RNA–Protein interactions for RNA: ENST00000362076.8

C1orf43-202, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-202ENST00000362076 PPP4R2Q9NY27 417 aa20.87■□□□□ 0.93
C1orf43-202ENST00000362076 RIPK4P57078 832 aa20.86■□□□□ 0.93
C1orf43-202ENST00000362076 IRX6P78412 446 aaPredicted RBP20.86■□□□□ 0.93
C1orf43-202ENST00000362076 IL16Q14005 1332 aa20.86■□□□□ 0.93
C1orf43-202ENST00000362076 HSP90AB2PQ58FF8 381 aa20.85■□□□□ 0.93
C1orf43-202ENST00000362076 SPINK5Q9NQ38 1064 aaPredicted RBP20.85■□□□□ 0.93
C1orf43-202ENST00000362076 RTL1A6NKG5 1358 aa20.85■□□□□ 0.93
C1orf43-202ENST00000362076 HMOX1P09601 288 aa20.85■□□□□ 0.93
C1orf43-202ENST00000362076 KRT28Q7Z3Y7 464 aa20.85■□□□□ 0.93
C1orf43-202ENST00000362076 SOX12O15370 315 aa20.84■□□□□ 0.93
C1orf43-202ENST00000362076 NFE2L2Q16236 605 aa20.84■□□□□ 0.93
C1orf43-202ENST00000362076 ARHGEF10O15013 1369 aa20.83■□□□□ 0.93
C1orf43-202ENST00000362076 CALD1Q05682 793 aaKnown RBP20.83■□□□□ 0.92
C1orf43-202ENST00000362076 LMOD3Q0VAK6 560 aa20.83■□□□□ 0.92
C1orf43-202ENST00000362076 NUTM2GQ5VZR2 741 aa20.83■□□□□ 0.92
C1orf43-202ENST00000362076 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.83■□□□□ 0.92
C1orf43-202ENST00000362076 TRIM35Q9UPQ4 493 aa20.83■□□□□ 0.92
C1orf43-202ENST00000362076 TRPM3Q9HCF6 1732 aaPredicted RBP20.82■□□□□ 0.92
C1orf43-202ENST00000362076 RGPD1P0DJD0 1748 aa20.82■□□□□ 0.92
C1orf43-202ENST00000362076 XIRP1Q702N8 1843 aaKnown RBP20.81■□□□□ 0.92
C1orf43-202ENST00000362076 CT47B1P0C2W7 299 aaPredicted RBP20.8■□□□□ 0.92
C1orf43-202ENST00000362076 HOXC9P31274 260 aa20.8■□□□□ 0.92
C1orf43-202ENST00000362076 NPHP3Q7Z494 1330 aa20.8■□□□□ 0.92
C1orf43-202ENST00000362076 SULT6B1Q6IMI4 303 aa20.8■□□□□ 0.92
C1orf43-202ENST00000362076 NFAT5O94916 1531 aa20.79■□□□□ 0.92
C1orf43-202ENST00000362076 PHACTR3Q96KR7 559 aa20.79■□□□□ 0.92
C1orf43-202ENST00000362076 SLIT3O75094 1523 aa20.78■□□□□ 0.92
C1orf43-202ENST00000362076 PHRF1Q9P1Y6 1649 aaKnown RBP20.78■□□□□ 0.92
C1orf43-202ENST00000362076 USP19O94966 1318 aa20.78■□□□□ 0.92
C1orf43-202ENST00000362076 ZNF335Q9H4Z2 1342 aaPredicted RBP20.78■□□□□ 0.92
C1orf43-202ENST00000362076 IP6K1Q92551 441 aa20.77■□□□□ 0.92
C1orf43-202ENST00000362076 LTN1O94822 1766 aa20.77■□□□□ 0.92
C1orf43-202ENST00000362076 KDRP35968 1356 aa20.76■□□□□ 0.91
C1orf43-202ENST00000362076 IGSF1Q8N6C5 1336 aa20.76■□□□□ 0.91
C1orf43-202ENST00000362076 GCP02774 474 aa20.75■□□□□ 0.91
C1orf43-202ENST00000362076 ALS2Q96Q42 1657 aa20.75■□□□□ 0.91
C1orf43-202ENST00000362076 XPCQ01831 940 aaPredicted RBP20.74■□□□□ 0.91
C1orf43-202ENST00000362076 LMOD2Q6P5Q4 547 aa20.73■□□□□ 0.91
C1orf43-202ENST00000362076 EYA1Q99502 592 aa20.73■□□□□ 0.91
C1orf43-202ENST00000362076 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
C1orf43-202ENST00000362076 DLG5Q8TDM6 1919 aa20.72■□□□□ 0.91
C1orf43-202ENST00000362076 ARHGEF25Q86VW2 580 aa20.72■□□□□ 0.91
C1orf43-202ENST00000362076 FANCIQ9NVI1 1328 aa20.71■□□□□ 0.91
C1orf43-202ENST00000362076 GNAI1P63096 354 aa20.71■□□□□ 0.91
C1orf43-202ENST00000362076 SLAIN2Q9P270 581 aa20.71■□□□□ 0.91
C1orf43-202ENST00000362076 IFT57Q9NWB7 429 aa20.7■□□□□ 0.9
C1orf43-202ENST00000362076 TNS3Q68CZ2 1445 aa20.69■□□□□ 0.9
C1orf43-202ENST00000362076 PXDNQ92626 1479 aa20.68■□□□□ 0.9
C1orf43-202ENST00000362076 BRINP3Q76B58 766 aa20.68■□□□□ 0.9
C1orf43-202ENST00000362076 GAS2L2Q8NHY3 880 aa20.68■□□□□ 0.9
C1orf43-202ENST00000362076 RARSP54136 660 aaKnown RBP20.68■□□□□ 0.9
C1orf43-202ENST00000362076 ZNF428Q96B54 188 aa20.68■□□□□ 0.9
C1orf43-202ENST00000362076 PLIN1O60240 522 aa20.67■□□□□ 0.9
C1orf43-202ENST00000362076 SPATA31A3Q5VYP0 1347 aa20.67■□□□□ 0.9
C1orf43-202ENST00000362076 CFAP44Q96MT7 982 aa20.66■□□□□ 0.9
C1orf43-202ENST00000362076 HTATSF1O43719 755 aaKnown RBP20.65■□□□□ 0.9
C1orf43-202ENST00000362076 ZNF853P0CG23 659 aa20.65■□□□□ 0.9
C1orf43-202ENST00000362076 PDE3AQ14432 1141 aa20.65■□□□□ 0.9
C1orf43-202ENST00000362076 TSR2Q969E8 191 aaKnown RBP20.65■□□□□ 0.9
C1orf43-202ENST00000362076 CCDC136Q96JN2 1154 aa20.65■□□□□ 0.9
C1orf43-202ENST00000362076 BCAR3O75815 825 aa20.64■□□□□ 0.9
C1orf43-202ENST00000362076 EXOSC9Q06265 439 aaKnown RBP20.64■□□□□ 0.9
C1orf43-202ENST00000362076 EXOC6Q8TAG9 804 aa20.64■□□□□ 0.9
C1orf43-202ENST00000362076 LTV1Q96GA3 475 aaPredicted RBP20.63■□□□□ 0.89
C1orf43-202ENST00000362076 SOS2Q07890 1332 aaPredicted RBP20.63■□□□□ 0.89
C1orf43-202ENST00000362076 MED1Q15648 1581 aaPredicted RBP20.62■□□□□ 0.89
C1orf43-202ENST00000362076 ABCC6O95255 1503 aa20.62■□□□□ 0.89
C1orf43-202ENST00000362076 B4GALNT3Q6L9W6 998 aa20.62■□□□□ 0.89
C1orf43-202ENST00000362076 RTF1Q92541 710 aaKnown RBP20.62■□□□□ 0.89
C1orf43-202ENST00000362076 DDX17Q92841 729 aaKnown RBP20.62■□□□□ 0.89
C1orf43-202ENST00000362076 ZBTB7CA1YPR0 619 aa20.61■□□□□ 0.89
C1orf43-202ENST00000362076 CANXP27824 592 aaKnown RBP20.61■□□□□ 0.89
C1orf43-202ENST00000362076 MTHFSDQ2M296 383 aaKnown RBP20.61■□□□□ 0.89
C1orf43-202ENST00000362076 MS4A1P11836 297 aa20.6■□□□□ 0.89
C1orf43-202ENST00000362076 CRBNQ96SW2 442 aa20.6■□□□□ 0.89
C1orf43-202ENST00000362076 LAS1LQ9Y4W2 734 aaKnown RBP20.6■□□□□ 0.89
C1orf43-202ENST00000362076 HAP1P54257 671 aaPredicted RBP20.59■□□□□ 0.89
C1orf43-202ENST00000362076 ALDH1L2Q3SY69 923 aa20.59■□□□□ 0.89
C1orf43-202ENST00000362076 NBPF6Q5VWK0 638 aa20.59■□□□□ 0.89
C1orf43-202ENST00000362076 ANKRD24Q8TF21 1146 aa20.59■□□□□ 0.89
C1orf43-202ENST00000362076 NBPF4Q96M43 638 aa20.59■□□□□ 0.89
C1orf43-202ENST00000362076 THUMPD2Q9BTF0 503 aaKnown RBP20.59■□□□□ 0.89
C1orf43-202ENST00000362076 NCAPD2Q15021 1401 aa20.58■□□□□ 0.89
C1orf43-202ENST00000362076 FAM83GA6ND36 823 aa20.58■□□□□ 0.88
C1orf43-202ENST00000362076 MBIPQ9NS73 344 aa20.58■□□□□ 0.88
C1orf43-202ENST00000362076 CPDO75976 1380 aa20.58■□□□□ 0.88
C1orf43-202ENST00000362076 AAMPQ13685 434 aa20.57■□□□□ 0.88
C1orf43-202ENST00000362076 C20orf194Q5TEA3 1177 aa20.57■□□□□ 0.88
C1orf43-202ENST00000362076 GNAT3A8MTJ3 354 aa20.56■□□□□ 0.88
C1orf43-202ENST00000362076 CHL1O00533 1208 aa20.56■□□□□ 0.88
C1orf43-202ENST00000362076 CRYBG1Q9Y4K1 1723 aa20.56■□□□□ 0.88
C1orf43-202ENST00000362076 BRPF1P55201 1214 aaPredicted RBP20.55■□□□□ 0.88
C1orf43-202ENST00000362076 ZC3H6P61129 1189 aaKnown RBP20.55■□□□□ 0.88
C1orf43-202ENST00000362076 AMOTQ4VCS5 1084 aa20.55■□□□□ 0.88
C1orf43-202ENST00000362076 DCTN1Q14203 1278 aa20.55■□□□□ 0.88
C1orf43-202ENST00000362076 SMC4Q9NTJ3 1288 aa20.55■□□□□ 0.88
C1orf43-202ENST00000362076 CAMTA1Q9Y6Y1 1673 aa20.54■□□□□ 0.88
C1orf43-202ENST00000362076 NHSL1Q5SYE7 1610 aa20.54■□□□□ 0.88
C1orf43-202ENST00000362076 MAP3K5Q99683 1374 aa20.54■□□□□ 0.88
C1orf43-202ENST00000362076 IPO8O15397 1037 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms