RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 A6NJR5 290 aa6.77□□□□□ -1.33
RNU4-48P-201ENST00000365559 POM121CA8CG34 1229 aa6.77□□□□□ -1.33
RNU4-48P-201ENST00000365559 AVPP01185 164 aa6.77□□□□□ -1.33
RNU4-48P-201ENST00000365559 MYT1Q01538 1121 aa6.77□□□□□ -1.33
RNU4-48P-201ENST00000365559 NR5A1Q13285 461 aa6.77□□□□□ -1.33
RNU4-48P-201ENST00000365559 CDV3Q9UKY7 258 aaKnown RBP6.77□□□□□ -1.33
RNU4-48P-201ENST00000365559 ZNF330Q9Y3S2 320 aaPredicted RBP6.77□□□□□ -1.33
RNU4-48P-201ENST00000365559 ESPNB1AK53 854 aa6.76□□□□□ -1.33
RNU4-48P-201ENST00000365559 GIGYF1O75420 1035 aaPredicted RBP6.76□□□□□ -1.33
RNU4-48P-201ENST00000365559 RAB15P59190 212 aa6.76□□□□□ -1.33
RNU4-48P-201ENST00000365559 EIF4G2P78344 907 aaKnown RBP eCLIP6.76□□□□□ -1.33
RNU4-48P-201ENST00000365559 NBPF20Q3BBV1 942 aa6.76□□□□□ -1.33
RNU4-48P-201ENST00000365559 INTS6LQ5JSJ4 861 aaKnown RBP6.76□□□□□ -1.33
RNU4-48P-201ENST00000365559 WWC1Q8IX03 1113 aa6.76□□□□□ -1.33
RNU4-48P-201ENST00000365559 ST8SIA5O15466 376 aa6.75□□□□□ -1.33
RNU4-48P-201ENST00000365559 KLF16Q9BXK1 252 aaPredicted RBP6.75□□□□□ -1.33
RNU4-48P-201ENST00000365559 CEP126Q9P2H0 1117 aa6.75□□□□□ -1.33
RNU4-48P-201ENST00000365559 MCCD1P59942 119 aaPredicted RBP6.74□□□□□ -1.33
RNU4-48P-201ENST00000365559 CCDC116Q8IYX3 515 aa6.74□□□□□ -1.33
RNU4-48P-201ENST00000365559 ADAMTS19Q8TE59 1207 aa6.74□□□□□ -1.33
RNU4-48P-201ENST00000365559 AAASQ9NRG9 546 aa6.74□□□□□ -1.33
RNU4-48P-201ENST00000365559 ERVH48-1M5A8F1 160 aa6.73□□□□□ -1.33
RNU4-48P-201ENST00000365559 TIMP2P16035 220 aa6.73□□□□□ -1.33
RNU4-48P-201ENST00000365559 WDR4P57081 412 aaKnown RBP6.73□□□□□ -1.33
RNU4-48P-201ENST00000365559 SEMA3FQ13275 785 aa6.73□□□□□ -1.33
RNU4-48P-201ENST00000365559 PPP1R26Q5T8A7 1209 aaPredicted RBP6.73□□□□□ -1.33
RNU4-48P-201ENST00000365559 TRAF7Q6Q0C0 670 aa6.73□□□□□ -1.33
RNU4-48P-201ENST00000365559 ITPKCQ96DU7 683 aa6.73□□□□□ -1.33
RNU4-48P-201ENST00000365559 ALG2Q9H553 416 aa6.73□□□□□ -1.33
RNU4-48P-201ENST00000365559 ZFAND3Q9H8U3 227 aa6.73□□□□□ -1.33
RNU4-48P-201ENST00000365559 TRAK2O60296 914 aa6.72□□□□□ -1.33
RNU4-48P-201ENST00000365559 ZIC2O95409 532 aaPredicted RBP6.72□□□□□ -1.33
RNU4-48P-201ENST00000365559 SMCPP49901 116 aaPredicted RBP6.72□□□□□ -1.33
RNU4-48P-201ENST00000365559 CTC1Q2NKJ3 1217 aa6.72□□□□□ -1.33
RNU4-48P-201ENST00000365559 CRIPAKQ8N1N5 446 aa6.72□□□□□ -1.33
RNU4-48P-201ENST00000365559 ZNF592Q92610 1267 aa6.72□□□□□ -1.33
RNU4-48P-201ENST00000365559 ZMYND15Q9H091 742 aa6.72□□□□□ -1.33
RNU4-48P-201ENST00000365559 TMPRSS4Q9NRS4 437 aa6.72□□□□□ -1.33
RNU4-48P-201ENST00000365559 AXIN1O15169 862 aa6.71□□□□□ -1.34
RNU4-48P-201ENST00000365559 CAPN5O15484 640 aaPredicted RBP6.71□□□□□ -1.34
RNU4-48P-201ENST00000365559 SOX11P35716 441 aa6.71□□□□□ -1.34
RNU4-48P-201ENST00000365559 DHX9Q08211 1270 aaKnown RBP6.71□□□□□ -1.34
RNU4-48P-201ENST00000365559 C14orf37Q86TY3 774 aa6.71□□□□□ -1.34
RNU4-48P-201ENST00000365559 SEPT12Q8IYM1 358 aa6.71□□□□□ -1.34
RNU4-48P-201ENST00000365559 PHTF2Q8N3S3 785 aa6.71□□□□□ -1.34
RNU4-48P-201ENST00000365559 DACH1Q9UI36 760 aa6.71□□□□□ -1.34
RNU4-48P-201ENST00000365559 EMILIN1Q9Y6C2 1016 aa6.71□□□□□ -1.34
RNU4-48P-201ENST00000365559 TSGA10IPQ3SY00 556 aa6.7□□□□□ -1.34
RNU4-48P-201ENST00000365559 HDGFL1Q5TGJ6 251 aa6.7□□□□□ -1.34
RNU4-48P-201ENST00000365559 ZNF784Q8NCA9 323 aaPredicted RBP6.7□□□□□ -1.34
RNU4-48P-201ENST00000365559 CCDC85AQ96PX6 553 aaPredicted RBP6.7□□□□□ -1.34
RNU4-48P-201ENST00000365559 PIK3CDO00329 1044 aa6.69□□□□□ -1.34
RNU4-48P-201ENST00000365559 BMP1P13497 986 aa6.69□□□□□ -1.34
RNU4-48P-201ENST00000365559 SLFNL1Q499Z3 407 aa6.69□□□□□ -1.34
RNU4-48P-201ENST00000365559 RNF20Q5VTR2 975 aa6.69□□□□□ -1.34
RNU4-48P-201ENST00000365559 PGPEP1Q9NXJ5 209 aa6.69□□□□□ -1.34
RNU4-48P-201ENST00000365559 ZNF777Q9ULD5 760 aaPredicted RBP6.69□□□□□ -1.34
RNU4-48P-201ENST00000365559 PCDHB11Q9Y5F2 797 aa6.69□□□□□ -1.34
RNU4-48P-201ENST00000365559 LILRA1O75019 489 aa6.68□□□□□ -1.34
RNU4-48P-201ENST00000365559 CBLBQ13191 982 aa6.68□□□□□ -1.34
RNU4-48P-201ENST00000365559 RNF135Q8IUD6 432 aa6.68□□□□□ -1.34
RNU4-48P-201ENST00000365559 GLMNQ92990 594 aa6.68□□□□□ -1.34
RNU4-48P-201ENST00000365559 CDCA7Q9BWT1 371 aaPredicted RBP6.68□□□□□ -1.34
RNU4-48P-201ENST00000365559 CYLDQ9NQC7 956 aa6.68□□□□□ -1.34
RNU4-48P-201ENST00000365559 ADD1P35611 737 aaKnown RBP6.67□□□□□ -1.34
RNU4-48P-201ENST00000365559 SCTRP47872 440 aa6.67□□□□□ -1.34
RNU4-48P-201ENST00000365559 TRIM46Q7Z4K8 759 aa6.67□□□□□ -1.34
RNU4-48P-201ENST00000365559 Q6ZVU0 165 aa6.66□□□□□ -1.34
RNU4-48P-201ENST00000365559 MEIOBQ8N635 442 aa6.66□□□□□ -1.34
RNU4-48P-201ENST00000365559 UCN2Q96RP3 112 aa6.66□□□□□ -1.34
RNU4-48P-201ENST00000365559 ATP13A2Q9NQ11 1180 aa6.66□□□□□ -1.34
RNU4-48P-201ENST00000365559 CHIC2Q9UKJ5 165 aa6.66□□□□□ -1.34
RNU4-48P-201ENST00000365559 ERVK-9P63128 1117 aa6.65□□□□□ -1.34
RNU4-48P-201ENST00000365559 MRPL14Q6P1L8 145 aaKnown RBP6.65□□□□□ -1.34
RNU4-48P-201ENST00000365559 CCDC125Q86Z20 511 aa6.65□□□□□ -1.34
RNU4-48P-201ENST00000365559 CALR3Q96L12 384 aaKnown RBP6.65□□□□□ -1.34
RNU4-48P-201ENST00000365559 AGBL1Q96MI9 1066 aa6.65□□□□□ -1.34
RNU4-48P-201ENST00000365559 DOLKQ9UPQ8 538 aa6.65□□□□□ -1.34
RNU4-48P-201ENST00000365559 POTECB2RU33 542 aa6.64□□□□□ -1.35
RNU4-48P-201ENST00000365559 SKIP12755 728 aa6.64□□□□□ -1.35
RNU4-48P-201ENST00000365559 KDF1Q8NAX2 398 aaPredicted RBP6.64□□□□□ -1.35
RNU4-48P-201ENST00000365559 PLPP7Q8NBV4 271 aa6.64□□□□□ -1.35
RNU4-48P-201ENST00000365559 TIMELESSQ9UNS1 1208 aa6.64□□□□□ -1.35
RNU4-48P-201ENST00000365559 ARID3CA6NKF2 412 aa6.63□□□□□ -1.35
RNU4-48P-201ENST00000365559 OXLD1Q5BKU9 147 aa6.63□□□□□ -1.35
RNU4-48P-201ENST00000365559 C6orf118Q5T5N4 469 aa6.63□□□□□ -1.35
RNU4-48P-201ENST00000365559 CC2D2BQ6DHV5 1058 aa6.63□□□□□ -1.35
RNU4-48P-201ENST00000365559 TBC1D9Q6ZT07 1266 aa6.63□□□□□ -1.35
RNU4-48P-201ENST00000365559 LINC00528Q8N1L1 170 aa6.63□□□□□ -1.35
RNU4-48P-201ENST00000365559 NFATC2IPQ8NCF5 419 aa6.63□□□□□ -1.35
RNU4-48P-201ENST00000365559 PURBQ96QR8 312 aaKnown RBP6.63□□□□□ -1.35
RNU4-48P-201ENST00000365559 GMPR2Q9P2T1 348 aaKnown RBP6.63□□□□□ -1.35
RNU4-48P-201ENST00000365559 ADH1AP07327 375 aa6.62□□□□□ -1.35
RNU4-48P-201ENST00000365559 RELBQ01201 579 aa6.62□□□□□ -1.35
RNU4-48P-201ENST00000365559 MAP7D1Q3KQU3 841 aa6.62□□□□□ -1.35
RNU4-48P-201ENST00000365559 ZFP42Q96MM3 310 aa6.62□□□□□ -1.35
RNU4-48P-201ENST00000365559 TSEN34Q9BSV6 310 aaKnown RBP6.62□□□□□ -1.35
RNU4-48P-201ENST00000365559 OSBPL3Q9H4L5 887 aa6.62□□□□□ -1.35
RNU4-48P-201ENST00000365559 BMP2P12643 396 aa6.61□□□□□ -1.35
RNU4-48P-201ENST00000365559 DEPDC4Q8N2C3 294 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms