RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
CTR9-201ENST00000361367 WASHC4Q2M389 1173 aa16.91■□□□□ 0.3
CTR9-201ENST00000361367 FAM184AQ8NB25 1140 aa16.91■□□□□ 0.3
CTR9-201ENST00000361367 C19orf44Q9H6X5 657 aa16.91■□□□□ 0.3
CTR9-201ENST00000361367 TMOD3Q9NYL9 352 aa16.91■□□□□ 0.3
CTR9-201ENST00000361367 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
CTR9-201ENST00000361367 CPLX2Q6PUV4 134 aaKnown RBP16.9■□□□□ 0.3
CTR9-201ENST00000361367 PDZRN3Q9UPQ7 1066 aa16.9■□□□□ 0.3
CTR9-201ENST00000361367 SLC4A3P48751 1232 aa16.9■□□□□ 0.3
CTR9-201ENST00000361367 SYAP1Q96A49 352 aaPredicted RBP16.9■□□□□ 0.3
CTR9-201ENST00000361367 ERC1Q8IUD2 1116 aa16.89■□□□□ 0.3
CTR9-201ENST00000361367 CDC45O75419 566 aa16.89■□□□□ 0.29
CTR9-201ENST00000361367 STARD3NLO95772 234 aa16.89■□□□□ 0.29
CTR9-201ENST00000361367 ABCA8O94911 1581 aa16.89■□□□□ 0.29
CTR9-201ENST00000361367 AKAP17AQ02040 695 aaKnown RBP16.89■□□□□ 0.29
CTR9-201ENST00000361367 PUS7Q96PZ0 661 aaKnown RBP16.89■□□□□ 0.29
CTR9-201ENST00000361367 CSPP1Q1MSJ5 1256 aa16.89■□□□□ 0.29
CTR9-201ENST00000361367 HSP90AB2PQ58FF8 381 aa16.89■□□□□ 0.29
CTR9-201ENST00000361367 CCDC34Q96HJ3 373 aa16.89■□□□□ 0.29
CTR9-201ENST00000361367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.89■□□□□ 0.29
CTR9-201ENST00000361367 H3BQV1 296 aa16.88■□□□□ 0.29
CTR9-201ENST00000361367 IFFO2Q5TF58 517 aa16.88■□□□□ 0.29
CTR9-201ENST00000361367 FSD1Q9BTV5 496 aa16.88■□□□□ 0.29
CTR9-201ENST00000361367 CNNM1Q9NRU3 951 aa16.88■□□□□ 0.29
CTR9-201ENST00000361367 ANKRD24Q8TF21 1146 aa16.88■□□□□ 0.29
CTR9-201ENST00000361367 TRIM34Q9BYJ4 488 aa16.88■□□□□ 0.29
CTR9-201ENST00000361367 CNTROBQ8N137 903 aa16.87■□□□□ 0.29
CTR9-201ENST00000361367 SSH1Q8WYL5 1049 aa16.87■□□□□ 0.29
CTR9-201ENST00000361367 ARHGEF12Q9NZN5 1544 aa16.87■□□□□ 0.29
CTR9-201ENST00000361367 TOM1O60784 492 aa16.87■□□□□ 0.29
CTR9-201ENST00000361367 L1TD1Q5T7N2 865 aaKnown RBP16.87■□□□□ 0.29
CTR9-201ENST00000361367 RASSF8Q8NHQ8 419 aa16.87■□□□□ 0.29
CTR9-201ENST00000361367 SF3A1Q15459 793 aaKnown RBP16.86■□□□□ 0.29
CTR9-201ENST00000361367 SIL1Q9H173 461 aa16.86■□□□□ 0.29
CTR9-201ENST00000361367 EXOC5O00471 708 aa16.86■□□□□ 0.29
CTR9-201ENST00000361367 YTHDC2Q9H6S0 1430 aaKnown RBP16.86■□□□□ 0.29
CTR9-201ENST00000361367 UBAP1LF5GYI3 381 aa16.86■□□□□ 0.29
CTR9-201ENST00000361367 SRGAP3O43295 1099 aa16.86■□□□□ 0.29
CTR9-201ENST00000361367 CCDC27Q2M243 656 aa16.86■□□□□ 0.29
CTR9-201ENST00000361367 FANCIQ9NVI1 1328 aa16.85■□□□□ 0.29
CTR9-201ENST00000361367 MAST1Q9Y2H9 1570 aa16.85■□□□□ 0.29
CTR9-201ENST00000361367 DNAJC2Q99543 621 aaKnown RBP16.85■□□□□ 0.29
CTR9-201ENST00000361367 C22orf23Q9BZE7 217 aa16.85■□□□□ 0.29
CTR9-201ENST00000361367 CPLX1O14810 134 aa16.85■□□□□ 0.29
CTR9-201ENST00000361367 TMEM57Q8N5G2 664 aa16.85■□□□□ 0.29
CTR9-201ENST00000361367 RARSP54136 660 aaKnown RBP16.84■□□□□ 0.29
CTR9-201ENST00000361367 CCDC57Q2TAC2 916 aa16.84■□□□□ 0.29
CTR9-201ENST00000361367 DRC7Q8IY82 874 aa16.84■□□□□ 0.29
CTR9-201ENST00000361367 TBC1D2BQ9UPU7 963 aa16.84■□□□□ 0.29
CTR9-201ENST00000361367 EIF2AK4Q9P2K8 1649 aaKnown RBP16.84■□□□□ 0.29
CTR9-201ENST00000361367 RAD21O60216 631 aa16.84■□□□□ 0.29
CTR9-201ENST00000361367 IFNL2Q8IZJ0 200 aa16.84■□□□□ 0.29
CTR9-201ENST00000361367 LRRCC1Q9C099 1032 aa16.84■□□□□ 0.29
CTR9-201ENST00000361367 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
CTR9-201ENST00000361367 YEATS2Q9ULM3 1422 aa16.83■□□□□ 0.29
CTR9-201ENST00000361367 CLSTN1O94985 981 aa16.83■□□□□ 0.28
CTR9-201ENST00000361367 ATP6V1DQ9Y5K8 247 aa16.83■□□□□ 0.28
CTR9-201ENST00000361367 ALDH1L2Q3SY69 923 aa16.83■□□□□ 0.28
CTR9-201ENST00000361367 RALYLQ86SE5 291 aaKnown RBP16.83■□□□□ 0.28
CTR9-201ENST00000361367 MBD5Q9P267 1494 aa16.82■□□□□ 0.28
CTR9-201ENST00000361367 MPHOSPH8Q99549 860 aa16.82■□□□□ 0.28
CTR9-201ENST00000361367 ASXL1Q8IXJ9 1541 aa16.82■□□□□ 0.28
CTR9-201ENST00000361367 MARCH6O60337 910 aa16.82■□□□□ 0.28
CTR9-201ENST00000361367 FOXD4L6Q3SYB3 417 aaPredicted RBP16.82■□□□□ 0.28
CTR9-201ENST00000361367 FOXD4L3Q6VB84 417 aaPredicted RBP16.82■□□□□ 0.28
CTR9-201ENST00000361367 RPAP2Q8IXW5 612 aaPredicted RBP16.82■□□□□ 0.28
CTR9-201ENST00000361367 UHRF1BP1Q6BDS2 1440 aa16.81■□□□□ 0.28
CTR9-201ENST00000361367 ZFYVE16Q7Z3T8 1539 aa16.81■□□□□ 0.28
CTR9-201ENST00000361367 CCDC158Q5M9N0 1113 aa16.81■□□□□ 0.28
CTR9-201ENST00000361367 FAM83GA6ND36 823 aa16.81■□□□□ 0.28
CTR9-201ENST00000361367 MCTP1Q6DN14 999 aa16.81■□□□□ 0.28
CTR9-201ENST00000361367 LARP1Q6PKG0 1096 aaKnown RBP16.8■□□□□ 0.28
CTR9-201ENST00000361367 POLKQ9UBT6 870 aa16.8■□□□□ 0.28
CTR9-201ENST00000361367 CHD1O14646 1710 aa16.8■□□□□ 0.28
CTR9-201ENST00000361367 ERICH2A1L162 156 aa16.8■□□□□ 0.28
CTR9-201ENST00000361367 NFXL1Q6ZNB6 911 aa16.8■□□□□ 0.28
CTR9-201ENST00000361367 BICDL1Q6ZP65 573 aa16.8■□□□□ 0.28
CTR9-201ENST00000361367 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.8■□□□□ 0.28
CTR9-201ENST00000361367 VPS53Q5VIR6 699 aa16.8■□□□□ 0.28
CTR9-201ENST00000361367 FMNL2Q96PY5 1086 aa16.8■□□□□ 0.28
CTR9-201ENST00000361367 NPATQ14207 1427 aa16.8■□□□□ 0.28
CTR9-201ENST00000361367 NKTRP30414 1462 aaKnown RBP16.79■□□□□ 0.28
CTR9-201ENST00000361367 CABLES1Q8TDN4 633 aa16.79■□□□□ 0.28
CTR9-201ENST00000361367 CARD14Q9BXL6 1004 aa16.79■□□□□ 0.28
CTR9-201ENST00000361367 DBF4Q9UBU7 674 aaPredicted RBP16.79■□□□□ 0.28
CTR9-201ENST00000361367 CEP126Q9P2H0 1117 aa16.79■□□□□ 0.28
CTR9-201ENST00000361367 DHX16O60231 1041 aaKnown RBP16.78■□□□□ 0.28
CTR9-201ENST00000361367 TRIM29Q14134 588 aa16.78■□□□□ 0.28
CTR9-201ENST00000361367 GNL3LQ9NVN8 582 aaKnown RBP16.78■□□□□ 0.28
CTR9-201ENST00000361367 PPP1R1BQ9UD71 204 aaPredicted RBP16.78■□□□□ 0.28
CTR9-201ENST00000361367 ABCC1P33527 1531 aa16.78■□□□□ 0.28
CTR9-201ENST00000361367 ARHGEF5Q12774 1597 aa16.78■□□□□ 0.28
CTR9-201ENST00000361367 HIP1O00291 1037 aa16.78■□□□□ 0.28
CTR9-201ENST00000361367 TTC39AQ5SRH9 613 aa16.78■□□□□ 0.28
CTR9-201ENST00000361367 CCDC85AQ96PX6 553 aaPredicted RBP16.78■□□□□ 0.28
CTR9-201ENST00000361367 HMGB2P26583 209 aaKnown RBP16.78■□□□□ 0.28
CTR9-201ENST00000361367 A0A1W2PP64 1363 aa16.77■□□□□ 0.28
CTR9-201ENST00000361367 MYO5CQ9NQX4 1742 aa16.77■□□□□ 0.28
CTR9-201ENST00000361367 F6X3S4 739 aa16.77■□□□□ 0.27
CTR9-201ENST00000361367 EIF4A2Q14240 407 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms