RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 OVOS2Q6IE36 1432 aa20.98■□□□□ 0.95
CTSD-202ENST00000367196 SLC24A1O60721 1099 aa20.98■□□□□ 0.95
CTSD-202ENST00000367196 HDGFL2Q7Z4V5 671 aaPredicted RBP20.98■□□□□ 0.95
CTSD-202ENST00000367196 ARHGEF25Q86VW2 580 aa20.98■□□□□ 0.95
CTSD-202ENST00000367196 CDCA7Q9BWT1 371 aaPredicted RBP20.98■□□□□ 0.95
CTSD-202ENST00000367196 LRRC37A3O60309 1634 aa20.97■□□□□ 0.95
CTSD-202ENST00000367196 APBA3O96018 575 aa20.97■□□□□ 0.95
CTSD-202ENST00000367196 NFAT5O94916 1531 aa20.97■□□□□ 0.95
CTSD-202ENST00000367196 TMC1Q8TDI8 760 aa20.96■□□□□ 0.95
CTSD-202ENST00000367196 PUS7Q96PZ0 661 aaKnown RBP20.96■□□□□ 0.95
CTSD-202ENST00000367196 PSDA5PKW4 1024 aaPredicted RBP20.95■□□□□ 0.94
CTSD-202ENST00000367196 SOX12O15370 315 aa20.95■□□□□ 0.94
CTSD-202ENST00000367196 CSB-PGBD3P0DP91 1061 aa20.95■□□□□ 0.94
CTSD-202ENST00000367196 EZH2Q15910 746 aaKnown RBP20.95■□□□□ 0.94
CTSD-202ENST00000367196 DDB1Q16531 1140 aa20.95■□□□□ 0.94
CTSD-202ENST00000367196 CAMKK2Q96RR4 588 aa20.95■□□□□ 0.94
CTSD-202ENST00000367196 TERF2IPQ9NYB0 399 aa20.95■□□□□ 0.94
CTSD-202ENST00000367196 USP31Q70CQ4 1352 aa20.95■□□□□ 0.94
CTSD-202ENST00000367196 NINLQ9Y2I6 1382 aa20.95■□□□□ 0.94
CTSD-202ENST00000367196 RREB1Q92766 1687 aa20.94■□□□□ 0.94
CTSD-202ENST00000367196 RGPD5Q99666 1765 aa20.94■□□□□ 0.94
CTSD-202ENST00000367196 EDC4Q6P2E9 1401 aaKnown RBP20.94■□□□□ 0.94
CTSD-202ENST00000367196 CD163L1Q9NR16 1453 aa20.94■□□□□ 0.94
CTSD-202ENST00000367196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.93■□□□□ 0.94
CTSD-202ENST00000367196 AXIN2Q9Y2T1 843 aa20.93■□□□□ 0.94
CTSD-202ENST00000367196 CARD10Q9BWT7 1032 aa20.92■□□□□ 0.94
CTSD-202ENST00000367196 CCDC7Q96M83 1385 aa20.92■□□□□ 0.94
CTSD-202ENST00000367196 PEAK1Q9H792 1746 aa20.92■□□□□ 0.94
CTSD-202ENST00000367196 R3HDM1Q15032 1099 aaKnown RBP20.91■□□□□ 0.94
CTSD-202ENST00000367196 RGPD3A6NKT7 1758 aaPredicted RBP20.9■□□□□ 0.94
CTSD-202ENST00000367196 RGPD4Q7Z3J3 1758 aa20.9■□□□□ 0.94
CTSD-202ENST00000367196 LTN1O94822 1766 aa20.9■□□□□ 0.94
CTSD-202ENST00000367196 NUP188Q5SRE5 1749 aa20.9■□□□□ 0.94
CTSD-202ENST00000367196 A0A1W2PP64 1363 aa20.89■□□□□ 0.93
CTSD-202ENST00000367196 NBPF14Q5TI25 921 aa20.89■□□□□ 0.93
CTSD-202ENST00000367196 SBF2Q86WG5 1849 aa20.88■□□□□ 0.93
CTSD-202ENST00000367196 NME9Q86XW9 330 aa20.88■□□□□ 0.93
CTSD-202ENST00000367196 BCL9O00512 1426 aa20.87■□□□□ 0.93
CTSD-202ENST00000367196 SLC12A5Q9H2X9 1139 aa20.87■□□□□ 0.93
CTSD-202ENST00000367196 ST20-MTHFSA0A0A6YYL1 179 aa20.85■□□□□ 0.93
CTSD-202ENST00000367196 ERBB3P21860 1342 aa20.84■□□□□ 0.93
CTSD-202ENST00000367196 EXOC5O00471 708 aa20.84■□□□□ 0.93
CTSD-202ENST00000367196 TESK2Q96S53 571 aa20.84■□□□□ 0.93
CTSD-202ENST00000367196 BCL11BQ9C0K0 894 aaPredicted RBP20.84■□□□□ 0.93
CTSD-202ENST00000367196 TNS2Q63HR2 1409 aa20.84■□□□□ 0.93
CTSD-202ENST00000367196 PLSCR1O15162 318 aa20.83■□□□□ 0.93
CTSD-202ENST00000367196 FAM208AQ9UK61 1670 aaKnown RBP20.82■□□□□ 0.92
CTSD-202ENST00000367196 MARCH10Q8NA82 808 aaPredicted RBP20.81■□□□□ 0.92
CTSD-202ENST00000367196 NLRP2Q9NX02 1062 aa20.81■□□□□ 0.92
CTSD-202ENST00000367196 TMF1P82094 1093 aa20.8■□□□□ 0.92
CTSD-202ENST00000367196 ANKRD36BQ8N2N9 1353 aa20.8■□□□□ 0.92
CTSD-202ENST00000367196 USP47Q96K76 1375 aa20.8■□□□□ 0.92
CTSD-202ENST00000367196 COG3Q96JB2 828 aa20.79■□□□□ 0.92
CTSD-202ENST00000367196 CDCA8Q53HL2 280 aa20.78■□□□□ 0.92
CTSD-202ENST00000367196 ANKRD24Q8TF21 1146 aa20.78■□□□□ 0.92
CTSD-202ENST00000367196 IL2RBP14784 551 aa20.77■□□□□ 0.92
CTSD-202ENST00000367196 TIMELESSQ9UNS1 1208 aa20.77■□□□□ 0.92
CTSD-202ENST00000367196 NHSQ6T4R5 1651 aa20.75■□□□□ 0.91
CTSD-202ENST00000367196 IP6K1Q92551 441 aa20.75■□□□□ 0.91
CTSD-202ENST00000367196 CLSPNQ9HAW4 1339 aa20.75■□□□□ 0.91
CTSD-202ENST00000367196 RTL1A6NKG5 1358 aa20.72■□□□□ 0.91
CTSD-202ENST00000367196 SPON1Q9HCB6 807 aa20.71■□□□□ 0.91
CTSD-202ENST00000367196 AMPHP49418 695 aa20.7■□□□□ 0.9
CTSD-202ENST00000367196 KIF20BQ96Q89 1820 aa20.69■□□□□ 0.9
CTSD-202ENST00000367196 MAP3K19Q56UN5 1328 aa20.69■□□□□ 0.9
CTSD-202ENST00000367196 HOXC9P31274 260 aa20.68■□□□□ 0.9
CTSD-202ENST00000367196 PTF1AQ7RTS3 328 aa20.68■□□□□ 0.9
CTSD-202ENST00000367196 PPP1R1BQ9UD71 204 aaPredicted RBP20.68■□□□□ 0.9
CTSD-202ENST00000367196 SMG6Q86US8 1419 aaKnown RBP20.68■□□□□ 0.9
CTSD-202ENST00000367196 KCNQ2O43526 872 aa20.67■□□□□ 0.9
CTSD-202ENST00000367196 TXNRD1Q16881 649 aa20.67■□□□□ 0.9
CTSD-202ENST00000367196 LTV1Q96GA3 475 aaPredicted RBP20.67■□□□□ 0.9
CTSD-202ENST00000367196 STK32BQ9NY57 414 aa20.66■□□□□ 0.9
CTSD-202ENST00000367196 KAT6BQ8WYB5 2073 aa20.65■□□□□ 0.9
CTSD-202ENST00000367196 CASZ1Q86V15 1759 aa20.65■□□□□ 0.9
CTSD-202ENST00000367196 ANO8Q9HCE9 1232 aaPredicted RBP20.65■□□□□ 0.9
CTSD-202ENST00000367196 BTAF1O14981 1849 aa20.64■□□□□ 0.9
CTSD-202ENST00000367196 FYB1O15117 783 aa20.64■□□□□ 0.89
CTSD-202ENST00000367196 PROM2Q8N271 834 aa20.64■□□□□ 0.89
CTSD-202ENST00000367196 ACSBG1Q96GR2 724 aa20.64■□□□□ 0.89
CTSD-202ENST00000367196 KIF24Q5T7B8 1368 aa20.63■□□□□ 0.89
CTSD-202ENST00000367196 GGNBP2Q9H3C7 697 aa20.63■□□□□ 0.89
CTSD-202ENST00000367196 MYOM1P52179 1685 aa20.63■□□□□ 0.89
CTSD-202ENST00000367196 CGNL1Q0VF96 1302 aa20.61■□□□□ 0.89
CTSD-202ENST00000367196 SLC15A2Q16348 729 aa20.61■□□□□ 0.89
CTSD-202ENST00000367196 PCGF6Q9BYE7 350 aa20.61■□□□□ 0.89
CTSD-202ENST00000367196 RGPD2P0DJD1 1756 aa20.6■□□□□ 0.89
CTSD-202ENST00000367196 RRS1Q15050 365 aaKnown RBP20.6■□□□□ 0.89
CTSD-202ENST00000367196 DDX54Q8TDD1 881 aaKnown RBP20.6■□□□□ 0.89
CTSD-202ENST00000367196 FLT4P35916 1363 aa20.59■□□□□ 0.89
CTSD-202ENST00000367196 DCAF8L1A6NGE4 600 aa20.59■□□□□ 0.89
CTSD-202ENST00000367196 PAPPAQ13219 1627 aa20.58■□□□□ 0.89
CTSD-202ENST00000367196 NSD3Q9BZ95 1437 aa20.58■□□□□ 0.88
CTSD-202ENST00000367196 INSRP06213 1382 aa20.58■□□□□ 0.88
CTSD-202ENST00000367196 FBLN1P23142 703 aa20.57■□□□□ 0.88
CTSD-202ENST00000367196 ZCRB1Q8TBF4 217 aaKnown RBP20.57■□□□□ 0.88
CTSD-202ENST00000367196 DOT1LQ8TEK3 1739 aa20.57■□□□□ 0.88
CTSD-202ENST00000367196 RAPGEF4Q8WZA2 1011 aa20.57■□□□□ 0.88
CTSD-202ENST00000367196 MEGF6O75095 1541 aa20.57■□□□□ 0.88
CTSD-202ENST00000367196 SHANK3Q9BYB0 1731 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms