RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 RTEL1-TNFRSF6BF6WH68 1400 aa14.12□□□□□ -0.15
CDC42BPA-202ENST00000366764 TPD52L1Q16890 204 aaPredicted RBP14.12□□□□□ -0.15
CDC42BPA-202ENST00000366764 CCDC66A2RUB6 948 aa14.11□□□□□ -0.15
CDC42BPA-202ENST00000366764 ZNF396Q96N95 335 aaPredicted RBP14.11□□□□□ -0.15
CDC42BPA-202ENST00000366764 TBC1D2Q9BYX2 928 aa14.11□□□□□ -0.15
CDC42BPA-202ENST00000366764 ANKRD36BQ8N2N9 1353 aa14.11□□□□□ -0.15
CDC42BPA-202ENST00000366764 TMEM57Q8N5G2 664 aa14.11□□□□□ -0.15
CDC42BPA-202ENST00000366764 SSH1Q8WYL5 1049 aa14.11□□□□□ -0.15
CDC42BPA-202ENST00000366764 KRT85P78386 507 aa14.11□□□□□ -0.15
CDC42BPA-202ENST00000366764 SAFBQ15424 915 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDC42BPA-202ENST00000366764 TRIM5Q9C035 493 aa14.11□□□□□ -0.15
CDC42BPA-202ENST00000366764 POLR3AO14802 1390 aaPredicted RBP14.11□□□□□ -0.15
CDC42BPA-202ENST00000366764 CYP46A1Q9Y6A2 500 aa14.11□□□□□ -0.15
CDC42BPA-202ENST00000366764 SYCP2Q9BX26 1530 aa14.1□□□□□ -0.15
CDC42BPA-202ENST00000366764 A0A0U1RQG5 324 aaPredicted RBP14.1□□□□□ -0.15
CDC42BPA-202ENST00000366764 ZMYM3Q14202 1370 aa14.1□□□□□ -0.15
CDC42BPA-202ENST00000366764 PZPP20742 1482 aa14.1□□□□□ -0.15
CDC42BPA-202ENST00000366764 KIF1BO60333 1816 aa14.1□□□□□ -0.15
CDC42BPA-202ENST00000366764 MYO5CQ9NQX4 1742 aa14.1□□□□□ -0.15
CDC42BPA-202ENST00000366764 ZNF592Q92610 1267 aa14.1□□□□□ -0.15
CDC42BPA-202ENST00000366764 KDM5BQ9UGL1 1544 aa14.1□□□□□ -0.15
CDC42BPA-202ENST00000366764 EIF2S2P20042 333 aaKnown RBP14.1□□□□□ -0.15
CDC42BPA-202ENST00000366764 PUS7Q96PZ0 661 aaKnown RBP14.1□□□□□ -0.15
CDC42BPA-202ENST00000366764 CDK19Q9BWU1 502 aa14.1□□□□□ -0.15
CDC42BPA-202ENST00000366764 JMYQ8N9B5 988 aa14.1□□□□□ -0.15
CDC42BPA-202ENST00000366764 BLMP54132 1417 aaPredicted RBP14.09□□□□□ -0.15
CDC42BPA-202ENST00000366764 KIF2AO00139 706 aaPredicted RBP14.09□□□□□ -0.15
CDC42BPA-202ENST00000366764 SURF6O75683 361 aaKnown RBP14.09□□□□□ -0.15
CDC42BPA-202ENST00000366764 RALYLQ86SE5 291 aaKnown RBP14.09□□□□□ -0.15
CDC42BPA-202ENST00000366764 RNF214Q8ND24 703 aa14.09□□□□□ -0.15
CDC42BPA-202ENST00000366764 ARHGAP45Q92619 1136 aa14.09□□□□□ -0.15
CDC42BPA-202ENST00000366764 MNS1Q8NEH6 495 aa14.09□□□□□ -0.15
CDC42BPA-202ENST00000366764 SETQ01105 290 aaPredicted RBP14.08□□□□□ -0.15
CDC42BPA-202ENST00000366764 SDF4Q9BRK5 362 aa14.08□□□□□ -0.15
CDC42BPA-202ENST00000366764 AMER1Q5JTC6 1135 aaPredicted RBP14.08□□□□□ -0.16
CDC42BPA-202ENST00000366764 PDCL2Q8N4E4 241 aa14.08□□□□□ -0.16
CDC42BPA-202ENST00000366764 KRT32Q14532 448 aa14.08□□□□□ -0.16
CDC42BPA-202ENST00000366764 CAVIN2O95810 425 aa14.08□□□□□ -0.16
CDC42BPA-202ENST00000366764 CWC15Q9P013 229 aaKnown RBP14.08□□□□□ -0.16
CDC42BPA-202ENST00000366764 OLFM4Q6UX06 510 aa14.07□□□□□ -0.16
CDC42BPA-202ENST00000366764 SLC4A2P04920 1241 aa14.07□□□□□ -0.16
CDC42BPA-202ENST00000366764 TAF3Q5VWG9 929 aa14.07□□□□□ -0.16
CDC42BPA-202ENST00000366764 PTPRCP08575 1304 aa14.07□□□□□ -0.16
CDC42BPA-202ENST00000366764 NOM1Q5C9Z4 860 aaKnown RBP14.07□□□□□ -0.16
CDC42BPA-202ENST00000366764 ARHGEF5Q12774 1597 aa14.07□□□□□ -0.16
CDC42BPA-202ENST00000366764 FSD1Q9BTV5 496 aa14.07□□□□□ -0.16
CDC42BPA-202ENST00000366764 TRIM27P14373 513 aa14.07□□□□□ -0.16
CDC42BPA-202ENST00000366764 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
CDC42BPA-202ENST00000366764 SH2B1Q9NRF2 756 aaPredicted RBP14.06□□□□□ -0.16
CDC42BPA-202ENST00000366764 CFAP45Q9UL16 551 aa14.06□□□□□ -0.16
CDC42BPA-202ENST00000366764 RAB11FIP3O75154 756 aa14.06□□□□□ -0.16
CDC42BPA-202ENST00000366764 CCDC47Q96A33 483 aaKnown RBP14.06□□□□□ -0.16
CDC42BPA-202ENST00000366764 FIBPO43427 364 aa14.06□□□□□ -0.16
CDC42BPA-202ENST00000366764 CABP1Q9NZU7 370 aa14.06□□□□□ -0.16
CDC42BPA-202ENST00000366764 C1orf115Q9H7X2 142 aa14.06□□□□□ -0.16
CDC42BPA-202ENST00000366764 HSP90B2PQ58FF3 399 aa14.05□□□□□ -0.16
CDC42BPA-202ENST00000366764 ZNF330Q9Y3S2 320 aaPredicted RBP14.05□□□□□ -0.16
CDC42BPA-202ENST00000366764 SNX21Q969T3 373 aa14.05□□□□□ -0.16
CDC42BPA-202ENST00000366764 KLHL40Q2TBA0 621 aa14.05□□□□□ -0.16
CDC42BPA-202ENST00000366764 KDM5CP41229 1560 aa14.05□□□□□ -0.16
CDC42BPA-202ENST00000366764 NUTM2FA1L443 756 aa14.05□□□□□ -0.16
CDC42BPA-202ENST00000366764 TOMM22Q9NS69 142 aa14.05□□□□□ -0.16
CDC42BPA-202ENST00000366764 FANCAO15360 1455 aa14.04□□□□□ -0.16
CDC42BPA-202ENST00000366764 ATP10BO94823 1461 aa14.04□□□□□ -0.16
CDC42BPA-202ENST00000366764 HDGFL1Q5TGJ6 251 aa14.04□□□□□ -0.16
CDC42BPA-202ENST00000366764 PSME1Q06323 249 aa14.04□□□□□ -0.16
CDC42BPA-202ENST00000366764 HS1BP3Q53T59 392 aa14.04□□□□□ -0.16
CDC42BPA-202ENST00000366764 TNMDQ9H2S6 317 aa14.04□□□□□ -0.16
CDC42BPA-202ENST00000366764 CCAR2Q8N163 923 aaKnown RBP14.04□□□□□ -0.16
CDC42BPA-202ENST00000366764 TNPO1Q92973 898 aaKnown RBP14.04□□□□□ -0.16
CDC42BPA-202ENST00000366764 ANO8Q9HCE9 1232 aaPredicted RBP14.04□□□□□ -0.16
CDC42BPA-202ENST00000366764 PIP4K2AP48426 406 aaPredicted RBP14.04□□□□□ -0.16
CDC42BPA-202ENST00000366764 CCDC61Q9Y6R9 512 aa14.04□□□□□ -0.16
CDC42BPA-202ENST00000366764 CCDC183Q5T5S1 534 aa14.03□□□□□ -0.16
CDC42BPA-202ENST00000366764 SPATA31E1Q6ZUB1 1445 aa14.03□□□□□ -0.16
CDC42BPA-202ENST00000366764 PLEKHO1Q53GL0 409 aaPredicted RBP14.03□□□□□ -0.16
CDC42BPA-202ENST00000366764 SULT6B1Q6IMI4 303 aa14.03□□□□□ -0.16
CDC42BPA-202ENST00000366764 UQCRHLA0A096LP55 91 aa14.03□□□□□ -0.16
CDC42BPA-202ENST00000366764 UQCRHP07919 91 aa14.03□□□□□ -0.16
CDC42BPA-202ENST00000366764 XBP1P17861 261 aa14.03□□□□□ -0.16
CDC42BPA-202ENST00000366764 CCDC112Q8NEF3 446 aa14.02□□□□□ -0.16
CDC42BPA-202ENST00000366764 ERCC4Q92889 916 aaPredicted RBP14.02□□□□□ -0.16
CDC42BPA-202ENST00000366764 SCAND2PQ9GZW5 306 aaPredicted RBP14.02□□□□□ -0.16
CDC42BPA-202ENST00000366764 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
CDC42BPA-202ENST00000366764 PLXNC1O60486 1568 aa14.02□□□□□ -0.17
CDC42BPA-202ENST00000366764 CLCN1P35523 988 aa14.02□□□□□ -0.17
CDC42BPA-202ENST00000366764 NLRP6P59044 892 aa14.02□□□□□ -0.17
CDC42BPA-202ENST00000366764 NUCB1Q02818 461 aa14.02□□□□□ -0.17
CDC42BPA-202ENST00000366764 PDCL3Q9H2J4 239 aa14.02□□□□□ -0.17
CDC42BPA-202ENST00000366764 ERICH2A1L162 156 aa14.02□□□□□ -0.17
CDC42BPA-202ENST00000366764 RIC3Q7Z5B4 369 aa14.02□□□□□ -0.17
CDC42BPA-202ENST00000366764 ZFYVE9O95405 1425 aa14.02□□□□□ -0.17
CDC42BPA-202ENST00000366764 TTC21BQ7Z4L5 1316 aa14.02□□□□□ -0.17
CDC42BPA-202ENST00000366764 MX1P20591 662 aa14.01□□□□□ -0.17
CDC42BPA-202ENST00000366764 RAPGEF4Q8WZA2 1011 aa14.01□□□□□ -0.17
CDC42BPA-202ENST00000366764 SART3Q15020 963 aaKnown RBP14.01□□□□□ -0.17
CDC42BPA-202ENST00000366764 BRMS1Q9HCU9 246 aa14.01□□□□□ -0.17
CDC42BPA-202ENST00000366764 C8orf34Q49A92 452 aa14.01□□□□□ -0.17
CDC42BPA-202ENST00000366764 CEP57L1Q8IYX8 460 aa14.01□□□□□ -0.17
CDC42BPA-202ENST00000366764 TESK2Q96S53 571 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms