RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 TNFRSF10AO00220 468 aa5.32□□□□□ -1.56
RNU6-428P-201ENST00000362942 ADH1CP00326 375 aa5.32□□□□□ -1.56
RNU6-428P-201ENST00000362942 CALR3Q96L12 384 aaKnown RBP5.32□□□□□ -1.56
RNU6-428P-201ENST00000362942 KCTD15Q96SI1 283 aaPredicted RBP5.32□□□□□ -1.56
RNU6-428P-201ENST00000362942 OCSTAMPQ9BR26 566 aa5.32□□□□□ -1.56
RNU6-428P-201ENST00000362942 NRG2O14511 850 aaPredicted RBP5.31□□□□□ -1.56
RNU6-428P-201ENST00000362942 GLMNQ92990 594 aa5.31□□□□□ -1.56
RNU6-428P-201ENST00000362942 ESF1Q9H501 851 aaKnown RBP5.31□□□□□ -1.56
RNU6-428P-201ENST00000362942 ALG2Q9H553 416 aa5.31□□□□□ -1.56
RNU6-428P-201ENST00000362942 TOR4AQ9NXH8 423 aa5.31□□□□□ -1.56
RNU6-428P-201ENST00000362942 PGPEP1Q9NXJ5 209 aa5.31□□□□□ -1.56
RNU6-428P-201ENST00000362942 TLL2Q9Y6L7 1015 aa5.31□□□□□ -1.56
RNU6-428P-201ENST00000362942 GFRA3O60609 400 aa5.3□□□□□ -1.56
RNU6-428P-201ENST00000362942 FSHRP23945 695 aa5.3□□□□□ -1.56
RNU6-428P-201ENST00000362942 HDGFL1Q5TGJ6 251 aa5.3□□□□□ -1.56
RNU6-428P-201ENST00000362942 SIRT1Q96EB6 747 aa5.3□□□□□ -1.56
RNU6-428P-201ENST00000362942 IRX2Q9BZI1 471 aaPredicted RBP5.3□□□□□ -1.56
RNU6-428P-201ENST00000362942 CEP126Q9P2H0 1117 aa5.3□□□□□ -1.56
RNU6-428P-201ENST00000362942 ZNF777Q9ULD5 760 aaPredicted RBP5.3□□□□□ -1.56
RNU6-428P-201ENST00000362942 EMILIN1Q9Y6C2 1016 aa5.3□□□□□ -1.56
RNU6-428P-201ENST00000362942 POM121CA8CG34 1229 aa5.29□□□□□ -1.56
RNU6-428P-201ENST00000362942 ESPNB1AK53 854 aa5.29□□□□□ -1.56
RNU6-428P-201ENST00000362942 LZTS3O60299 673 aaPredicted RBP5.29□□□□□ -1.56
RNU6-428P-201ENST00000362942 DGAT1O75907 488 aa5.29□□□□□ -1.56
RNU6-428P-201ENST00000362942 NNTQ13423 1086 aa5.29□□□□□ -1.56
RNU6-428P-201ENST00000362942 MAP7D1Q3KQU3 841 aa5.29□□□□□ -1.56
RNU6-428P-201ENST00000362942 PKDCCQ504Y2 493 aa5.29□□□□□ -1.56
RNU6-428P-201ENST00000362942 RNF135Q8IUD6 432 aa5.29□□□□□ -1.56
RNU6-428P-201ENST00000362942 CCDC116Q8IYX3 515 aa5.29□□□□□ -1.56
RNU6-428P-201ENST00000362942 NFATC2IPQ8NCF5 419 aa5.29□□□□□ -1.56
RNU6-428P-201ENST00000362942 CCDC97Q96F63 343 aaPredicted RBP5.29□□□□□ -1.56
RNU6-428P-201ENST00000362942 SERPINA10Q9UK55 444 aa5.29□□□□□ -1.56
RNU6-428P-201ENST00000362942 FAM187AA6NFU0 413 aa5.28□□□□□ -1.56
RNU6-428P-201ENST00000362942 GIGYF1O75420 1035 aaPredicted RBP5.28□□□□□ -1.56
RNU6-428P-201ENST00000362942 TRIM67Q6ZTA4 783 aa5.28□□□□□ -1.56
RNU6-428P-201ENST00000362942 J3QL48 77 aa5.27□□□□□ -1.57
RNU6-428P-201ENST00000362942 MYCP01106 439 aaPredicted RBP5.27□□□□□ -1.57
RNU6-428P-201ENST00000362942 GRM5P41594 1212 aa5.27□□□□□ -1.57
RNU6-428P-201ENST00000362942 RAB15P59190 212 aa5.27□□□□□ -1.57
RNU6-428P-201ENST00000362942 CTC1Q2NKJ3 1217 aa5.27□□□□□ -1.57
RNU6-428P-201ENST00000362942 INTS6LQ5JSJ4 861 aaKnown RBP5.27□□□□□ -1.57
RNU6-428P-201ENST00000362942 DOLKQ9UPQ8 538 aa5.27□□□□□ -1.57
RNU6-428P-201ENST00000362942 SKIP12755 728 aa5.26□□□□□ -1.57
RNU6-428P-201ENST00000362942 SMPD1P17405 629 aa5.26□□□□□ -1.57
RNU6-428P-201ENST00000362942 MYT1Q01538 1121 aa5.26□□□□□ -1.57
RNU6-428P-201ENST00000362942 USP4Q13107 963 aa5.26□□□□□ -1.57
RNU6-428P-201ENST00000362942 ATP9BO43861 1147 aa5.25□□□□□ -1.57
RNU6-428P-201ENST00000362942 UPP2O95045 317 aa5.25□□□□□ -1.57
RNU6-428P-201ENST00000362942 WDR4P57081 412 aaKnown RBP5.25□□□□□ -1.57
RNU6-428P-201ENST00000362942 EML3Q32P44 896 aa5.25□□□□□ -1.57
RNU6-428P-201ENST00000362942 PPP1R26Q5T8A7 1209 aaPredicted RBP5.25□□□□□ -1.57
RNU6-428P-201ENST00000362942 PLPP7Q8NBV4 271 aa5.25□□□□□ -1.57
RNU6-428P-201ENST00000362942 PCDHB11Q9Y5F2 797 aa5.25□□□□□ -1.57
RNU6-428P-201ENST00000362942 ERVH48-1M5A8F1 160 aa5.24□□□□□ -1.57
RNU6-428P-201ENST00000362942 AVPP01185 164 aa5.24□□□□□ -1.57
RNU6-428P-201ENST00000362942 CC2D2BQ6DHV5 1058 aa5.24□□□□□ -1.57
RNU6-428P-201ENST00000362942 TRIM50Q86XT4 487 aa5.24□□□□□ -1.57
RNU6-428P-201ENST00000362942 PHTF2Q8N3S3 785 aa5.24□□□□□ -1.57
RNU6-428P-201ENST00000362942 ADAMTS19Q8TE59 1207 aa5.24□□□□□ -1.57
RNU6-428P-201ENST00000362942 PPP1R12CQ9BZL4 782 aa5.24□□□□□ -1.57
RNU6-428P-201ENST00000362942 ARID3CA6NKF2 412 aa5.23□□□□□ -1.57
RNU6-428P-201ENST00000362942 USP17L5A8MUK1 530 aa5.23□□□□□ -1.57
RNU6-428P-201ENST00000362942 SUPT5HO00267 1087 aaKnown RBP5.23□□□□□ -1.57
RNU6-428P-201ENST00000362942 CAPN5O15484 640 aaPredicted RBP5.23□□□□□ -1.57
RNU6-428P-201ENST00000362942 ZIC2O95409 532 aaPredicted RBP5.23□□□□□ -1.57
RNU6-428P-201ENST00000362942 SMCPP49901 116 aaPredicted RBP5.23□□□□□ -1.57
RNU6-428P-201ENST00000362942 OXLD1Q5BKU9 147 aa5.23□□□□□ -1.57
RNU6-428P-201ENST00000362942 PLEKHM2Q8IWE5 1019 aa5.23□□□□□ -1.57
RNU6-428P-201ENST00000362942 HPS1Q92902 700 aa5.23□□□□□ -1.57
RNU6-428P-201ENST00000362942 NOD1Q9Y239 953 aa5.23□□□□□ -1.57
RNU6-428P-201ENST00000362942 PALM3A6NDB9 673 aaPredicted RBP5.22□□□□□ -1.57
RNU6-428P-201ENST00000362942 ATP5J2-PTCD1G3V325 749 aa5.22□□□□□ -1.57
RNU6-428P-201ENST00000362942 AXIN1O15169 862 aa5.22□□□□□ -1.57
RNU6-428P-201ENST00000362942 NR3C2P08235 984 aa5.22□□□□□ -1.57
RNU6-428P-201ENST00000362942 TIMP2P16035 220 aa5.22□□□□□ -1.57
RNU6-428P-201ENST00000362942 ATP1A2P50993 1020 aa5.22□□□□□ -1.57
RNU6-428P-201ENST00000362942 ERVK-9P63128 1117 aa5.22□□□□□ -1.57
RNU6-428P-201ENST00000362942 CYP2U1Q7Z449 544 aa5.22□□□□□ -1.57
RNU6-428P-201ENST00000362942 ZNF784Q8NCA9 323 aaPredicted RBP5.22□□□□□ -1.57
RNU6-428P-201ENST00000362942 TFIP11Q9UBB9 837 aaKnown RBP5.22□□□□□ -1.57
RNU6-428P-201ENST00000362942 CHIC2Q9UKJ5 165 aa5.22□□□□□ -1.57
RNU6-428P-201ENST00000362942 RBM19Q9Y4C8 960 aaKnown RBP5.22□□□□□ -1.57
RNU6-428P-201ENST00000362942 USP17L3A6NCW0 530 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 USP17L4A6NCW7 530 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 LMOD1P29536 600 aaPredicted RBP5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 SCARF1Q14162 830 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 TRAF7Q6Q0C0 670 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 USP17L2Q6R6M4 530 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 Q6ZNB5 142 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 TBC1D9Q6ZT07 1266 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 USP17L1Q7RTZ2 530 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 CRIPAKQ8N1N5 446 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 ITPKCQ96DU7 683 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 CCDC85AQ96PX6 553 aaPredicted RBP5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 UCN2Q96RP3 112 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 CYLDQ9NQC7 956 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 TMPRSS4Q9NRS4 437 aa5.21□□□□□ -1.58
RNU6-428P-201ENST00000362942 PIK3CDO00329 1044 aa5.2□□□□□ -1.58
RNU6-428P-201ENST00000362942 NCOA4Q13772 614 aa5.2□□□□□ -1.58
RNU6-428P-201ENST00000362942 ESCO1Q5FWF5 840 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms