RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 ZNF622Q969S3 477 aaKnown RBP eCLIP8.66□□□□□ -1.02
RAB5B-201ENST00000360299 NAP1L2Q9ULW6 460 aaPredicted RBP8.66□□□□□ -1.02
RAB5B-201ENST00000360299 RAD21O60216 631 aa8.66□□□□□ -1.02
RAB5B-201ENST00000360299 PLIN1O60240 522 aa8.66□□□□□ -1.02
RAB5B-201ENST00000360299 NOL10Q9BSC4 688 aaKnown RBP8.66□□□□□ -1.02
RAB5B-201ENST00000360299 TSHZ2Q9NRE2 1034 aa8.66□□□□□ -1.02
RAB5B-201ENST00000360299 AFF2P51816 1311 aa8.66□□□□□ -1.02
RAB5B-201ENST00000360299 PTMAP06454 111 aaKnown RBP8.66□□□□□ -1.02
RAB5B-201ENST00000360299 PDE3AQ14432 1141 aa8.66□□□□□ -1.02
RAB5B-201ENST00000360299 L1TD1Q5T7N2 865 aaKnown RBP8.66□□□□□ -1.02
RAB5B-201ENST00000360299 MYO5CQ9NQX4 1742 aa8.65□□□□□ -1.02
RAB5B-201ENST00000360299 ARHGEF12Q9NZN5 1544 aa8.65□□□□□ -1.02
RAB5B-201ENST00000360299 NINLQ9Y2I6 1382 aa8.65□□□□□ -1.02
RAB5B-201ENST00000360299 ST18O60284 1047 aa8.65□□□□□ -1.02
RAB5B-201ENST00000360299 MYL6BP14649 208 aa8.65□□□□□ -1.02
RAB5B-201ENST00000360299 MFAP1P55081 439 aaKnown RBP8.65□□□□□ -1.02
RAB5B-201ENST00000360299 ANKRD45Q5TZF3 282 aa8.65□□□□□ -1.02
RAB5B-201ENST00000360299 SCAF11Q99590 1463 aaKnown RBP8.65□□□□□ -1.02
RAB5B-201ENST00000360299 NRDCO43847 1150 aa8.65□□□□□ -1.03
RAB5B-201ENST00000360299 ZCRB1Q8TBF4 217 aaKnown RBP8.65□□□□□ -1.03
RAB5B-201ENST00000360299 FCHSD2O94868 740 aa8.64□□□□□ -1.03
RAB5B-201ENST00000360299 CFAP65Q6ZU64 1925 aaKnown RBP8.64□□□□□ -1.03
RAB5B-201ENST00000360299 GOLGA6L6A8MZA4 724 aa8.64□□□□□ -1.03
RAB5B-201ENST00000360299 IL2RBP14784 551 aa8.64□□□□□ -1.03
RAB5B-201ENST00000360299 PDE4AP27815 886 aa8.64□□□□□ -1.03
RAB5B-201ENST00000360299 PRKAR2BP31323 418 aa8.64□□□□□ -1.03
RAB5B-201ENST00000360299 CLEC11AQ9Y240 323 aa8.64□□□□□ -1.03
RAB5B-201ENST00000360299 FKBP5Q13451 457 aaPredicted RBP8.64□□□□□ -1.03
RAB5B-201ENST00000360299 FAM182BQ5T319 152 aa8.64□□□□□ -1.03
RAB5B-201ENST00000360299 KIF3AQ9Y496 699 aa8.64□□□□□ -1.03
RAB5B-201ENST00000360299 RUFY2Q8WXA3 655 aa8.63□□□□□ -1.03
RAB5B-201ENST00000360299 ATP6V1AP38606 617 aa8.63□□□□□ -1.03
RAB5B-201ENST00000360299 SAMD1Q6SPF0 538 aaPredicted RBP8.63□□□□□ -1.03
RAB5B-201ENST00000360299 KRT27Q7Z3Y8 459 aa8.63□□□□□ -1.03
RAB5B-201ENST00000360299 HECW2Q9P2P5 1572 aa8.63□□□□□ -1.03
RAB5B-201ENST00000360299 GCP02774 474 aa8.63□□□□□ -1.03
RAB5B-201ENST00000360299 HSP90B1P14625 803 aaKnown RBP8.63□□□□□ -1.03
RAB5B-201ENST00000360299 ZNF652Q9Y2D9 606 aa8.63□□□□□ -1.03
RAB5B-201ENST00000360299 TRIM37O94972 964 aa8.63□□□□□ -1.03
RAB5B-201ENST00000360299 REC8O95072 547 aa8.63□□□□□ -1.03
RAB5B-201ENST00000360299 CCDC30Q5VVM6 783 aa8.63□□□□□ -1.03
RAB5B-201ENST00000360299 NSD2O96028 1365 aa8.63□□□□□ -1.03
RAB5B-201ENST00000360299 BTBD11A6QL63 1104 aa8.62□□□□□ -1.03
RAB5B-201ENST00000360299 PLA2R1Q13018 1463 aa8.62□□□□□ -1.03
RAB5B-201ENST00000360299 RALGAPBQ86X10 1494 aa8.62□□□□□ -1.03
RAB5B-201ENST00000360299 CSPP1Q1MSJ5 1256 aa8.62□□□□□ -1.03
RAB5B-201ENST00000360299 CTDP1Q9Y5B0 961 aaPredicted RBP8.62□□□□□ -1.03
RAB5B-201ENST00000360299 ARHGEF10O15013 1369 aa8.62□□□□□ -1.03
RAB5B-201ENST00000360299 GNAI3P08754 354 aa8.62□□□□□ -1.03
RAB5B-201ENST00000360299 SYAP1Q96A49 352 aaPredicted RBP8.62□□□□□ -1.03
RAB5B-201ENST00000360299 KAT6BQ8WYB5 2073 aa8.62□□□□□ -1.03
RAB5B-201ENST00000360299 MLH3Q9UHC1 1453 aa8.62□□□□□ -1.03
RAB5B-201ENST00000360299 RBM5P52756 815 aaKnown RBP eCLIP8.61□□□□□ -1.03
RAB5B-201ENST00000360299 PUS7Q96PZ0 661 aaKnown RBP8.61□□□□□ -1.03
RAB5B-201ENST00000360299 NSD3Q9BZ95 1437 aa8.61□□□□□ -1.03
RAB5B-201ENST00000360299 MAST1Q9Y2H9 1570 aa8.61□□□□□ -1.03
RAB5B-201ENST00000360299 TTLL12Q14166 644 aaPredicted RBP8.61□□□□□ -1.03
RAB5B-201ENST00000360299 SMARCC1Q92922 1105 aaPredicted RBP8.61□□□□□ -1.03
RAB5B-201ENST00000360299 PARP3Q9Y6F1 533 aa8.61□□□□□ -1.03
RAB5B-201ENST00000360299 PPIP5K1Q6PFW1 1433 aa8.61□□□□□ -1.03
RAB5B-201ENST00000360299 UNC13BO14795 1591 aa8.61□□□□□ -1.03
RAB5B-201ENST00000360299 RBM6P78332 1123 aaKnown RBP8.61□□□□□ -1.03
RAB5B-201ENST00000360299 IFNL2Q8IZJ0 200 aa8.61□□□□□ -1.03
RAB5B-201ENST00000360299 CCNL1Q9UK58 526 aaPredicted RBP8.61□□□□□ -1.03
RAB5B-201ENST00000360299 EMILIN1Q9Y6C2 1016 aa8.61□□□□□ -1.03
RAB5B-201ENST00000360299 NLRP1Q9C000 1473 aa8.61□□□□□ -1.03
RAB5B-201ENST00000360299 CCAR1Q8IX12 1150 aaKnown RBP8.61□□□□□ -1.03
RAB5B-201ENST00000360299 SEPT12Q8IYM1 358 aa8.6□□□□□ -1.03
RAB5B-201ENST00000360299 RPGRQ92834 1020 aaKnown RBP8.6□□□□□ -1.03
RAB5B-201ENST00000360299 GNL2Q13823 731 aaKnown RBP8.6□□□□□ -1.03
RAB5B-201ENST00000360299 CCDC34Q96HJ3 373 aa8.6□□□□□ -1.03
RAB5B-201ENST00000360299 CDCA7Q9BWT1 371 aaPredicted RBP8.6□□□□□ -1.03
RAB5B-201ENST00000360299 TOMM22Q9NS69 142 aa8.6□□□□□ -1.03
RAB5B-201ENST00000360299 TTC21BQ7Z4L5 1316 aa8.6□□□□□ -1.03
RAB5B-201ENST00000360299 G3BP1Q13283 466 aaKnown RBP eCLIP8.6□□□□□ -1.03
RAB5B-201ENST00000360299 AMOTQ4VCS5 1084 aa8.6□□□□□ -1.03
RAB5B-201ENST00000360299 ABCC11Q96J66 1382 aa8.59□□□□□ -1.03
RAB5B-201ENST00000360299 WWC1Q8IX03 1113 aa8.59□□□□□ -1.03
RAB5B-201ENST00000360299 TWISTNBQ3B726 338 aaPredicted RBP8.59□□□□□ -1.03
RAB5B-201ENST00000360299 EFCAB6Q5THR3 1501 aa8.59□□□□□ -1.03
RAB5B-201ENST00000360299 ERC2O15083 957 aa8.59□□□□□ -1.03
RAB5B-201ENST00000360299 IFIT2P09913 472 aaKnown RBP8.59□□□□□ -1.03
RAB5B-201ENST00000360299 EXOSC9Q06265 439 aaKnown RBP8.59□□□□□ -1.03
RAB5B-201ENST00000360299 TTC21AQ8NDW8 1320 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 PLXNC1O60486 1568 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 CDCA7LQ96GN5 454 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 TRPM1Q7Z4N2 1603 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 PSDA5PKW4 1024 aaPredicted RBP8.58□□□□□ -1.04
RAB5B-201ENST00000360299 BRINP3Q76B58 766 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 DIAPH3Q9NSV4 1193 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 RTCBQ9Y3I0 505 aaKnown RBP8.58□□□□□ -1.04
RAB5B-201ENST00000360299 FANCIQ9NVI1 1328 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 MSL1Q68DK7 614 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 FAM196AQ6ZSG2 479 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 RILPL2Q969X0 211 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 SLKQ9H2G2 1235 aaPredicted RBP8.58□□□□□ -1.04
RAB5B-201ENST00000360299 GNPATO15228 680 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 UBTFL1P0CB47 393 aaPredicted RBP8.58□□□□□ -1.04
RAB5B-201ENST00000360299 FBLN1P23142 703 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 UNC5CLQ8IV45 518 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms