RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 PLEKHH1Q9ULM0 1364 aa16.62■□□□□ 0.25
SMC5-201ENST00000361138 URB2Q14146 1524 aaKnown RBP16.62■□□□□ 0.25
SMC5-201ENST00000361138 ALDH1L2Q3SY69 923 aa16.62■□□□□ 0.25
SMC5-201ENST00000361138 SSH1Q8WYL5 1049 aa16.62■□□□□ 0.25
SMC5-201ENST00000361138 PCMTD1Q96MG8 357 aaPredicted RBP16.62■□□□□ 0.25
SMC5-201ENST00000361138 RALGAPBQ86X10 1494 aa16.62■□□□□ 0.25
SMC5-201ENST00000361138 ERICH4A6NGS2 130 aa16.61■□□□□ 0.25
SMC5-201ENST00000361138 CLSTN1O94985 981 aa16.61■□□□□ 0.25
SMC5-201ENST00000361138 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
SMC5-201ENST00000361138 PPP4R3BQ5MIZ7 849 aa16.61■□□□□ 0.25
SMC5-201ENST00000361138 CLASRPQ8N2M8 674 aaKnown RBP16.61■□□□□ 0.25
SMC5-201ENST00000361138 ANKRD1Q15327 319 aa16.61■□□□□ 0.25
SMC5-201ENST00000361138 RPAP2Q8IXW5 612 aaPredicted RBP16.61■□□□□ 0.25
SMC5-201ENST00000361138 MAP4K4O95819 1239 aaPredicted RBP16.6■□□□□ 0.25
SMC5-201ENST00000361138 CEBPZQ03701 1054 aaKnown RBP16.6■□□□□ 0.25
SMC5-201ENST00000361138 LARP1BQ659C4 914 aaKnown RBP16.6■□□□□ 0.25
SMC5-201ENST00000361138 CGNQ9P2M7 1197 aaKnown RBP16.6■□□□□ 0.25
SMC5-201ENST00000361138 CCDC141Q6ZP82 1450 aa16.6■□□□□ 0.25
SMC5-201ENST00000361138 ZHX1Q9UKY1 873 aaPredicted RBP16.6■□□□□ 0.25
SMC5-201ENST00000361138 TRDNQ13061 729 aa16.6■□□□□ 0.25
SMC5-201ENST00000361138 SPATA32Q96LK8 384 aa16.6■□□□□ 0.25
SMC5-201ENST00000361138 ZSCAN31Q96LW9 406 aaPredicted RBP16.6■□□□□ 0.25
SMC5-201ENST00000361138 RRAGDQ9NQL2 400 aaPredicted RBP16.6■□□□□ 0.25
SMC5-201ENST00000361138 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
SMC5-201ENST00000361138 MAP3K11Q16584 847 aa16.59■□□□□ 0.25
SMC5-201ENST00000361138 ABCA10Q8WWZ4 1543 aa16.59■□□□□ 0.25
SMC5-201ENST00000361138 TBC1D9Q6ZT07 1266 aa16.59■□□□□ 0.25
SMC5-201ENST00000361138 RBM27Q9P2N5 1060 aaKnown RBP16.59■□□□□ 0.25
SMC5-201ENST00000361138 EID1Q9Y6B2 187 aa16.59■□□□□ 0.25
SMC5-201ENST00000361138 PARD3Q8TEW0 1356 aa16.59■□□□□ 0.25
SMC5-201ENST00000361138 BMP2KLQ5H9B9 411 aa16.59■□□□□ 0.25
SMC5-201ENST00000361138 PRIMPOLQ96LW4 560 aa16.58■□□□□ 0.25
SMC5-201ENST00000361138 FMNL2Q96PY5 1086 aa16.58■□□□□ 0.25
SMC5-201ENST00000361138 CFAP43Q8NDM7 1665 aa16.58■□□□□ 0.25
SMC5-201ENST00000361138 NFXL1Q6ZNB6 911 aa16.58■□□□□ 0.25
SMC5-201ENST00000361138 TRIM27P14373 513 aa16.58■□□□□ 0.24
SMC5-201ENST00000361138 USP25Q9UHP3 1055 aa16.58■□□□□ 0.24
SMC5-201ENST00000361138 LRSAM1Q6UWE0 723 aa16.57■□□□□ 0.24
SMC5-201ENST00000361138 FCHSD2O94868 740 aa16.57■□□□□ 0.24
SMC5-201ENST00000361138 ERC1Q8IUD2 1116 aa16.57■□□□□ 0.24
SMC5-201ENST00000361138 STK3Q13188 491 aa16.57■□□□□ 0.24
SMC5-201ENST00000361138 SNX21Q969T3 373 aa16.57■□□□□ 0.24
SMC5-201ENST00000361138 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
SMC5-201ENST00000361138 ABCC11Q96J66 1382 aa16.56■□□□□ 0.24
SMC5-201ENST00000361138 APPP05067 770 aa16.56■□□□□ 0.24
SMC5-201ENST00000361138 SAFBQ15424 915 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMC5-201ENST00000361138 CAMK4Q16566 473 aa16.56■□□□□ 0.24
SMC5-201ENST00000361138 UVSSAQ2YD98 709 aa16.56■□□□□ 0.24
SMC5-201ENST00000361138 SERPINC1P01008 464 aa16.55■□□□□ 0.24
SMC5-201ENST00000361138 HDAC1Q13547 482 aaPredicted RBP16.55■□□□□ 0.24
SMC5-201ENST00000361138 ADCY5O95622 1261 aa16.55■□□□□ 0.24
SMC5-201ENST00000361138 CAGE1Q8TC20 777 aa16.55■□□□□ 0.24
SMC5-201ENST00000361138 RNF123Q5XPI4 1314 aa16.55■□□□□ 0.24
SMC5-201ENST00000361138 SMARCA5O60264 1052 aaPredicted RBP16.55■□□□□ 0.24
SMC5-201ENST00000361138 JAKMIP1Q96N16 626 aaKnown RBP16.55■□□□□ 0.24
SMC5-201ENST00000361138 STK38Q15208 465 aa16.54■□□□□ 0.24
SMC5-201ENST00000361138 CCDC47Q96A33 483 aaKnown RBP16.54■□□□□ 0.24
SMC5-201ENST00000361138 PPP6R1Q9UPN7 881 aa16.54■□□□□ 0.24
SMC5-201ENST00000361138 UGGT2Q9NYU1 1516 aa16.54■□□□□ 0.24
SMC5-201ENST00000361138 NUCB1Q02818 461 aa16.54■□□□□ 0.24
SMC5-201ENST00000361138 PDIA4P13667 645 aaKnown RBP16.54■□□□□ 0.24
SMC5-201ENST00000361138 NFE2L2Q16236 605 aa16.54■□□□□ 0.24
SMC5-201ENST00000361138 TTLL5Q6EMB2 1281 aa16.54■□□□□ 0.24
SMC5-201ENST00000361138 RALYLQ86SE5 291 aaKnown RBP16.54■□□□□ 0.24
SMC5-201ENST00000361138 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
SMC5-201ENST00000361138 PTPN14Q15678 1187 aa16.54■□□□□ 0.24
SMC5-201ENST00000361138 OFD1O75665 1012 aa16.53■□□□□ 0.24
SMC5-201ENST00000361138 PCDHB15Q9Y5E8 787 aa16.53■□□□□ 0.24
SMC5-201ENST00000361138 CBFA2T2O43439 604 aa16.53■□□□□ 0.24
SMC5-201ENST00000361138 H0YHG0 523 aa16.53■□□□□ 0.24
SMC5-201ENST00000361138 ZNF608Q9ULD9 1512 aaPredicted RBP16.53■□□□□ 0.24
SMC5-201ENST00000361138 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
SMC5-201ENST00000361138 KIF2AO00139 706 aaPredicted RBP16.52■□□□□ 0.24
SMC5-201ENST00000361138 CASTP20810 708 aaKnown RBP16.52■□□□□ 0.24
SMC5-201ENST00000361138 ME1P48163 572 aa16.52■□□□□ 0.24
SMC5-201ENST00000361138 CEP57L1Q8IYX8 460 aa16.52■□□□□ 0.24
SMC5-201ENST00000361138 SMARCE1Q969G3 411 aa16.52■□□□□ 0.24
SMC5-201ENST00000361138 CFAP45Q9UL16 551 aa16.52■□□□□ 0.24
SMC5-201ENST00000361138 THOC2Q8NI27 1593 aaKnown RBP16.52■□□□□ 0.24
SMC5-201ENST00000361138 RAB3GAP1Q15042 981 aa16.52■□□□□ 0.24
SMC5-201ENST00000361138 CWC27Q6UX04 472 aaKnown RBP16.52■□□□□ 0.24
SMC5-201ENST00000361138 PRAM1Q96QH2 718 aa16.52■□□□□ 0.24
SMC5-201ENST00000361138 KDM2BQ8NHM5 1336 aa16.52■□□□□ 0.24
SMC5-201ENST00000361138 FILIP1Q7Z7B0 1213 aa16.52■□□□□ 0.23
SMC5-201ENST00000361138 PATL2C9JE40 543 aaKnown RBP16.52■□□□□ 0.23
SMC5-201ENST00000361138 TTC5Q8N0Z6 440 aa16.52■□□□□ 0.23
SMC5-201ENST00000361138 EIF3JO75822 258 aaKnown RBP16.51■□□□□ 0.23
SMC5-201ENST00000361138 SEC24BO95487 1268 aa16.51■□□□□ 0.23
SMC5-201ENST00000361138 TNNT1P13805 278 aa16.51■□□□□ 0.23
SMC5-201ENST00000361138 HS1BP3Q53T59 392 aa16.51■□□□□ 0.23
SMC5-201ENST00000361138 RIC3Q7Z5B4 369 aa16.51■□□□□ 0.23
SMC5-201ENST00000361138 TSPYL1Q9H0U9 437 aa16.51■□□□□ 0.23
SMC5-201ENST00000361138 ZKSCAN5Q9Y2L8 839 aa16.51■□□□□ 0.23
SMC5-201ENST00000361138 ERLIN1O75477 346 aa16.51■□□□□ 0.23
SMC5-201ENST00000361138 MX1P20591 662 aa16.51■□□□□ 0.23
SMC5-201ENST00000361138 RDXP35241 583 aaKnown RBP16.51■□□□□ 0.23
SMC5-201ENST00000361138 SCAF11Q99590 1463 aaKnown RBP16.51■□□□□ 0.23
SMC5-201ENST00000361138 AFAP1Q8N556 730 aa16.51■□□□□ 0.23
SMC5-201ENST00000361138 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
SMC5-201ENST00000361138 ERICH2A1L162 156 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms