RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 DHX16O60231 1041 aaKnown RBP14.2□□□□□ -0.14
DEPDC1-201ENST00000370966 WAPLQ7Z5K2 1190 aa14.2□□□□□ -0.14
DEPDC1-201ENST00000370966 SDF4Q9BRK5 362 aa14.2□□□□□ -0.14
DEPDC1-201ENST00000370966 RALGAPBQ86X10 1494 aa14.2□□□□□ -0.14
DEPDC1-201ENST00000370966 WDR33Q9C0J8 1336 aaKnown RBP14.2□□□□□ -0.14
DEPDC1-201ENST00000370966 SRGAP3O43295 1099 aa14.2□□□□□ -0.14
DEPDC1-201ENST00000370966 DISP3Q9P2K9 1392 aa14.2□□□□□ -0.14
DEPDC1-201ENST00000370966 FANCAO15360 1455 aa14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 GNAT3A8MTJ3 354 aa14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 MCM4P33991 863 aa14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 KCNH5Q8NCM2 988 aa14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 NUP160Q12769 1436 aa14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 AMER1Q5JTC6 1135 aaPredicted RBP14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 AEBP1Q8IUX7 1158 aa14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 DNAJC2Q99543 621 aaKnown RBP14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 PDIA4P13667 645 aaKnown RBP14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 XBP1P17861 261 aa14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 SART3Q15020 963 aaKnown RBP14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 VPS53Q5VIR6 699 aa14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 RNF214Q8ND24 703 aa14.19□□□□□ -0.14
DEPDC1-201ENST00000370966 NOS1P29475 1434 aa14.18□□□□□ -0.14
DEPDC1-201ENST00000370966 KIF6Q6ZMV9 814 aa14.18□□□□□ -0.14
DEPDC1-201ENST00000370966 ATP10BO94823 1461 aa14.18□□□□□ -0.14
DEPDC1-201ENST00000370966 WASLO00401 505 aaPredicted RBP14.18□□□□□ -0.14
DEPDC1-201ENST00000370966 ZNF592Q92610 1267 aa14.18□□□□□ -0.14
DEPDC1-201ENST00000370966 THUMPD2Q9BTF0 503 aaKnown RBP14.18□□□□□ -0.14
DEPDC1-201ENST00000370966 RAPGEF6Q8TEU7 1601 aa14.17□□□□□ -0.14
DEPDC1-201ENST00000370966 NUP153P49790 1475 aaKnown RBP14.17□□□□□ -0.14
DEPDC1-201ENST00000370966 CABP4P57796 275 aa14.17□□□□□ -0.14
DEPDC1-201ENST00000370966 CCDC173Q0VFZ6 552 aa14.17□□□□□ -0.14
DEPDC1-201ENST00000370966 CCDC158Q5M9N0 1113 aa14.17□□□□□ -0.14
DEPDC1-201ENST00000370966 HOMER1Q86YM7 354 aa14.17□□□□□ -0.14
DEPDC1-201ENST00000370966 KINO60870 393 aaKnown RBP14.17□□□□□ -0.14
DEPDC1-201ENST00000370966 TSPY26PQ9H489 355 aa14.17□□□□□ -0.14
DEPDC1-201ENST00000370966 TCOF1Q13428 1488 aaKnown RBP14.17□□□□□ -0.14
DEPDC1-201ENST00000370966 CEP89Q96ST8 783 aa14.17□□□□□ -0.14
DEPDC1-201ENST00000370966 GPS2Q13227 327 aa14.16□□□□□ -0.14
DEPDC1-201ENST00000370966 IL16Q14005 1332 aa14.16□□□□□ -0.14
DEPDC1-201ENST00000370966 BTBD11A6QL63 1104 aa14.16□□□□□ -0.14
DEPDC1-201ENST00000370966 FIBPO43427 364 aa14.16□□□□□ -0.14
DEPDC1-201ENST00000370966 CCDC27Q2M243 656 aa14.16□□□□□ -0.14
DEPDC1-201ENST00000370966 NME9Q86XW9 330 aa14.16□□□□□ -0.14
DEPDC1-201ENST00000370966 CCAR2Q8N163 923 aaKnown RBP14.16□□□□□ -0.14
DEPDC1-201ENST00000370966 BRMS1Q9HCU9 246 aa14.16□□□□□ -0.14
DEPDC1-201ENST00000370966 DENND4BO75064 1496 aaPredicted RBP14.16□□□□□ -0.14
DEPDC1-201ENST00000370966 CCDC70Q6NSX1 233 aa14.15□□□□□ -0.14
DEPDC1-201ENST00000370966 PLCH2O75038 1416 aa14.15□□□□□ -0.14
DEPDC1-201ENST00000370966 ZSCAN31Q96LW9 406 aaPredicted RBP14.15□□□□□ -0.14
DEPDC1-201ENST00000370966 ZNF396Q96N95 335 aaPredicted RBP14.15□□□□□ -0.14
DEPDC1-201ENST00000370966 A0A0U1RQG5 324 aaPredicted RBP14.15□□□□□ -0.14
DEPDC1-201ENST00000370966 RBM33Q96EV2 1170 aaKnown RBP14.15□□□□□ -0.14
DEPDC1-201ENST00000370966 FOSBP53539 338 aa14.15□□□□□ -0.14
DEPDC1-201ENST00000370966 KIF1BPQ96EK5 621 aa14.15□□□□□ -0.14
DEPDC1-201ENST00000370966 PODXL2Q9NZ53 605 aa14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 TRIM27P14373 513 aa14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 BLOC1S2Q6QNY1 142 aa14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 TRIM34Q9BYJ4 488 aa14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 EMILIN1Q9Y6C2 1016 aa14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 ANKRD36BQ8N2N9 1353 aa14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 RAB11FIP3O75154 756 aa14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 KRT85P78386 507 aa14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 OLFM4Q6UX06 510 aa14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 MCM10Q7L590 875 aa14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 TAF7Q15545 349 aaPredicted RBP14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 IL27Q8NEV9 243 aa14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 IL1RAPL2Q9NP60 686 aa14.14□□□□□ -0.15
DEPDC1-201ENST00000370966 KDM5BQ9UGL1 1544 aa14.13□□□□□ -0.15
DEPDC1-201ENST00000370966 KRT32Q14532 448 aa14.13□□□□□ -0.15
DEPDC1-201ENST00000370966 AACSQ86V21 672 aa14.13□□□□□ -0.15
DEPDC1-201ENST00000370966 PRAG1Q86YV5 1406 aa14.13□□□□□ -0.15
DEPDC1-201ENST00000370966 TOM1L2Q6ZVM7 507 aa14.13□□□□□ -0.15
DEPDC1-201ENST00000370966 TRIM5Q9C035 493 aa14.13□□□□□ -0.15
DEPDC1-201ENST00000370966 FAM13BQ9NYF5 915 aa14.13□□□□□ -0.15
DEPDC1-201ENST00000370966 EXOC6BQ9Y2D4 811 aa14.13□□□□□ -0.15
DEPDC1-201ENST00000370966 DUOX2Q9NRD8 1548 aa14.13□□□□□ -0.15
DEPDC1-201ENST00000370966 ITSN2Q9NZM3 1697 aa14.13□□□□□ -0.15
DEPDC1-201ENST00000370966 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
DEPDC1-201ENST00000370966 GLRX3O76003 335 aaKnown RBP14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 SIL1Q9H173 461 aa14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 BRPF3Q9ULD4 1205 aa14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 PARD3Q8TEW0 1356 aa14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 FBXO31Q5XUX0 539 aaPredicted RBP14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 JMYQ8N9B5 988 aa14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 DCTN1Q14203 1278 aa14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 PCMTD1Q96MG8 357 aaPredicted RBP14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 GRPEL1Q9HAV7 217 aa14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 CNNM1Q9NRU3 951 aa14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 TTC21BQ7Z4L5 1316 aa14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 MX1P20591 662 aa14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 AMOTQ4VCS5 1084 aa14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 PRDM11Q9NQV5 511 aa14.12□□□□□ -0.15
DEPDC1-201ENST00000370966 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.11□□□□□ -0.15
DEPDC1-201ENST00000370966 MSH5O43196 834 aa14.11□□□□□ -0.15
DEPDC1-201ENST00000370966 TTC39AQ5SRH9 613 aa14.11□□□□□ -0.15
DEPDC1-201ENST00000370966 LARP1BQ659C4 914 aaKnown RBP14.11□□□□□ -0.15
DEPDC1-201ENST00000370966 PUS7Q96PZ0 661 aaKnown RBP14.11□□□□□ -0.15
DEPDC1-201ENST00000370966 CEP126Q9P2H0 1117 aa14.11□□□□□ -0.15
DEPDC1-201ENST00000370966 PTPRCP08575 1304 aa14.11□□□□□ -0.15
DEPDC1-201ENST00000370966 CCDC192P0DO97 292 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms