RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 TOPAZ1Q8N9V7 1692 aa12.98□□□□□ -0.33
TPM3-209ENST00000368527 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
TPM3-209ENST00000368527 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
TPM3-209ENST00000368527 PIK3R4Q99570 1358 aa12.96□□□□□ -0.33
TPM3-209ENST00000368527 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.33
TPM3-209ENST00000368527 RLBP1P12271 317 aa12.96□□□□□ -0.33
TPM3-209ENST00000368527 TSR2Q969E8 191 aaKnown RBP12.96□□□□□ -0.33
TPM3-209ENST00000368527 PCDHB15Q9Y5E8 787 aa12.96□□□□□ -0.33
TPM3-209ENST00000368527 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
TPM3-209ENST00000368527 ZNF853P0CG23 659 aa12.95□□□□□ -0.34
TPM3-209ENST00000368527 TRIM27P14373 513 aa12.95□□□□□ -0.34
TPM3-209ENST00000368527 THEMISQ8N1K5 641 aaPredicted RBP12.95□□□□□ -0.34
TPM3-209ENST00000368527 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
TPM3-209ENST00000368527 NME9Q86XW9 330 aa12.94□□□□□ -0.34
TPM3-209ENST00000368527 ITPRIPQ8IWB1 547 aa12.94□□□□□ -0.34
TPM3-209ENST00000368527 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
TPM3-209ENST00000368527 API5Q9BZZ5 524 aaKnown RBP12.94□□□□□ -0.34
TPM3-209ENST00000368527 NOB1Q9ULX3 412 aaKnown RBP12.94□□□□□ -0.34
TPM3-209ENST00000368527 PDZRN3Q9UPQ7 1066 aa12.94□□□□□ -0.34
TPM3-209ENST00000368527 OVOS2A0A0J9YW53 1432 aa12.94□□□□□ -0.34
TPM3-209ENST00000368527 USP6P35125 1406 aa12.94□□□□□ -0.34
TPM3-209ENST00000368527 OVOS2Q6IE36 1432 aa12.94□□□□□ -0.34
TPM3-209ENST00000368527 ANKARQ7Z5J8 1434 aa12.94□□□□□ -0.34
TPM3-209ENST00000368527 USP31Q70CQ4 1352 aa12.94□□□□□ -0.34
TPM3-209ENST00000368527 SMC5Q8IY18 1101 aa12.93□□□□□ -0.34
TPM3-209ENST00000368527 BCL2L13Q9BXK5 485 aa12.93□□□□□ -0.34
TPM3-209ENST00000368527 ZBTB40Q9NUA8 1239 aa12.93□□□□□ -0.34
TPM3-209ENST00000368527 RIMS1Q86UR5 1692 aaKnown RBP12.93□□□□□ -0.34
TPM3-209ENST00000368527 EMILIN1Q9Y6C2 1016 aa12.92□□□□□ -0.34
TPM3-209ENST00000368527 NALCNQ8IZF0 1738 aa12.91□□□□□ -0.34
TPM3-209ENST00000368527 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
TPM3-209ENST00000368527 ARHGEF10O15013 1369 aa12.91□□□□□ -0.34
TPM3-209ENST00000368527 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.34
TPM3-209ENST00000368527 SSH2Q76I76 1423 aa12.9□□□□□ -0.34
TPM3-209ENST00000368527 VAMP4O75379 141 aa12.9□□□□□ -0.34
TPM3-209ENST00000368527 NBR1Q14596 966 aa12.9□□□□□ -0.34
TPM3-209ENST00000368527 KIAA0232Q92628 1395 aa12.9□□□□□ -0.34
TPM3-209ENST00000368527 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.9□□□□□ -0.34
TPM3-209ENST00000368527 ACEP12821 1306 aa12.89□□□□□ -0.35
TPM3-209ENST00000368527 DEKP35659 375 aaKnown RBP12.89□□□□□ -0.35
TPM3-209ENST00000368527 TMEM57Q8N5G2 664 aa12.89□□□□□ -0.35
TPM3-209ENST00000368527 MRPL50Q8N5N7 158 aaKnown RBP12.89□□□□□ -0.35
TPM3-209ENST00000368527 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
TPM3-209ENST00000368527 PTPRUQ92729 1446 aa12.88□□□□□ -0.35
TPM3-209ENST00000368527 HMOX1P09601 288 aa12.88□□□□□ -0.35
TPM3-209ENST00000368527 SKAP1Q86WV1 359 aa12.88□□□□□ -0.35
TPM3-209ENST00000368527 PHACTR3Q96KR7 559 aa12.88□□□□□ -0.35
TPM3-209ENST00000368527 ABCC4O15439 1325 aa12.88□□□□□ -0.35
TPM3-209ENST00000368527 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
TPM3-209ENST00000368527 HTATSF1O43719 755 aaKnown RBP12.87□□□□□ -0.35
TPM3-209ENST00000368527 LTKP29376 864 aa12.87□□□□□ -0.35
TPM3-209ENST00000368527 TWISTNBQ3B726 338 aaPredicted RBP12.87□□□□□ -0.35
TPM3-209ENST00000368527 TBC1D32Q96NH3 1257 aa12.87□□□□□ -0.35
TPM3-209ENST00000368527 AMOTL2Q9Y2J4 779 aa12.87□□□□□ -0.35
TPM3-209ENST00000368527 FLT4P35916 1363 aa12.86□□□□□ -0.35
TPM3-209ENST00000368527 XRN1Q8IZH2 1706 aaKnown RBP12.86□□□□□ -0.35
TPM3-209ENST00000368527 NUCB1Q02818 461 aa12.86□□□□□ -0.35
TPM3-209ENST00000368527 EIF4A2Q14240 407 aaKnown RBP12.86□□□□□ -0.35
TPM3-209ENST00000368527 MBIPQ9NS73 344 aa12.86□□□□□ -0.35
TPM3-209ENST00000368527 TNNQ9UQP3 1299 aa12.86□□□□□ -0.35
TPM3-209ENST00000368527 LAS1LQ9Y4W2 734 aaKnown RBP12.86□□□□□ -0.35
TPM3-209ENST00000368527 FER1L4A9Z1Z3 1794 aa12.86□□□□□ -0.35
TPM3-209ENST00000368527 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
TPM3-209ENST00000368527 USP19O94966 1318 aa12.86□□□□□ -0.35
TPM3-209ENST00000368527 PTPRCP08575 1304 aa12.86□□□□□ -0.35
TPM3-209ENST00000368527 RGPD1P0DJD0 1748 aa12.85□□□□□ -0.35
TPM3-209ENST00000368527 CHMP4AQ9BY43 222 aa12.85□□□□□ -0.35
TPM3-209ENST00000368527 CHL1O00533 1208 aa12.84□□□□□ -0.35
TPM3-209ENST00000368527 ZBTB7BO15156 539 aaPredicted RBP12.84□□□□□ -0.35
TPM3-209ENST00000368527 RRS1Q15050 365 aaKnown RBP12.84□□□□□ -0.35
TPM3-209ENST00000368527 BABAM1Q9NWV8 329 aa12.84□□□□□ -0.35
TPM3-209ENST00000368527 KDRP35968 1356 aa12.83□□□□□ -0.36
TPM3-209ENST00000368527 SULT6B1Q6IMI4 303 aa12.83□□□□□ -0.36
TPM3-209ENST00000368527 CHD1LQ86WJ1 897 aa12.83□□□□□ -0.36
TPM3-209ENST00000368527 GAS2L2Q8NHY3 880 aa12.83□□□□□ -0.36
TPM3-209ENST00000368527 BMP2KLQ5H9B9 411 aa12.82□□□□□ -0.36
TPM3-209ENST00000368527 INTS3Q68E01 1043 aaKnown RBP12.82□□□□□ -0.36
TPM3-209ENST00000368527 NGDNQ8NEJ9 315 aaKnown RBP12.82□□□□□ -0.36
TPM3-209ENST00000368527 RTF1Q92541 710 aaKnown RBP12.82□□□□□ -0.36
TPM3-209ENST00000368527 ZRANB1Q9UGI0 708 aa12.82□□□□□ -0.36
TPM3-209ENST00000368527 RTL1A6NKG5 1358 aa12.81□□□□□ -0.36
TPM3-209ENST00000368527 DLG5Q8TDM6 1919 aa12.8□□□□□ -0.36
TPM3-209ENST00000368527 NFKBIBQ15653 356 aa12.8□□□□□ -0.36
TPM3-209ENST00000368527 RPAP2Q8IXW5 612 aaPredicted RBP12.8□□□□□ -0.36
TPM3-209ENST00000368527 SLC26A8Q96RN1 970 aa12.8□□□□□ -0.36
TPM3-209ENST00000368527 FMN2Q9NZ56 1722 aa12.79□□□□□ -0.36
TPM3-209ENST00000368527 CEP170BQ9Y4F5 1589 aaPredicted RBP12.79□□□□□ -0.36
TPM3-209ENST00000368527 C22orf23Q9BZE7 217 aa12.79□□□□□ -0.36
TPM3-209ENST00000368527 IGSF1Q8N6C5 1336 aa12.79□□□□□ -0.36
TPM3-209ENST00000368527 NCKAP5LQ9HCH0 1330 aa12.79□□□□□ -0.36
TPM3-209ENST00000368527 FBLN1P23142 703 aa12.78□□□□□ -0.36
TPM3-209ENST00000368527 C8orf58Q8NAV2 365 aa12.78□□□□□ -0.36
TPM3-209ENST00000368527 PEAK1Q9H792 1746 aa12.78□□□□□ -0.36
TPM3-209ENST00000368527 MAP3K19Q56UN5 1328 aa12.78□□□□□ -0.36
TPM3-209ENST00000368527 CRB1P82279 1406 aa12.78□□□□□ -0.36
TPM3-209ENST00000368527 HMMRO75330 724 aa12.77□□□□□ -0.37
TPM3-209ENST00000368527 AMPHP49418 695 aa12.77□□□□□ -0.37
TPM3-209ENST00000368527 RBM25P49756 843 aaKnown RBP12.77□□□□□ -0.37
TPM3-209ENST00000368527 TSPYL6Q8N831 410 aa12.77□□□□□ -0.37
TPM3-209ENST00000368527 THUMPD2Q9BTF0 503 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms