RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 NEFHP12036 1026 aa13.41□□□□□ -0.26
PDCD11-201ENST00000369797 NASPP49321 788 aaPredicted RBP13.41□□□□□ -0.26
PDCD11-201ENST00000369797 NBPF1Q3BBV0 1214 aa13.41□□□□□ -0.26
PDCD11-201ENST00000369797 MYO6Q9UM54 1294 aa13.41□□□□□ -0.26
PDCD11-201ENST00000369797 CYP46A1Q9Y6A2 500 aa13.4□□□□□ -0.26
PDCD11-201ENST00000369797 BTBD11A6QL63 1104 aa13.4□□□□□ -0.26
PDCD11-201ENST00000369797 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.4□□□□□ -0.26
PDCD11-201ENST00000369797 LRRCC1Q9C099 1032 aa13.4□□□□□ -0.26
PDCD11-201ENST00000369797 MATR3P43243 847 aaKnown RBP eCLIP13.4□□□□□ -0.26
PDCD11-201ENST00000369797 AACSQ86V21 672 aa13.4□□□□□ -0.26
PDCD11-201ENST00000369797 PNISRQ8TF01 805 aaKnown RBP13.4□□□□□ -0.26
PDCD11-201ENST00000369797 CHMP4BP1P59074 171 aa13.4□□□□□ -0.26
PDCD11-201ENST00000369797 AAMPQ13685 434 aa13.4□□□□□ -0.26
PDCD11-201ENST00000369797 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
PDCD11-201ENST00000369797 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
PDCD11-201ENST00000369797 USP5P45974 858 aa13.39□□□□□ -0.27
PDCD11-201ENST00000369797 CCT4P50991 539 aaKnown RBP13.39□□□□□ -0.27
PDCD11-201ENST00000369797 LRP2BPQ9P2M1 347 aa13.39□□□□□ -0.27
PDCD11-201ENST00000369797 ZNF76P36508 570 aa13.39□□□□□ -0.27
PDCD11-201ENST00000369797 SERPINC1P01008 464 aa13.39□□□□□ -0.27
PDCD11-201ENST00000369797 ME1P48163 572 aa13.39□□□□□ -0.27
PDCD11-201ENST00000369797 IGF1RP08069 1367 aa13.39□□□□□ -0.27
PDCD11-201ENST00000369797 ZNHIT6Q9NWK9 470 aaKnown RBP13.38□□□□□ -0.27
PDCD11-201ENST00000369797 SPC24Q8NBT2 197 aa13.38□□□□□ -0.27
PDCD11-201ENST00000369797 DEF6Q9H4E7 631 aa13.38□□□□□ -0.27
PDCD11-201ENST00000369797 CCDC39Q9UFE4 941 aa13.38□□□□□ -0.27
PDCD11-201ENST00000369797 ZSCAN25Q6NSZ9 544 aa13.38□□□□□ -0.27
PDCD11-201ENST00000369797 JMYQ8N9B5 988 aa13.38□□□□□ -0.27
PDCD11-201ENST00000369797 SEPT11Q9NVA2 429 aaKnown RBP13.38□□□□□ -0.27
PDCD11-201ENST00000369797 CEP126Q9P2H0 1117 aa13.38□□□□□ -0.27
PDCD11-201ENST00000369797 BCAR3O75815 825 aa13.38□□□□□ -0.27
PDCD11-201ENST00000369797 SMARCA4P51532 1647 aa13.38□□□□□ -0.27
PDCD11-201ENST00000369797 ANKRD62A6NC57 917 aa13.37□□□□□ -0.27
PDCD11-201ENST00000369797 GCC1Q96CN9 775 aa13.37□□□□□ -0.27
PDCD11-201ENST00000369797 UBAC1Q9BSL1 405 aa13.37□□□□□ -0.27
PDCD11-201ENST00000369797 ABCF2Q9UG63 623 aa13.37□□□□□ -0.27
PDCD11-201ENST00000369797 SRGAP3O43295 1099 aa13.37□□□□□ -0.27
PDCD11-201ENST00000369797 IDH1O75874 414 aaKnown RBP13.37□□□□□ -0.27
PDCD11-201ENST00000369797 PIP4K2AP48426 406 aaPredicted RBP13.37□□□□□ -0.27
PDCD11-201ENST00000369797 TSPY26PQ9H489 355 aa13.37□□□□□ -0.27
PDCD11-201ENST00000369797 RAPGEF3O95398 923 aa13.37□□□□□ -0.27
PDCD11-201ENST00000369797 IGHMBP2P38935 993 aaKnown RBP13.37□□□□□ -0.27
PDCD11-201ENST00000369797 STIM1Q13586 685 aa13.37□□□□□ -0.27
PDCD11-201ENST00000369797 RTEL1-TNFRSF6BF6WH68 1400 aa13.37□□□□□ -0.27
PDCD11-201ENST00000369797 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
PDCD11-201ENST00000369797 NFKBIBQ15653 356 aa13.36□□□□□ -0.27
PDCD11-201ENST00000369797 PTCD1O75127 700 aaKnown RBP13.36□□□□□ -0.27
PDCD11-201ENST00000369797 DCTN1Q14203 1278 aa13.36□□□□□ -0.27
PDCD11-201ENST00000369797 RABEP1Q15276 862 aa13.36□□□□□ -0.27
PDCD11-201ENST00000369797 MAP7D2Q96T17 732 aa13.36□□□□□ -0.27
PDCD11-201ENST00000369797 IL1RAPL2Q9NP60 686 aa13.36□□□□□ -0.27
PDCD11-201ENST00000369797 MCM2P49736 904 aa13.36□□□□□ -0.27
PDCD11-201ENST00000369797 TMOD2Q9NZR1 351 aa13.36□□□□□ -0.27
PDCD11-201ENST00000369797 BRD4O60885 1362 aaPredicted RBP13.36□□□□□ -0.27
PDCD11-201ENST00000369797 ERCC4Q92889 916 aaPredicted RBP13.35□□□□□ -0.27
PDCD11-201ENST00000369797 SCAPERQ9BY12 1400 aa13.35□□□□□ -0.27
PDCD11-201ENST00000369797 NOL7Q9UMY1 257 aaKnown RBP13.35□□□□□ -0.27
PDCD11-201ENST00000369797 CUX1P39880 1505 aa13.35□□□□□ -0.27
PDCD11-201ENST00000369797 TRAK2O60296 914 aa13.35□□□□□ -0.27
PDCD11-201ENST00000369797 NOM1Q5C9Z4 860 aaKnown RBP13.35□□□□□ -0.27
PDCD11-201ENST00000369797 CWC27Q6UX04 472 aaKnown RBP13.35□□□□□ -0.27
PDCD11-201ENST00000369797 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
PDCD11-201ENST00000369797 MBD3O95983 291 aa13.34□□□□□ -0.27
PDCD11-201ENST00000369797 H0YHG0 523 aa13.34□□□□□ -0.27
PDCD11-201ENST00000369797 AXDND1Q5T1B0 1012 aaPredicted RBP13.34□□□□□ -0.27
PDCD11-201ENST00000369797 PAXIP1Q6ZW49 1069 aaPredicted RBP13.34□□□□□ -0.27
PDCD11-201ENST00000369797 MPNDQ8N594 471 aa13.34□□□□□ -0.27
PDCD11-201ENST00000369797 ANKRD1Q15327 319 aa13.34□□□□□ -0.27
PDCD11-201ENST00000369797 ADAMTS2O95450 1211 aa13.34□□□□□ -0.27
PDCD11-201ENST00000369797 MIS18AQ9NYP9 233 aa13.34□□□□□ -0.27
PDCD11-201ENST00000369797 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
PDCD11-201ENST00000369797 PRG4Q92954 1404 aaPredicted RBP13.34□□□□□ -0.27
PDCD11-201ENST00000369797 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.27
PDCD11-201ENST00000369797 LARP1BQ659C4 914 aaKnown RBP13.33□□□□□ -0.27
PDCD11-201ENST00000369797 BMP2KQ9NSY1 1161 aaPredicted RBP13.33□□□□□ -0.28
PDCD11-201ENST00000369797 STARD3NLO95772 234 aa13.33□□□□□ -0.28
PDCD11-201ENST00000369797 FAM177A1Q8N128 213 aaPredicted RBP13.33□□□□□ -0.28
PDCD11-201ENST00000369797 NEBLO76041 1014 aa13.33□□□□□ -0.28
PDCD11-201ENST00000369797 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
PDCD11-201ENST00000369797 TNMDQ9H2S6 317 aa13.33□□□□□ -0.28
PDCD11-201ENST00000369797 SEPT7Q16181 437 aaKnown RBP13.33□□□□□ -0.28
PDCD11-201ENST00000369797 METTL24Q5JXM2 366 aa13.33□□□□□ -0.28
PDCD11-201ENST00000369797 ZPR1O75312 459 aa13.32□□□□□ -0.28
PDCD11-201ENST00000369797 AIDAQ96BJ3 306 aa13.32□□□□□ -0.28
PDCD11-201ENST00000369797 MRE11P49959 708 aa13.32□□□□□ -0.28
PDCD11-201ENST00000369797 CCDC181Q5TID7 509 aa13.32□□□□□ -0.28
PDCD11-201ENST00000369797 CCDC191Q8NCU4 936 aa13.32□□□□□ -0.28
PDCD11-201ENST00000369797 ERLIN2O94905 339 aa13.32□□□□□ -0.28
PDCD11-201ENST00000369797 JAKMIP1Q96N16 626 aaKnown RBP13.32□□□□□ -0.28
PDCD11-201ENST00000369797 NCOA2Q15596 1464 aa13.32□□□□□ -0.28
PDCD11-201ENST00000369797 WDR78Q5VTH9 848 aa13.31□□□□□ -0.28
PDCD11-201ENST00000369797 CRACR2BQ8N4Y2 399 aaPredicted RBP13.31□□□□□ -0.28
PDCD11-201ENST00000369797 DACH1Q9UI36 760 aa13.31□□□□□ -0.28
PDCD11-201ENST00000369797 SYNJ2O15056 1496 aa13.31□□□□□ -0.28
PDCD11-201ENST00000369797 AEBP1Q8IUX7 1158 aa13.31□□□□□ -0.28
PDCD11-201ENST00000369797 SCLT1Q96NL6 688 aa13.31□□□□□ -0.28
PDCD11-201ENST00000369797 SSR1P43307 286 aaKnown RBP13.31□□□□□ -0.28
PDCD11-201ENST00000369797 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
PDCD11-201ENST00000369797 LUC7LQ9NQ29 371 aaKnown RBP13.31□□□□□ -0.28
PDCD11-201ENST00000369797 PDRG1Q9NUG6 133 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms