RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
PRKN-205ENST00000366897 BMP2KLQ5H9B9 411 aa16.93■□□□□ 0.3
PRKN-205ENST00000366897 A2ML1A8K2U0 1454 aa16.92■□□□□ 0.3
PRKN-205ENST00000366897 PPIP5K1Q6PFW1 1433 aa16.92■□□□□ 0.3
PRKN-205ENST00000366897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.92■□□□□ 0.3
PRKN-205ENST00000366897 VSIG10Q8N0Z9 540 aa16.92■□□□□ 0.3
PRKN-205ENST00000366897 ZNF142P52746 1687 aaPredicted RBP16.92■□□□□ 0.3
PRKN-205ENST00000366897 SIRT2Q8IXJ6 389 aa16.92■□□□□ 0.3
PRKN-205ENST00000366897 ABCC11Q96J66 1382 aa16.92■□□□□ 0.3
PRKN-205ENST00000366897 SPATA31D1Q6ZQQ2 1576 aa16.92■□□□□ 0.3
PRKN-205ENST00000366897 K7ELQ4 463 aaPredicted RBP16.91■□□□□ 0.3
PRKN-205ENST00000366897 ZBTB7BO15156 539 aaPredicted RBP16.91■□□□□ 0.3
PRKN-205ENST00000366897 PHACTR3Q96KR7 559 aa16.91■□□□□ 0.3
PRKN-205ENST00000366897 LMTK2Q8IWU2 1503 aa16.91■□□□□ 0.3
PRKN-205ENST00000366897 SETBP1Q9Y6X0 1596 aa16.91■□□□□ 0.3
PRKN-205ENST00000366897 NCLP19338 710 aaKnown RBP16.91■□□□□ 0.3
PRKN-205ENST00000366897 NCKAP5LQ9HCH0 1330 aa16.9■□□□□ 0.3
PRKN-205ENST00000366897 DDX49Q9Y6V7 483 aaKnown RBP16.9■□□□□ 0.3
PRKN-205ENST00000366897 NSD2O96028 1365 aa16.89■□□□□ 0.29
PRKN-205ENST00000366897 APBB1O00213 710 aa16.89■□□□□ 0.29
PRKN-205ENST00000366897 CHAMP1Q96JM3 812 aa16.89■□□□□ 0.29
PRKN-205ENST00000366897 NEURL4Q96JN8 1562 aa16.89■□□□□ 0.29
PRKN-205ENST00000366897 AK9Q5TCS8 1911 aa16.88■□□□□ 0.29
PRKN-205ENST00000366897 PKP1Q13835 747 aa16.88■□□□□ 0.29
PRKN-205ENST00000366897 CIZ1Q9ULV3 898 aaPredicted RBP16.88■□□□□ 0.29
PRKN-205ENST00000366897 C16orf71Q8IYS4 520 aaPredicted RBP16.88■□□□□ 0.29
PRKN-205ENST00000366897 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
PRKN-205ENST00000366897 IL16Q14005 1332 aa16.87■□□□□ 0.29
PRKN-205ENST00000366897 COL3A1P02461 1466 aaPredicted RBP16.87■□□□□ 0.29
PRKN-205ENST00000366897 NASPP49321 788 aaPredicted RBP16.87■□□□□ 0.29
PRKN-205ENST00000366897 THEMISQ8N1K5 641 aaPredicted RBP16.87■□□□□ 0.29
PRKN-205ENST00000366897 VGFO15240 615 aaPredicted RBP16.87■□□□□ 0.29
PRKN-205ENST00000366897 VAMP4O75379 141 aa16.87■□□□□ 0.29
PRKN-205ENST00000366897 GSPT1P15170 499 aaKnown RBP16.87■□□□□ 0.29
PRKN-205ENST00000366897 BAG4O95429 457 aaKnown RBP16.86■□□□□ 0.29
PRKN-205ENST00000366897 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
PRKN-205ENST00000366897 MCTP1Q6DN14 999 aa16.86■□□□□ 0.29
PRKN-205ENST00000366897 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
PRKN-205ENST00000366897 ALDH1L2Q3SY69 923 aa16.86■□□□□ 0.29
PRKN-205ENST00000366897 MRPL50Q8N5N7 158 aaKnown RBP16.86■□□□□ 0.29
PRKN-205ENST00000366897 OTUD7AQ8TE49 926 aaPredicted RBP16.86■□□□□ 0.29
PRKN-205ENST00000366897 USP32Q8NFA0 1604 aa16.86■□□□□ 0.29
PRKN-205ENST00000366897 PPLO60437 1756 aa16.85■□□□□ 0.29
PRKN-205ENST00000366897 IDI1Q13907 227 aa16.85■□□□□ 0.29
PRKN-205ENST00000366897 TERF2IPQ9NYB0 399 aa16.85■□□□□ 0.29
PRKN-205ENST00000366897 SKOR2Q2VWA4 1001 aaPredicted RBP16.84■□□□□ 0.29
PRKN-205ENST00000366897 CAVIN1Q6NZI2 390 aaKnown RBP16.84■□□□□ 0.29
PRKN-205ENST00000366897 DCTN1Q14203 1278 aa16.84■□□□□ 0.29
PRKN-205ENST00000366897 FOXD4L5Q5VV16 416 aaPredicted RBP16.84■□□□□ 0.29
PRKN-205ENST00000366897 FOXD4L4Q8WXT5 416 aaPredicted RBP16.84■□□□□ 0.29
PRKN-205ENST00000366897 GCC1Q96CN9 775 aa16.84■□□□□ 0.29
PRKN-205ENST00000366897 FAM83GA6ND36 823 aa16.83■□□□□ 0.29
PRKN-205ENST00000366897 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.29
PRKN-205ENST00000366897 C8orf58Q8NAV2 365 aa16.83■□□□□ 0.28
PRKN-205ENST00000366897 MBIPQ9NS73 344 aa16.83■□□□□ 0.28
PRKN-205ENST00000366897 GOLGA6L22H0YM25 854 aa16.83■□□□□ 0.28
PRKN-205ENST00000366897 CDC45O75419 566 aa16.83■□□□□ 0.28
PRKN-205ENST00000366897 RPGRIP1LQ68CZ1 1315 aa16.82■□□□□ 0.28
PRKN-205ENST00000366897 KIAA1211Q6ZU35 1233 aa16.82■□□□□ 0.28
PRKN-205ENST00000366897 EMILIN1Q9Y6C2 1016 aa16.82■□□□□ 0.28
PRKN-205ENST00000366897 GLIPR1L2Q4G1C9 344 aa16.82■□□□□ 0.28
PRKN-205ENST00000366897 ZMYND15Q9H091 742 aa16.82■□□□□ 0.28
PRKN-205ENST00000366897 RRP9O43818 475 aaKnown RBP16.81■□□□□ 0.28
PRKN-205ENST00000366897 FCHSD2O94868 740 aa16.81■□□□□ 0.28
PRKN-205ENST00000366897 ANKLE2Q86XL3 938 aa16.81■□□□□ 0.28
PRKN-205ENST00000366897 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
PRKN-205ENST00000366897 POLKQ9UBT6 870 aa16.81■□□□□ 0.28
PRKN-205ENST00000366897 SMARCA5O60264 1052 aaPredicted RBP16.81■□□□□ 0.28
PRKN-205ENST00000366897 PLEKHM2Q8IWE5 1019 aa16.81■□□□□ 0.28
PRKN-205ENST00000366897 ZGPATQ8N5A5 531 aaKnown RBP16.81■□□□□ 0.28
PRKN-205ENST00000366897 ARHGEF28Q8N1W1 1705 aaKnown RBP16.81■□□□□ 0.28
PRKN-205ENST00000366897 KRT24Q2M2I5 525 aa16.8■□□□□ 0.28
PRKN-205ENST00000366897 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
PRKN-205ENST00000366897 CDK19Q9BWU1 502 aa16.8■□□□□ 0.28
PRKN-205ENST00000366897 ZRANB1Q9UGI0 708 aa16.8■□□□□ 0.28
PRKN-205ENST00000366897 LRRC7Q96NW7 1537 aa16.8■□□□□ 0.28
PRKN-205ENST00000366897 HDGFL2Q7Z4V5 671 aaPredicted RBP16.8■□□□□ 0.28
PRKN-205ENST00000366897 NFE2L2Q16236 605 aa16.79■□□□□ 0.28
PRKN-205ENST00000366897 KLHL40Q2TBA0 621 aa16.79■□□□□ 0.28
PRKN-205ENST00000366897 STAG3Q9UJ98 1225 aa16.79■□□□□ 0.28
PRKN-205ENST00000366897 PUS7Q96PZ0 661 aaKnown RBP16.79■□□□□ 0.28
PRKN-205ENST00000366897 CCDC173Q0VFZ6 552 aa16.79■□□□□ 0.28
PRKN-205ENST00000366897 PKNOX2Q96KN3 472 aa16.79■□□□□ 0.28
PRKN-205ENST00000366897 MED14O60244 1454 aa16.78■□□□□ 0.28
PRKN-205ENST00000366897 RBM10P98175 930 aaKnown RBP16.78■□□□□ 0.28
PRKN-205ENST00000366897 SLC52A1Q9NWF4 448 aa16.78■□□□□ 0.28
PRKN-205ENST00000366897 UBR1Q8IWV7 1749 aa16.78■□□□□ 0.28
PRKN-205ENST00000366897 CD163L1Q9NR16 1453 aa16.78■□□□□ 0.28
PRKN-205ENST00000366897 ANP32BQ92688 251 aaKnown RBP16.78■□□□□ 0.28
PRKN-205ENST00000366897 PRPF40AO75400 957 aaKnown RBP16.77■□□□□ 0.28
PRKN-205ENST00000366897 PIK3C2BO00750 1634 aa16.77■□□□□ 0.27
PRKN-205ENST00000366897 ZSCAN23Q3MJ62 389 aa16.77■□□□□ 0.27
PRKN-205ENST00000366897 ZSCAN30Q86W11 494 aa16.77■□□□□ 0.27
PRKN-205ENST00000366897 RBSNQ9H1K0 784 aa16.77■□□□□ 0.27
PRKN-205ENST00000366897 CALD1Q05682 793 aaKnown RBP16.76■□□□□ 0.27
PRKN-205ENST00000366897 ABCC4O15439 1325 aa16.76■□□□□ 0.27
PRKN-205ENST00000366897 ZBTB7CA1YPR0 619 aa16.76■□□□□ 0.27
PRKN-205ENST00000366897 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
PRKN-205ENST00000366897 PPP1R9BQ96SB3 815 aa16.76■□□□□ 0.27
PRKN-205ENST00000366897 MSNP26038 577 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms