RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 WDR33Q9C0J8 1336 aaKnown RBP9.86□□□□□ -0.83
NCKAP1-202ENST00000361354 FAM184BQ9ULE4 1060 aa9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 CASQ1P31415 396 aa9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 CTR9Q6PD62 1173 aa9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 TBC1D2BQ9UPU7 963 aa9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 SPA17Q15506 151 aa9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 GTPBP4Q9BZE4 634 aaKnown RBP9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 SFPQP23246 707 aaKnown RBP eCLIP9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 ANKS4BQ8N8V4 417 aa9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 PTPN14Q15678 1187 aa9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 MSL1Q68DK7 614 aa9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 NSRP1Q9H0G5 558 aaKnown RBP9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.85□□□□□ -0.834e-6■■□□□ 11.9
NCKAP1-202ENST00000361354 MYO15BQ96JP2 1530 aa9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 EXOC6Q8TAG9 804 aa9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 BAZ1AQ9NRL2 1556 aaPredicted RBP9.85□□□□□ -0.83
NCKAP1-202ENST00000361354 LTV1Q96GA3 475 aaPredicted RBP9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 CEP112Q8N8E3 955 aa9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 PRPF40AO75400 957 aaKnown RBP9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 BMP2KQ9NSY1 1161 aaPredicted RBP9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 HOMER2Q9NSB8 354 aa9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 PKD2Q13563 968 aa9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 CCDC6Q16204 474 aa9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 SMARCC1Q92922 1105 aaPredicted RBP9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 PABPN1LA6NDY0 278 aaKnown RBP9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 IVLP07476 585 aa9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 EIF5P55010 431 aaKnown RBP9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 DDX12PQ92771 950 aa9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 RRP7AQ9Y3A4 280 aaKnown RBP9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 RAB3IL1Q8TBN0 382 aa9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 FKBP5Q13451 457 aaPredicted RBP9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 FMN1Q68DA7 1419 aa9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 CDKL5O76039 1030 aa9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 PLIN1O60240 522 aa9.84□□□□□ -0.83
NCKAP1-202ENST00000361354 UPF3BQ9BZI7 483 aaKnown RBP9.83□□□□□ -0.84
NCKAP1-202ENST00000361354 TSNARE1Q96NA8 513 aa9.83□□□□□ -0.84
NCKAP1-202ENST00000361354 COG3Q96JB2 828 aa9.83□□□□□ -0.84
NCKAP1-202ENST00000361354 PRDM10Q9NQV6 1147 aa9.83□□□□□ -0.84
NCKAP1-202ENST00000361354 FSD1Q9BTV5 496 aa9.83□□□□□ -0.84
NCKAP1-202ENST00000361354 ANAPC4Q9UJX5 808 aa9.83□□□□□ -0.84
NCKAP1-202ENST00000361354 NAA15Q9BXJ9 866 aaKnown RBP9.83□□□□□ -0.84
NCKAP1-202ENST00000361354 ZNF526Q8TF50 670 aaPredicted RBP9.83□□□□□ -0.84
NCKAP1-202ENST00000361354 ZHX3Q9H4I2 956 aa9.83□□□□□ -0.84
NCKAP1-202ENST00000361354 ALS2CR12Q96Q35 445 aa9.83□□□□□ -0.84
NCKAP1-202ENST00000361354 CCDC83Q8IWF9 413 aa9.83□□□□□ -0.84
NCKAP1-202ENST00000361354 PDIA4P13667 645 aaKnown RBP9.82□□□□□ -0.84
NCKAP1-202ENST00000361354 PPM1FP49593 454 aaPredicted RBP9.82□□□□□ -0.84
NCKAP1-202ENST00000361354 ZSCAN30Q86W11 494 aa9.82□□□□□ -0.84
NCKAP1-202ENST00000361354 NOL7Q9UMY1 257 aaKnown RBP9.82□□□□□ -0.84
NCKAP1-202ENST00000361354 ZFYP08048 801 aaPredicted RBP9.82□□□□□ -0.84
NCKAP1-202ENST00000361354 MATR3P43243 847 aaKnown RBP eCLIP9.82□□□□□ -0.842e-6■■■■□ 23.9
NCKAP1-202ENST00000361354 GTF2F1P35269 517 aaKnown RBP eCLIP9.82□□□□□ -0.844e-10■■■■■ 29.2
NCKAP1-202ENST00000361354 ATP2B1P20020 1258 aa9.82□□□□□ -0.84
NCKAP1-202ENST00000361354 MLECQ14165 292 aa9.82□□□□□ -0.84
NCKAP1-202ENST00000361354 CCDC178Q5BJE1 867 aa9.82□□□□□ -0.84
NCKAP1-202ENST00000361354 MIPOL1Q8TD10 442 aa9.82□□□□□ -0.84
NCKAP1-202ENST00000361354 IKBKGQ9Y6K9 419 aa9.82□□□□□ -0.84
NCKAP1-202ENST00000361354 CEBPZQ03701 1054 aaKnown RBP9.82□□□□□ -0.84
NCKAP1-202ENST00000361354 FEZ2Q9UHY8 353 aaPredicted RBP9.82□□□□□ -0.84
NCKAP1-202ENST00000361354 CFAP100Q494V2 611 aa9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 PPP1R14CQ8TAE6 165 aa9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 ANKRD30AQ9BXX3 1397 aa9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 CBX1P83916 185 aa9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 WRNQ14191 1432 aaPredicted RBP eCLIP9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 HMGB1P1B2RPK0 211 aaPredicted RBP9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 SUDS3Q9H7L9 328 aaPredicted RBP9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 IL27Q8NEV9 243 aa9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 LNPKQ9C0E8 428 aa9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 EID1Q9Y6B2 187 aa9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 MSH5O43196 834 aa9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 SPECC1Q5M775 1068 aa9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 FERMT1Q9BQL6 677 aa9.81□□□□□ -0.84
NCKAP1-202ENST00000361354 CCDC57Q2TAC2 916 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 NUP62CLQ9H1M0 184 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 EIF2S2P20042 333 aaKnown RBP9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 MYO10Q9HD67 2058 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 VGFO15240 615 aaPredicted RBP9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 SMC6Q96SB8 1091 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 CEP131Q9UPN4 1083 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 MTMR7Q9Y216 660 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 NUP155O75694 1391 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 PAFAH1B1P43034 410 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 RSRC1Q96IZ7 334 aaKnown RBP9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 LMAN1P49257 510 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 MXRA7P84157 204 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 RRBP1Q9P2E9 1410 aaKnown RBP9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 MACROD2A1Z1Q3 448 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 MKRN1Q9UHC7 482 aaKnown RBP9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 CFAP58Q5T655 872 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 CTNNBL1Q8WYA6 563 aaPredicted RBP9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 CCDC158Q5M9N0 1113 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 RPUSD2Q8IZ73 545 aaKnown RBP9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 SSX2IPQ9Y2D8 614 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 UBTFL1P0CB47 393 aaPredicted RBP9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 SPATA32Q96LK8 384 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 NEUROD6Q96NK8 337 aa9.8□□□□□ -0.84
NCKAP1-202ENST00000361354 USO1O60763 962 aaKnown RBP9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 GOLGA6L9A6NEM1 432 aa9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 NEK4P51957 841 aa9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 HYPKQ9NX55 129 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms