RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 NLRP6P59044 892 aa21■□□□□ 0.95
LMO4-201ENST00000370542 LARP1Q6PKG0 1096 aaKnown RBP21■□□□□ 0.95
LMO4-201ENST00000370542 THRAP3Q9Y2W1 955 aaKnown RBP21■□□□□ 0.95
LMO4-201ENST00000370542 COL5A2P05997 1499 aaPredicted RBP21■□□□□ 0.95
LMO4-201ENST00000370542 EVA1CP58658 441 aa20.99■□□□□ 0.95
LMO4-201ENST00000370542 AKAP12Q02952 1782 aa20.99■□□□□ 0.95
LMO4-201ENST00000370542 NUP188Q5SRE5 1749 aa20.98■□□□□ 0.95
LMO4-201ENST00000370542 TCP11L2Q8N4U5 519 aa20.98■□□□□ 0.95
LMO4-201ENST00000370542 TTC21BQ7Z4L5 1316 aa20.98■□□□□ 0.95
LMO4-201ENST00000370542 COL18A1P39060 1754 aa20.97■□□□□ 0.95
LMO4-201ENST00000370542 TTC21AQ8NDW8 1320 aa20.96■□□□□ 0.95
LMO4-201ENST00000370542 ARHGEF25Q86VW2 580 aa20.94■□□□□ 0.94
LMO4-201ENST00000370542 CARD11Q9BXL7 1154 aa20.94■□□□□ 0.94
LMO4-201ENST00000370542 USP35Q9P2H5 1018 aa20.94■□□□□ 0.94
LMO4-201ENST00000370542 CRB1P82279 1406 aa20.94■□□□□ 0.94
LMO4-201ENST00000370542 PUS7Q96PZ0 661 aaKnown RBP20.93■□□□□ 0.94
LMO4-201ENST00000370542 PARP4Q9UKK3 1724 aaKnown RBP20.92■□□□□ 0.94
LMO4-201ENST00000370542 KCNH5Q8NCM2 988 aa20.92■□□□□ 0.94
LMO4-201ENST00000370542 CD163L1Q9NR16 1453 aa20.92■□□□□ 0.94
LMO4-201ENST00000370542 USP31Q70CQ4 1352 aa20.91■□□□□ 0.94
LMO4-201ENST00000370542 MON2Q7Z3U7 1717 aa20.91■□□□□ 0.94
LMO4-201ENST00000370542 TONSLQ96HA7 1378 aa20.91■□□□□ 0.94
LMO4-201ENST00000370542 AXIN2Q9Y2T1 843 aa20.91■□□□□ 0.94
LMO4-201ENST00000370542 KTN1Q86UP2 1357 aaKnown RBP20.9■□□□□ 0.94
LMO4-201ENST00000370542 USP54Q70EL1 1684 aa20.89■□□□□ 0.94
LMO4-201ENST00000370542 NFAT5O94916 1531 aa20.89■□□□□ 0.94
LMO4-201ENST00000370542 PDE3BQ13370 1112 aa20.89■□□□□ 0.93
LMO4-201ENST00000370542 WDR17Q8IZU2 1322 aa20.88■□□□□ 0.93
LMO4-201ENST00000370542 ABCC6O95255 1503 aa20.88■□□□□ 0.93
LMO4-201ENST00000370542 C11orf95C9JLR9 678 aaPredicted RBP20.87■□□□□ 0.93
LMO4-201ENST00000370542 PTGER2P43116 358 aa20.86■□□□□ 0.93
LMO4-201ENST00000370542 PEAK1Q9H792 1746 aa20.86■□□□□ 0.93
LMO4-201ENST00000370542 TESK2Q96S53 571 aa20.85■□□□□ 0.93
LMO4-201ENST00000370542 SYT17Q9BSW7 474 aa20.84■□□□□ 0.93
LMO4-201ENST00000370542 TOM1L2Q6ZVM7 507 aa20.83■□□□□ 0.93
LMO4-201ENST00000370542 CDCA7Q9BWT1 371 aaPredicted RBP20.83■□□□□ 0.93
LMO4-201ENST00000370542 CARD10Q9BWT7 1032 aa20.83■□□□□ 0.93
LMO4-201ENST00000370542 PDGFDQ9GZP0 370 aaPredicted RBP20.83■□□□□ 0.93
LMO4-201ENST00000370542 BCL9O00512 1426 aa20.83■□□□□ 0.93
LMO4-201ENST00000370542 CASZ1Q86V15 1759 aa20.82■□□□□ 0.92
LMO4-201ENST00000370542 SLC12A5Q9H2X9 1139 aa20.82■□□□□ 0.92
LMO4-201ENST00000370542 RGPD5Q99666 1765 aa20.82■□□□□ 0.92
LMO4-201ENST00000370542 LRRC37A3O60309 1634 aa20.82■□□□□ 0.92
LMO4-201ENST00000370542 WNK3Q9BYP7 1800 aa20.81■□□□□ 0.92
LMO4-201ENST00000370542 EDC4Q6P2E9 1401 aaKnown RBP20.81■□□□□ 0.92
LMO4-201ENST00000370542 GIGYF1O75420 1035 aaPredicted RBP20.81■□□□□ 0.92
LMO4-201ENST00000370542 ANO8Q9HCE9 1232 aaPredicted RBP20.81■□□□□ 0.92
LMO4-201ENST00000370542 OVOS2A0A0G2JMS6 1433 aa20.8■□□□□ 0.92
LMO4-201ENST00000370542 OVOS2A0A0J9YW53 1432 aa20.8■□□□□ 0.92
LMO4-201ENST00000370542 OVOS2Q6IE36 1432 aa20.8■□□□□ 0.92
LMO4-201ENST00000370542 ZBTB7CA1YPR0 619 aa20.8■□□□□ 0.92
LMO4-201ENST00000370542 SLC24A1O60721 1099 aa20.8■□□□□ 0.92
LMO4-201ENST00000370542 DDB1Q16531 1140 aa20.8■□□□□ 0.92
LMO4-201ENST00000370542 FHDC1Q9C0D6 1143 aaPredicted RBP20.8■□□□□ 0.92
LMO4-201ENST00000370542 HDGFL2Q7Z4V5 671 aaPredicted RBP20.79■□□□□ 0.92
LMO4-201ENST00000370542 NME9Q86XW9 330 aa20.79■□□□□ 0.92
LMO4-201ENST00000370542 A0A1W2PP64 1363 aa20.79■□□□□ 0.92
LMO4-201ENST00000370542 MYOM1P52179 1685 aa20.79■□□□□ 0.92
LMO4-201ENST00000370542 SBF2Q86WG5 1849 aa20.78■□□□□ 0.92
LMO4-201ENST00000370542 PLSCR1O15162 318 aa20.78■□□□□ 0.92
LMO4-201ENST00000370542 ZBTB7AO95365 584 aa20.78■□□□□ 0.92
LMO4-201ENST00000370542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.78■□□□□ 0.92
LMO4-201ENST00000370542 TERF2IPQ9NYB0 399 aa20.78■□□□□ 0.92
LMO4-201ENST00000370542 CHD4Q14839 1912 aa20.77■□□□□ 0.92
LMO4-201ENST00000370542 CCDC7Q96M83 1385 aa20.77■□□□□ 0.92
LMO4-201ENST00000370542 ST20-MTHFSA0A0A6YYL1 179 aa20.77■□□□□ 0.92
LMO4-201ENST00000370542 TMC1Q8TDI8 760 aa20.77■□□□□ 0.92
LMO4-201ENST00000370542 MARCH10Q8NA82 808 aaPredicted RBP20.76■□□□□ 0.91
LMO4-201ENST00000370542 RGPD3A6NKT7 1758 aaPredicted RBP20.75■□□□□ 0.91
LMO4-201ENST00000370542 RGPD4Q7Z3J3 1758 aa20.75■□□□□ 0.91
LMO4-201ENST00000370542 SOX12O15370 315 aa20.75■□□□□ 0.91
LMO4-201ENST00000370542 ERBB3P21860 1342 aa20.75■□□□□ 0.91
LMO4-201ENST00000370542 BCL11BQ9C0K0 894 aaPredicted RBP20.74■□□□□ 0.91
LMO4-201ENST00000370542 ATF5Q9Y2D1 282 aaPredicted RBP20.74■□□□□ 0.91
LMO4-201ENST00000370542 SGIP1Q9BQI5 828 aa20.73■□□□□ 0.91
LMO4-201ENST00000370542 LTN1O94822 1766 aa20.72■□□□□ 0.91
LMO4-201ENST00000370542 CSB-PGBD3P0DP91 1061 aa20.71■□□□□ 0.91
LMO4-201ENST00000370542 PROM2Q8N271 834 aa20.71■□□□□ 0.91
LMO4-201ENST00000370542 TNS2Q63HR2 1409 aa20.7■□□□□ 0.9
LMO4-201ENST00000370542 EXOC5O00471 708 aa20.69■□□□□ 0.9
LMO4-201ENST00000370542 PTF1AQ7RTS3 328 aa20.69■□□□□ 0.9
LMO4-201ENST00000370542 TIMELESSQ9UNS1 1208 aa20.69■□□□□ 0.9
LMO4-201ENST00000370542 ANKRD36BQ8N2N9 1353 aa20.68■□□□□ 0.9
LMO4-201ENST00000370542 MAP3K5Q99683 1374 aa20.68■□□□□ 0.9
LMO4-201ENST00000370542 IP6K1Q92551 441 aa20.67■□□□□ 0.9
LMO4-201ENST00000370542 ANKRD24Q8TF21 1146 aa20.66■□□□□ 0.9
LMO4-201ENST00000370542 MTFR1LQ9H019 292 aa20.66■□□□□ 0.9
LMO4-201ENST00000370542 USP47Q96K76 1375 aa20.66■□□□□ 0.9
LMO4-201ENST00000370542 TMF1P82094 1093 aa20.64■□□□□ 0.89
LMO4-201ENST00000370542 NLRP2Q9NX02 1062 aa20.64■□□□□ 0.89
LMO4-201ENST00000370542 IL2RBP14784 551 aa20.63■□□□□ 0.89
LMO4-201ENST00000370542 GOLGB1Q14789 3259 aaKnown RBP20.63■□□□□ 0.89
LMO4-201ENST00000370542 SLC15A2Q16348 729 aa20.62■□□□□ 0.89
LMO4-201ENST00000370542 COG3Q96JB2 828 aa20.62■□□□□ 0.89
LMO4-201ENST00000370542 ARXQ96QS3 562 aa20.62■□□□□ 0.89
LMO4-201ENST00000370542 GPR162Q16538 588 aa20.61■□□□□ 0.89
LMO4-201ENST00000370542 SHANK3Q9BYB0 1731 aa20.61■□□□□ 0.89
LMO4-201ENST00000370542 FAM208AQ9UK61 1670 aaKnown RBP20.61■□□□□ 0.89
LMO4-201ENST00000370542 MAP3K19Q56UN5 1328 aa20.6■□□□□ 0.89
LMO4-201ENST00000370542 FYB1O15117 783 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms