RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 ADGRB2O60241 1585 aa15.17■□□□□ 0.02
PHGDH-201ENST00000369407 VAMP4O75379 141 aa15.17■□□□□ 0.02
PHGDH-201ENST00000369407 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-201ENST00000369407 GPT2Q8TD30 523 aa15.17■□□□□ 0.02
PHGDH-201ENST00000369407 SMARCA5O60264 1052 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-201ENST00000369407 ALDH1L2Q3SY69 923 aa15.16■□□□□ 0.02
PHGDH-201ENST00000369407 PLEKHM2Q8IWE5 1019 aa15.16■□□□□ 0.02
PHGDH-201ENST00000369407 SYCE3A1L190 88 aa15.16■□□□□ 0.02
PHGDH-201ENST00000369407 ATP7AQ04656 1500 aa15.15■□□□□ 0.02
PHGDH-201ENST00000369407 IL16Q14005 1332 aa15.15■□□□□ 0.02
PHGDH-201ENST00000369407 UQCRHLA0A096LP55 91 aa15.15■□□□□ 0.02
PHGDH-201ENST00000369407 UQCRHP07919 91 aa15.15■□□□□ 0.02
PHGDH-201ENST00000369407 ZNF445P59923 1031 aa15.15■□□□□ 0.02
PHGDH-201ENST00000369407 NOL8Q76FK4 1167 aaKnown RBP15.15■□□□□ 0.02
PHGDH-201ENST00000369407 KIF1BO60333 1816 aa15.15■□□□□ 0.02
PHGDH-201ENST00000369407 NRXN1Q9ULB1 1477 aa15.14■□□□□ 0.01
PHGDH-201ENST00000369407 CFAP74Q9C0B2 1584 aa15.14■□□□□ 0.01
PHGDH-201ENST00000369407 RABEP1Q15276 862 aa15.14■□□□□ 0.01
PHGDH-201ENST00000369407 JARID2Q92833 1246 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-201ENST00000369407 TMEM63CQ9P1W3 806 aa15.14■□□□□ 0.01
PHGDH-201ENST00000369407 TULP4Q9NRJ4 1543 aa15.14■□□□□ 0.01
PHGDH-201ENST00000369407 DEPDC5O75140 1603 aa15.13■□□□□ 0.01
PHGDH-201ENST00000369407 MYO3AQ8NEV4 1616 aa15.13■□□□□ 0.01
PHGDH-201ENST00000369407 DCTN1Q14203 1278 aa15.13■□□□□ 0.01
PHGDH-201ENST00000369407 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
PHGDH-201ENST00000369407 C8orf58Q8NAV2 365 aa15.13■□□□□ 0.01
PHGDH-201ENST00000369407 USP26Q9BXU7 913 aa15.13■□□□□ 0.01
PHGDH-201ENST00000369407 ZDHHC9Q9Y397 364 aa15.13■□□□□ 0.01
PHGDH-201ENST00000369407 ADGRL1O94910 1474 aa15.13■□□□□ 0.01
PHGDH-201ENST00000369407 FAM83GA6ND36 823 aa15.13■□□□□ 0.01
PHGDH-201ENST00000369407 NUCB2P80303 420 aa15.13■□□□□ 0.01
PHGDH-201ENST00000369407 ZCCHC11Q5TAX3 1644 aaKnown RBP15.12■□□□□ 0.01
PHGDH-201ENST00000369407 MBIPQ9NS73 344 aa15.12■□□□□ 0.01
PHGDH-201ENST00000369407 NOL7Q9UMY1 257 aaKnown RBP15.12■□□□□ 0.01
PHGDH-201ENST00000369407 ADGRB1O14514 1584 aa15.12■□□□□ 0.01
PHGDH-201ENST00000369407 FANCAO15360 1455 aa15.12■□□□□ 0.01
PHGDH-201ENST00000369407 CLEC17AQ6ZS10 378 aa15.12■□□□□ 0.01
PHGDH-201ENST00000369407 NSD2O96028 1365 aa15.11■□□□□ 0.01
PHGDH-201ENST00000369407 VWDEQ8N2E2 1590 aa15.11■□□□□ 0.01
PHGDH-201ENST00000369407 TWISTNBQ3B726 338 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-201ENST00000369407 TTC22Q5TAA0 569 aa15.11■□□□□ 0.01
PHGDH-201ENST00000369407 CYP2E1P05181 493 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-201ENST00000369407 COL3A1P02461 1466 aaPredicted RBP15.1■□□□□ 0.01
PHGDH-201ENST00000369407 SDSP20132 328 aa15.1■□□□□ 0.01
PHGDH-201ENST00000369407 KRT24Q2M2I5 525 aa15.1■□□□□ 0.01
PHGDH-201ENST00000369407 BBXQ8WY36 941 aaPredicted RBP15.1■□□□□ 0.01
PHGDH-201ENST00000369407 MROH1Q8NDA8 1641 aa15.1■□□□□ 0.01
PHGDH-201ENST00000369407 CABP1Q9NZU7 370 aa15.1■□□□□ 0.01
PHGDH-201ENST00000369407 PRAM1Q96QH2 718 aa15.1■□□□□ 0.01
PHGDH-201ENST00000369407 PPRC1Q5VV67 1664 aaKnown RBP15.09■□□□□ 0.01
PHGDH-201ENST00000369407 IBTKQ9P2D0 1353 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-201ENST00000369407 EFCAB6Q5THR3 1501 aa15.09■□□□□ 0.01
PHGDH-201ENST00000369407 TSC1Q92574 1164 aa15.09■□□□□ 0.01
PHGDH-201ENST00000369407 PRDM4Q9UKN5 801 aa15.09■□□□□ 0.01
PHGDH-201ENST00000369407 TSHZ3Q63HK5 1081 aa15.09■□□□□ 0.01
PHGDH-201ENST00000369407 TERF2IPQ9NYB0 399 aa15.09■□□□□ 0.01
PHGDH-201ENST00000369407 CHD1O14646 1710 aa15.08■□□□□ 0.01
PHGDH-201ENST00000369407 IFT172Q9UG01 1749 aa15.08■□□□□ 0.01
PHGDH-201ENST00000369407 NPATQ14207 1427 aa15.08■□□□□ 0.01
PHGDH-201ENST00000369407 FCHSD2O94868 740 aa15.08■□□□□ 0.01
PHGDH-201ENST00000369407 PDLIM2Q96JY6 352 aa15.08■□□□□ 0.01
PHGDH-201ENST00000369407 ZKSCAN5Q9Y2L8 839 aa15.08■□□□□ 0.01
PHGDH-201ENST00000369407 GDPD2Q9HCC8 539 aa15.08■□□□□ 0
PHGDH-201ENST00000369407 MED14O60244 1454 aa15.08■□□□□ 0
PHGDH-201ENST00000369407 INTS3Q68E01 1043 aaKnown RBP15.08■□□□□ 0
PHGDH-201ENST00000369407 EMILIN1Q9Y6C2 1016 aa15.08■□□□□ 0
PHGDH-201ENST00000369407 ADGRB3O60242 1522 aa15.07■□□□□ 0
PHGDH-201ENST00000369407 PTMAP06454 111 aaKnown RBP15.07■□□□□ 0
PHGDH-201ENST00000369407 NFE2L2Q16236 605 aa15.07■□□□□ 0
PHGDH-201ENST00000369407 ZNF830Q96NB3 372 aaPredicted RBP15.07■□□□□ 0
PHGDH-201ENST00000369407 SETBP1Q9Y6X0 1596 aa15.07■□□□□ 0
PHGDH-201ENST00000369407 ABCC4O15439 1325 aa15.07■□□□□ 0
PHGDH-201ENST00000369407 ZC3H13Q5T200 1668 aaKnown RBP15.07■□□□□ 0
PHGDH-201ENST00000369407 ST18O60284 1047 aa15.07■□□□□ 0
PHGDH-201ENST00000369407 ZNF500O60304 480 aaPredicted RBP15.07■□□□□ 0
PHGDH-201ENST00000369407 POLKQ9UBT6 870 aa15.07■□□□□ 0
PHGDH-201ENST00000369407 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
PHGDH-201ENST00000369407 DCTPP1Q9H773 170 aa15.06■□□□□ 0
PHGDH-201ENST00000369407 LRSAM1Q6UWE0 723 aa15.06■□□□□ 0
PHGDH-201ENST00000369407 FAM177BA6PVY3 158 aa15.06■□□□□ 0
PHGDH-201ENST00000369407 VGFO15240 615 aaPredicted RBP15.06■□□□□ 0
PHGDH-201ENST00000369407 CHMP4BQ9H444 224 aaKnown RBP15.06■□□□□ 0
PHGDH-201ENST00000369407 ZRANB1Q9UGI0 708 aa15.06■□□□□ 0
PHGDH-201ENST00000369407 USP32Q8NFA0 1604 aa15.05■□□□□ 0
PHGDH-201ENST00000369407 NEK4P51957 841 aa15.05■□□□□ -0
PHGDH-201ENST00000369407 GNAI1P63096 354 aa15.05■□□□□ -0
PHGDH-201ENST00000369407 ARHGAP45Q92619 1136 aa15.05■□□□□ -0
PHGDH-201ENST00000369407 DNTTIP2Q5QJE6 756 aaKnown RBP15.04■□□□□ -0
PHGDH-201ENST00000369407 HDGFL2Q7Z4V5 671 aaPredicted RBP15.04■□□□□ -0
PHGDH-201ENST00000369407 GLI2P10070 1586 aa15.04■□□□□ -0
PHGDH-201ENST00000369407 LRRC7Q96NW7 1537 aa15.04■□□□□ -0
PHGDH-201ENST00000369407 C17orf53Q8N3J3 647 aaPredicted RBP15.04■□□□□ -0
PHGDH-201ENST00000369407 INO80Q9ULG1 1556 aaPredicted RBP15.04■□□□□ -0
PHGDH-201ENST00000369407 CDK19Q9BWU1 502 aa15.04■□□□□ -0
PHGDH-201ENST00000369407 PTCH1Q13635 1447 aa15.03■□□□□ -0
PHGDH-201ENST00000369407 BRPF1P55201 1214 aaPredicted RBP15.03■□□□□ -0
PHGDH-201ENST00000369407 HS1BP3Q53T59 392 aa15.03■□□□□ -0
PHGDH-201ENST00000369407 API5Q9BZZ5 524 aaKnown RBP15.03■□□□□ -0
PHGDH-201ENST00000369407 CWC22Q9HCG8 908 aaKnown RBP15.03■□□□□ -0
PHGDH-201ENST00000369407 NEURL4Q96JN8 1562 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms