RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 SKAP1Q86WV1 359 aa16.47■□□□□ 0.23
GPC3-201ENST00000370818 USP31Q70CQ4 1352 aa16.47■□□□□ 0.23
GPC3-201ENST00000370818 CT47B1P0C2W7 299 aaPredicted RBP16.47■□□□□ 0.23
GPC3-201ENST00000370818 EXOSC9Q06265 439 aaKnown RBP16.47■□□□□ 0.23
GPC3-201ENST00000370818 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
GPC3-201ENST00000370818 ANKLE2Q86XL3 938 aa16.46■□□□□ 0.23
GPC3-201ENST00000370818 COG6Q9Y2V7 657 aa16.46■□□□□ 0.23
GPC3-201ENST00000370818 RLBP1P12271 317 aa16.45■□□□□ 0.22
GPC3-201ENST00000370818 TNNQ9UQP3 1299 aa16.45■□□□□ 0.22
GPC3-201ENST00000370818 ZNF142P52746 1687 aaPredicted RBP16.45■□□□□ 0.22
GPC3-201ENST00000370818 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
GPC3-201ENST00000370818 NALCNQ8IZF0 1738 aa16.44■□□□□ 0.22
GPC3-201ENST00000370818 NPM2Q86SE8 214 aaKnown RBP16.44■□□□□ 0.22
GPC3-201ENST00000370818 NGDNQ8NEJ9 315 aaKnown RBP16.44■□□□□ 0.22
GPC3-201ENST00000370818 ANKARQ7Z5J8 1434 aa16.44■□□□□ 0.22
GPC3-201ENST00000370818 RGPD8O14715 1765 aaPredicted RBP16.44■□□□□ 0.22
GPC3-201ENST00000370818 MS4A1P11836 297 aa16.43■□□□□ 0.22
GPC3-201ENST00000370818 EIF4A2Q14240 407 aaKnown RBP16.43■□□□□ 0.22
GPC3-201ENST00000370818 CLUAP1Q96AJ1 413 aa16.42■□□□□ 0.22
GPC3-201ENST00000370818 GSE1Q14687 1217 aa16.42■□□□□ 0.22
GPC3-201ENST00000370818 SSH1Q8WYL5 1049 aa16.41■□□□□ 0.22
GPC3-201ENST00000370818 THUMPD2Q9BTF0 503 aaKnown RBP16.41■□□□□ 0.22
GPC3-201ENST00000370818 PEAK1Q9H792 1746 aa16.41■□□□□ 0.22
GPC3-201ENST00000370818 HSP90AB2PQ58FF8 381 aa16.41■□□□□ 0.22
GPC3-201ENST00000370818 IGHDP01880 384 aa16.4■□□□□ 0.22
GPC3-201ENST00000370818 AEBP1Q8IUX7 1158 aa16.4■□□□□ 0.22
GPC3-201ENST00000370818 SMC4Q9NTJ3 1288 aa16.4■□□□□ 0.22
GPC3-201ENST00000370818 FMN2Q9NZ56 1722 aa16.4■□□□□ 0.22
GPC3-201ENST00000370818 SOX12O15370 315 aa16.39■□□□□ 0.22
GPC3-201ENST00000370818 PDE4AP27815 886 aa16.39■□□□□ 0.22
GPC3-201ENST00000370818 CHD2O14647 1828 aaKnown RBP16.39■□□□□ 0.21
GPC3-201ENST00000370818 MAP3K19Q56UN5 1328 aa16.39■□□□□ 0.21
GPC3-201ENST00000370818 ZKSCAN2Q63HK3 967 aa16.39■□□□□ 0.21
GPC3-201ENST00000370818 BACH2Q9BYV9 841 aa16.38■□□□□ 0.21
GPC3-201ENST00000370818 DNAJC5Q9H3Z4 198 aa16.38■□□□□ 0.21
GPC3-201ENST00000370818 SETD1BQ9UPS6 1966 aaKnown RBP16.38■□□□□ 0.21
GPC3-201ENST00000370818 PIK3C2AO00443 1686 aa16.38■□□□□ 0.21
GPC3-201ENST00000370818 SULT6B1Q6IMI4 303 aa16.38■□□□□ 0.21
GPC3-201ENST00000370818 RBM33Q96EV2 1170 aaKnown RBP16.37■□□□□ 0.21
GPC3-201ENST00000370818 PKNOX2Q96KN3 472 aa16.37■□□□□ 0.21
GPC3-201ENST00000370818 ZNF853P0CG23 659 aa16.37■□□□□ 0.21
GPC3-201ENST00000370818 TRIM27P14373 513 aa16.36■□□□□ 0.21
GPC3-201ENST00000370818 CALD1Q05682 793 aaKnown RBP16.36■□□□□ 0.21
GPC3-201ENST00000370818 AAMPQ13685 434 aa16.36■□□□□ 0.21
GPC3-201ENST00000370818 IFT57Q9NWB7 429 aa16.36■□□□□ 0.21
GPC3-201ENST00000370818 RGPD1P0DJD0 1748 aa16.36■□□□□ 0.21
GPC3-201ENST00000370818 FAM83GA6ND36 823 aa16.35■□□□□ 0.21
GPC3-201ENST00000370818 MVPQ14764 893 aaKnown RBP16.35■□□□□ 0.21
GPC3-201ENST00000370818 DZIP1LQ8IYY4 767 aaKnown RBP16.35■□□□□ 0.21
GPC3-201ENST00000370818 SBNO1A3KN83 1393 aa16.35■□□□□ 0.21
GPC3-201ENST00000370818 PCDHB15Q9Y5E8 787 aa16.35■□□□□ 0.21
GPC3-201ENST00000370818 FLT4P35916 1363 aa16.35■□□□□ 0.21
GPC3-201ENST00000370818 NLRP6P59044 892 aa16.34■□□□□ 0.21
GPC3-201ENST00000370818 GNAI1P63096 354 aa16.34■□□□□ 0.21
GPC3-201ENST00000370818 LMOD3Q0VAK6 560 aa16.34■□□□□ 0.21
GPC3-201ENST00000370818 MBIPQ9NS73 344 aa16.34■□□□□ 0.21
GPC3-201ENST00000370818 NOB1Q9ULX3 412 aaKnown RBP16.34■□□□□ 0.21
GPC3-201ENST00000370818 NPHP4O75161 1426 aaPredicted RBP16.34■□□□□ 0.21
GPC3-201ENST00000370818 ALDH1L2Q3SY69 923 aa16.34■□□□□ 0.21
GPC3-201ENST00000370818 ATF7IPQ6VMQ6 1270 aa16.34■□□□□ 0.21
GPC3-201ENST00000370818 DLG5Q8TDM6 1919 aa16.34■□□□□ 0.21
GPC3-201ENST00000370818 FTSJ3Q8IY81 847 aaKnown RBP16.33■□□□□ 0.21
GPC3-201ENST00000370818 DCTN1Q14203 1278 aa16.33■□□□□ 0.2
GPC3-201ENST00000370818 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
GPC3-201ENST00000370818 ADGRL3Q9HAR2 1447 aa16.33■□□□□ 0.2
GPC3-201ENST00000370818 VAMP4O75379 141 aa16.33■□□□□ 0.2
GPC3-201ENST00000370818 TSPYL6Q8N831 410 aa16.33■□□□□ 0.2
GPC3-201ENST00000370818 NUTM2GQ5VZR2 741 aa16.32■□□□□ 0.2
GPC3-201ENST00000370818 ZNF428Q96B54 188 aa16.32■□□□□ 0.2
GPC3-201ENST00000370818 PHF8Q9UPP1 1060 aa16.32■□□□□ 0.2
GPC3-201ENST00000370818 ARHGEF10O15013 1369 aa16.32■□□□□ 0.2
GPC3-201ENST00000370818 KIF16BQ96L93 1317 aa16.31■□□□□ 0.2
GPC3-201ENST00000370818 MARF1Q9Y4F3 1742 aaKnown RBP16.31■□□□□ 0.2
GPC3-201ENST00000370818 BRPF1P55201 1214 aaPredicted RBP16.31■□□□□ 0.2
GPC3-201ENST00000370818 AMPHP49418 695 aa16.31■□□□□ 0.2
GPC3-201ENST00000370818 NFKBIBQ15653 356 aa16.31■□□□□ 0.2
GPC3-201ENST00000370818 ABTB2Q8N961 1025 aa16.31■□□□□ 0.2
GPC3-201ENST00000370818 RGS3P49796 1198 aa16.3■□□□□ 0.2
GPC3-201ENST00000370818 KDRP35968 1356 aa16.29■□□□□ 0.2
GPC3-201ENST00000370818 USP54Q70EL1 1684 aa16.29■□□□□ 0.2
GPC3-201ENST00000370818 FAM43AQ8N2R8 423 aa16.29■□□□□ 0.2
GPC3-201ENST00000370818 EYA1Q99502 592 aa16.29■□□□□ 0.2
GPC3-201ENST00000370818 IGSF1Q8N6C5 1336 aa16.28■□□□□ 0.2
GPC3-201ENST00000370818 ELL2O00472 640 aaPredicted RBP16.28■□□□□ 0.2
GPC3-201ENST00000370818 IPO8O15397 1037 aaKnown RBP16.28■□□□□ 0.2
GPC3-201ENST00000370818 TMEM57Q8N5G2 664 aa16.28■□□□□ 0.2
GPC3-201ENST00000370818 C8orf58Q8NAV2 365 aa16.28■□□□□ 0.2
GPC3-201ENST00000370818 ITPRIPQ8IWB1 547 aa16.28■□□□□ 0.2
GPC3-201ENST00000370818 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
GPC3-201ENST00000370818 KIF24Q5T7B8 1368 aa16.27■□□□□ 0.2
GPC3-201ENST00000370818 HOXC9P31274 260 aa16.27■□□□□ 0.2
GPC3-201ENST00000370818 MCM10Q7L590 875 aa16.27■□□□□ 0.2
GPC3-201ENST00000370818 DDX19BQ9UMR2 479 aa16.27■□□□□ 0.2
GPC3-201ENST00000370818 TWISTNBQ3B726 338 aaPredicted RBP16.27■□□□□ 0.19
GPC3-201ENST00000370818 C8orf34Q49A92 452 aa16.27■□□□□ 0.19
GPC3-201ENST00000370818 ESCO1Q5FWF5 840 aa16.27■□□□□ 0.19
GPC3-201ENST00000370818 FOXO3O43524 673 aa16.25■□□□□ 0.19
GPC3-201ENST00000370818 MTHFSDQ2M296 383 aaKnown RBP16.25■□□□□ 0.19
GPC3-201ENST00000370818 CHL1O00533 1208 aa16.25■□□□□ 0.19
GPC3-201ENST00000370818 NWD1Q149M9 1564 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms