78
YIPF3-202ENST00000372422 FCHSD2O94868 740 aa19.91■□□□□ 0.78
YIPF3-202ENST00000372422 NEFMP07197 916 aa19.91■□□□□ 0.78
YIPF3-202ENST00000372422 AXIN2Q9Y2T1 843 aa19.91■□□□□ 0.78
YIPF3-202ENST00000372422 NUTM2BA6NNL0 878 aaPredicted RBP19.9■□□□□ 0.78
YIPF3-202ENST00000372422 NUTM2EB1AL46 878 aaPredicted RBP19.9■□□□□ 0.78
YIPF3-202ENST00000372422 NUTM2AQ8IVF1 878 aaPredicted RBP19.9■□□□□ 0.78
YIPF3-202ENST00000372422 ERBB3P21860 1342 aa19.9■□□□□ 0.78
YIPF3-202ENST00000372422 COL18A1P39060 1754 aa19.89■□□□□ 0.78
YIPF3-202ENST00000372422 HNRNPUQ00839 825 aaKnown RBP eCLIP19.89■□□□□ 0.77
YIPF3-202ENST00000372422 IGSF1Q8N6C5 1336 aa19.89■□□□□ 0.77
YIPF3-202ENST00000372422 FAM83GA6ND36 823 aa19.88■□□□□ 0.77
YIPF3-202ENST00000372422 CSB-PGBD3P0DP91 1061 aa19.88■□□□□ 0.77
YIPF3-202ENST00000372422 RUNDC1Q96C34 613 aa19.88■□□□□ 0.77
YIPF3-202ENST00000372422 COL14A1Q05707 1796 aaKnown RBP19.88■□□□□ 0.77
YIPF3-202ENST00000372422 ADAMTS2O95450 1211 aa19.87■□□□□ 0.77
YIPF3-202ENST00000372422 HMOX1P09601 288 aa19.87■□□□□ 0.77
YIPF3-202ENST00000372422 SULT6B1Q6IMI4 303 aa19.87■□□□□ 0.77
YIPF3-202ENST00000372422 EYA1Q99502 592 aa19.87■□□□□ 0.77
YIPF3-202ENST00000372422 MAPK8IP3Q9UPT6 1336 aa19.87■□□□□ 0.77
YIPF3-202ENST00000372422 CCDC146Q8IYE0 955 aa19.87■□□□□ 0.77
YIPF3-202ENST00000372422 RGPD1P0DJD0 1748 aa19.87■□□□□ 0.77
YIPF3-202ENST00000372422 LMO7Q8WWI1 1683 aa19.86■□□□□ 0.77
YIPF3-202ENST00000372422 RSPH6AQ9H0K4 717 aa19.86■□□□□ 0.77
YIPF3-202ENST00000372422 PRKAR2BP31323 418 aa19.85■□□□□ 0.77
YIPF3-202ENST00000372422 EVA1CP58658 441 aa19.85■□□□□ 0.77
YIPF3-202ENST00000372422 FBXO41Q8TF61 875 aa19.85■□□□□ 0.77
YIPF3-202ENST00000372422 CAMTA1Q9Y6Y1 1673 aa19.84■□□□□ 0.77
YIPF3-202ENST00000372422 KDRP35968 1356 aa19.84■□□□□ 0.77
YIPF3-202ENST00000372422 COL5A2P05997 1499 aaPredicted RBP19.84■□□□□ 0.77
YIPF3-202ENST00000372422 FAM208AQ9UK61 1670 aaKnown RBP19.84■□□□□ 0.77
YIPF3-202ENST00000372422 RGPD5Q99666 1765 aa19.83■□□□□ 0.77
YIPF3-202ENST00000372422 NBPF6Q5VWK0 638 aa19.83■□□□□ 0.77
YIPF3-202ENST00000372422 NBPF4Q96M43 638 aa19.83■□□□□ 0.77
YIPF3-202ENST00000372422 NLRP2Q9NX02 1062 aa19.83■□□□□ 0.77
YIPF3-202ENST00000372422 BTG4Q9NY30 223 aa19.83■□□□□ 0.77
YIPF3-202ENST00000372422 NGEFQ8N5V2 710 aa19.83■□□□□ 0.76
YIPF3-202ENST00000372422 PLEKHF1Q96S99 279 aa19.83■□□□□ 0.76
YIPF3-202ENST00000372422 WDR17Q8IZU2 1322 aa19.82■□□□□ 0.76
YIPF3-202ENST00000372422 AEBP1Q8IUX7 1158 aa19.82■□□□□ 0.76
YIPF3-202ENST00000372422 APAF1O14727 1248 aa19.81■□□□□ 0.76
YIPF3-202ENST00000372422 STRN4Q9NRL3 753 aa19.81■□□□□ 0.76
YIPF3-202ENST00000372422 TOM1L2Q6ZVM7 507 aa19.8■□□□□ 0.76
YIPF3-202ENST00000372422 MEX3CQ5U5Q3 659 aaKnown RBP19.79■□□□□ 0.76
YIPF3-202ENST00000372422 TCP11L2Q8N4U5 519 aa19.79■□□□□ 0.76
YIPF3-202ENST00000372422 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
YIPF3-202ENST00000372422 ZBED9Q6R2W3 1325 aa19.79■□□□□ 0.76
YIPF3-202ENST00000372422 USHBP1Q8N6Y0 703 aa19.78■□□□□ 0.76
YIPF3-202ENST00000372422 NGLY1Q96IV0 654 aa19.78■□□□□ 0.76
YIPF3-202ENST00000372422 C8orf37Q96NL8 207 aa19.78■□□□□ 0.76
YIPF3-202ENST00000372422 PLCH1Q4KWH8 1693 aa19.77■□□□□ 0.76
YIPF3-202ENST00000372422 NCBP3Q53F19 620 aaKnown RBP19.77■□□□□ 0.76
YIPF3-202ENST00000372422 CRB1P82279 1406 aa19.77■□□□□ 0.75
YIPF3-202ENST00000372422 LRP6O75581 1613 aa19.77■□□□□ 0.75
YIPF3-202ENST00000372422 LARP1Q6PKG0 1096 aaKnown RBP19.76■□□□□ 0.75
YIPF3-202ENST00000372422 RAPGEF4Q8WZA2 1011 aa19.76■□□□□ 0.75
YIPF3-202ENST00000372422 CARD10Q9BWT7 1032 aa19.76■□□□□ 0.75
YIPF3-202ENST00000372422 NWD2Q9ULI1 1742 aa19.76■□□□□ 0.75
YIPF3-202ENST00000372422 SLIT2O94813 1529 aa19.76■□□□□ 0.75
YIPF3-202ENST00000372422 RGPD2P0DJD1 1756 aa19.75■□□□□ 0.75
YIPF3-202ENST00000372422 TMPOP42166 694 aaKnown RBP19.74■□□□□ 0.75
YIPF3-202ENST00000372422 NFE2L2Q16236 605 aa19.74■□□□□ 0.75
YIPF3-202ENST00000372422 PHACTR3Q96KR7 559 aa19.74■□□□□ 0.75
YIPF3-202ENST00000372422 SALL2Q9Y467 1007 aaPredicted RBP19.74■□□□□ 0.75
YIPF3-202ENST00000372422 PLEKHG2Q9H7P9 1386 aa19.74■□□□□ 0.75
YIPF3-202ENST00000372422 SENP3-EIF4A1A0A087X0R7 540 aa19.74■□□□□ 0.75
YIPF3-202ENST00000372422 NEUROD2Q15784 382 aa19.74■□□□□ 0.75
YIPF3-202ENST00000372422 GAS2L2Q8NHY3 880 aa19.74■□□□□ 0.75
YIPF3-202ENST00000372422 TATP17735 454 aaPredicted RBP19.73■□□□□ 0.75
YIPF3-202ENST00000372422 LMOD3Q0VAK6 560 aa19.73■□□□□ 0.75
YIPF3-202ENST00000372422 AMOTQ4VCS5 1084 aa19.73■□□□□ 0.75
YIPF3-202ENST00000372422 RRP7AQ9Y3A4 280 aaKnown RBP19.73■□□□□ 0.75
YIPF3-202ENST00000372422 RIPK4P57078 832 aa19.72■□□□□ 0.75
YIPF3-202ENST00000372422 CCDC27Q2M243 656 aa19.72■□□□□ 0.75
YIPF3-202ENST00000372422 PLEKHO1Q53GL0 409 aaPredicted RBP19.72■□□□□ 0.75
YIPF3-202ENST00000372422 UNC5CLQ8IV45 518 aa19.72■□□□□ 0.75
YIPF3-202ENST00000372422 FNBP4Q8N3X1 1017 aaPredicted RBP19.72■□□□□ 0.75
YIPF3-202ENST00000372422 PELP1Q8IZL8 1130 aaKnown RBP19.71■□□□□ 0.75
YIPF3-202ENST00000372422 NRAPQ86VF7 1730 aa19.71■□□□□ 0.75
YIPF3-202ENST00000372422 IL2RBP14784 551 aa19.69■□□□□ 0.74
YIPF3-202ENST00000372422 PDE3BQ13370 1112 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms