RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 CD163L1Q9NR16 1453 aa16.75■□□□□ 0.27
PPARGC1B-202ENST00000360453 NFE2L2Q16236 605 aa16.75■□□□□ 0.27
PPARGC1B-202ENST00000360453 ALDH1L2Q3SY69 923 aa16.75■□□□□ 0.27
PPARGC1B-202ENST00000360453 AK9Q5TCS8 1911 aa16.75■□□□□ 0.27
PPARGC1B-202ENST00000360453 LMTK2Q8IWU2 1503 aa16.75■□□□□ 0.27
PPARGC1B-202ENST00000360453 POGZQ7Z3K3 1410 aa16.74■□□□□ 0.27
PPARGC1B-202ENST00000360453 K7ELQ4 463 aaPredicted RBP16.74■□□□□ 0.27
PPARGC1B-202ENST00000360453 MLECQ14165 292 aa16.74■□□□□ 0.27
PPARGC1B-202ENST00000360453 RAB3GAP1Q15042 981 aa16.74■□□□□ 0.27
PPARGC1B-202ENST00000360453 NEXMIFQ5QGS0 1516 aa16.74■□□□□ 0.27
PPARGC1B-202ENST00000360453 GBP4Q96PP9 640 aa16.73■□□□□ 0.27
PPARGC1B-202ENST00000360453 LRRC7Q96NW7 1537 aa16.73■□□□□ 0.27
PPARGC1B-202ENST00000360453 SNX21Q969T3 373 aa16.73■□□□□ 0.27
PPARGC1B-202ENST00000360453 TRIM44Q96DX7 344 aaPredicted RBP16.73■□□□□ 0.27
PPARGC1B-202ENST00000360453 AEBP1Q8IUX7 1158 aa16.72■□□□□ 0.27
PPARGC1B-202ENST00000360453 USP32Q8NFA0 1604 aa16.72■□□□□ 0.27
PPARGC1B-202ENST00000360453 MIS18AQ9NYP9 233 aa16.72■□□□□ 0.27
PPARGC1B-202ENST00000360453 ESPNB1AK53 854 aa16.72■□□□□ 0.27
PPARGC1B-202ENST00000360453 DDX49Q9Y6V7 483 aaKnown RBP16.71■□□□□ 0.27
PPARGC1B-202ENST00000360453 YTHDC2Q9H6S0 1430 aaKnown RBP16.71■□□□□ 0.27
PPARGC1B-202ENST00000360453 MCTP1Q6DN14 999 aa16.71■□□□□ 0.27
PPARGC1B-202ENST00000360453 GCC1Q96CN9 775 aa16.71■□□□□ 0.27
PPARGC1B-202ENST00000360453 PUS7Q96PZ0 661 aaKnown RBP16.71■□□□□ 0.27
PPARGC1B-202ENST00000360453 CLCN1P35523 988 aa16.7■□□□□ 0.26
PPARGC1B-202ENST00000360453 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
PPARGC1B-202ENST00000360453 MCM10Q7L590 875 aa16.7■□□□□ 0.26
PPARGC1B-202ENST00000360453 PTPRMP28827 1452 aa16.7■□□□□ 0.26
PPARGC1B-202ENST00000360453 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
PPARGC1B-202ENST00000360453 NCOA3Q9Y6Q9 1424 aa16.7■□□□□ 0.26
PPARGC1B-202ENST00000360453 YEATS2Q9ULM3 1422 aa16.69■□□□□ 0.26
PPARGC1B-202ENST00000360453 GNAI1P63096 354 aa16.69■□□□□ 0.26
PPARGC1B-202ENST00000360453 CDC45O75419 566 aa16.69■□□□□ 0.26
PPARGC1B-202ENST00000360453 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
PPARGC1B-202ENST00000360453 TXNDC2Q86VQ3 553 aa16.69■□□□□ 0.26
PPARGC1B-202ENST00000360453 UBE2Q2Q8WVN8 375 aa16.69■□□□□ 0.26
PPARGC1B-202ENST00000360453 TPRNQ4KMQ1 711 aa16.68■□□□□ 0.26
PPARGC1B-202ENST00000360453 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
PPARGC1B-202ENST00000360453 ZGPATQ8N5A5 531 aaKnown RBP16.68■□□□□ 0.26
PPARGC1B-202ENST00000360453 PNPLA6Q8IY17 1366 aa16.68■□□□□ 0.26
PPARGC1B-202ENST00000360453 IL13P35225 146 aa16.68■□□□□ 0.26
PPARGC1B-202ENST00000360453 HECW2Q9P2P5 1572 aa16.67■□□□□ 0.26
PPARGC1B-202ENST00000360453 MYO5BQ9ULV0 1848 aa16.67■□□□□ 0.26
PPARGC1B-202ENST00000360453 BAG4O95429 457 aaKnown RBP16.67■□□□□ 0.26
PPARGC1B-202ENST00000360453 FOXD4L6Q3SYB3 417 aaPredicted RBP16.67■□□□□ 0.26
PPARGC1B-202ENST00000360453 CAVIN1Q6NZI2 390 aaKnown RBP16.67■□□□□ 0.26
PPARGC1B-202ENST00000360453 FOXD4L3Q6VB84 417 aaPredicted RBP16.67■□□□□ 0.26
PPARGC1B-202ENST00000360453 SLC52A1Q9NWF4 448 aa16.67■□□□□ 0.26
PPARGC1B-202ENST00000360453 FAM135BQ49AJ0 1406 aa16.67■□□□□ 0.26
PPARGC1B-202ENST00000360453 SLC4A10Q6U841 1118 aa16.66■□□□□ 0.26
PPARGC1B-202ENST00000360453 RBM27Q9P2N5 1060 aaKnown RBP16.66■□□□□ 0.26
PPARGC1B-202ENST00000360453 PIK3C2BO00750 1634 aa16.65■□□□□ 0.26
PPARGC1B-202ENST00000360453 ABCC4O15439 1325 aa16.65■□□□□ 0.26
PPARGC1B-202ENST00000360453 ZBTB7CA1YPR0 619 aa16.65■□□□□ 0.26
PPARGC1B-202ENST00000360453 IFT57Q9NWB7 429 aa16.65■□□□□ 0.26
PPARGC1B-202ENST00000360453 MLH3Q9UHC1 1453 aa16.65■□□□□ 0.26
PPARGC1B-202ENST00000360453 MEIS3Q99687 375 aa16.65■□□□□ 0.26
PPARGC1B-202ENST00000360453 F6X3S4 739 aa16.64■□□□□ 0.26
PPARGC1B-202ENST00000360453 SULT6B1Q6IMI4 303 aa16.64■□□□□ 0.26
PPARGC1B-202ENST00000360453 NASPP49321 788 aaPredicted RBP16.64■□□□□ 0.25
PPARGC1B-202ENST00000360453 CFAP44Q96MT7 982 aa16.64■□□□□ 0.25
PPARGC1B-202ENST00000360453 SDSP20132 328 aa16.64■□□□□ 0.25
PPARGC1B-202ENST00000360453 NECTIN2Q92692 538 aa16.64■□□□□ 0.25
PPARGC1B-202ENST00000360453 CIZ1Q9ULV3 898 aaPredicted RBP16.64■□□□□ 0.25
PPARGC1B-202ENST00000360453 ZNF853P0CG23 659 aa16.63■□□□□ 0.25
PPARGC1B-202ENST00000360453 TTC22Q5TAA0 569 aa16.63■□□□□ 0.25
PPARGC1B-202ENST00000360453 MED14O60244 1454 aa16.62■□□□□ 0.25
PPARGC1B-202ENST00000360453 CFAP74Q9C0B2 1584 aa16.62■□□□□ 0.25
PPARGC1B-202ENST00000360453 GOLGA6L22H0YM25 854 aa16.62■□□□□ 0.25
PPARGC1B-202ENST00000360453 PRPF40AO75400 957 aaKnown RBP16.62■□□□□ 0.25
PPARGC1B-202ENST00000360453 ARHGAP45Q92619 1136 aa16.62■□□□□ 0.25
PPARGC1B-202ENST00000360453 COG3Q96JB2 828 aa16.62■□□□□ 0.25
PPARGC1B-202ENST00000360453 USP26Q9BXU7 913 aa16.62■□□□□ 0.25
PPARGC1B-202ENST00000360453 API5Q9BZZ5 524 aaKnown RBP16.62■□□□□ 0.25
PPARGC1B-202ENST00000360453 FOXO3O43524 673 aa16.61■□□□□ 0.25
PPARGC1B-202ENST00000360453 DCTPP1Q9H773 170 aa16.61■□□□□ 0.25
PPARGC1B-202ENST00000360453 MAP2P11137 1827 aaKnown RBP16.6■□□□□ 0.25
PPARGC1B-202ENST00000360453 PTCH1Q13635 1447 aa16.6■□□□□ 0.25
PPARGC1B-202ENST00000360453 DTNBO60941 627 aa16.6■□□□□ 0.25
PPARGC1B-202ENST00000360453 CALD1Q05682 793 aaKnown RBP16.6■□□□□ 0.25
PPARGC1B-202ENST00000360453 ARHGEF40Q8TER5 1519 aa16.59■□□□□ 0.25
PPARGC1B-202ENST00000360453 SKOR2Q2VWA4 1001 aaPredicted RBP16.59■□□□□ 0.25
PPARGC1B-202ENST00000360453 G2E3Q7L622 706 aa16.59■□□□□ 0.25
PPARGC1B-202ENST00000360453 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
PPARGC1B-202ENST00000360453 CEP85Q6P2H3 762 aa16.59■□□□□ 0.25
PPARGC1B-202ENST00000360453 NUDT16Q96DE0 195 aaKnown RBP16.59■□□□□ 0.25
PPARGC1B-202ENST00000360453 MSH6P52701 1360 aa16.59■□□□□ 0.25
PPARGC1B-202ENST00000360453 BRPF1P55201 1214 aaPredicted RBP16.59■□□□□ 0.25
PPARGC1B-202ENST00000360453 NSFL1CQ9UNZ2 370 aaKnown RBP16.59■□□□□ 0.25
PPARGC1B-202ENST00000360453 EXOC6BQ9Y2D4 811 aa16.59■□□□□ 0.25
PPARGC1B-202ENST00000360453 RIMS2Q9UQ26 1411 aa16.58■□□□□ 0.25
PPARGC1B-202ENST00000360453 HSP90AA2PQ14568 343 aaPredicted RBP16.58■□□□□ 0.24
PPARGC1B-202ENST00000360453 MPNDQ8N594 471 aa16.58■□□□□ 0.24
PPARGC1B-202ENST00000360453 ZNF428Q96B54 188 aa16.58■□□□□ 0.24
PPARGC1B-202ENST00000360453 HSP90AB2PQ58FF8 381 aa16.58■□□□□ 0.24
PPARGC1B-202ENST00000360453 ZFYVE9O95405 1425 aa16.57■□□□□ 0.24
PPARGC1B-202ENST00000360453 WASLO00401 505 aaPredicted RBP16.57■□□□□ 0.24
PPARGC1B-202ENST00000360453 RABEP1Q15276 862 aa16.57■□□□□ 0.24
PPARGC1B-202ENST00000360453 RNF214Q8ND24 703 aa16.57■□□□□ 0.24
PPARGC1B-202ENST00000360453 CHMP4BQ9H444 224 aaKnown RBP16.57■□□□□ 0.24
PPARGC1B-202ENST00000360453 PRIM1P49642 420 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms