RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 SOGA3Q5TF21 947 aa15.08■□□□□ 0
LDLRAD4-201ENST00000359446 CYP46A1Q9Y6A2 500 aa15.08■□□□□ 0
LDLRAD4-201ENST00000359446 CCDC7Q96M83 1385 aa15.08■□□□□ 0
LDLRAD4-201ENST00000359446 TWISTNBQ3B726 338 aaPredicted RBP15.07■□□□□ 0
LDLRAD4-201ENST00000359446 ZSCAN29Q8IWY8 852 aaPredicted RBP15.07■□□□□ 0
LDLRAD4-201ENST00000359446 SEPT11Q9NVA2 429 aaKnown RBP15.07■□□□□ 0
LDLRAD4-201ENST00000359446 MPHOSPH10O00566 681 aaKnown RBP15.07■□□□□ 0
LDLRAD4-201ENST00000359446 CENPHQ9H3R5 247 aa15.07■□□□□ 0
LDLRAD4-201ENST00000359446 DACH1Q9UI36 760 aa15.07■□□□□ 0
LDLRAD4-201ENST00000359446 MAP4K4O95819 1239 aaPredicted RBP15.07■□□□□ 0
LDLRAD4-201ENST00000359446 NOB1Q9ULX3 412 aaKnown RBP15.07■□□□□ 0
LDLRAD4-201ENST00000359446 ADAMTS8Q9UP79 889 aa15.07■□□□□ 0
LDLRAD4-201ENST00000359446 MTERF4Q7Z6M4 381 aaKnown RBP15.06■□□□□ 0
LDLRAD4-201ENST00000359446 TXLNBQ8N3L3 684 aa15.06■□□□□ 0
LDLRAD4-201ENST00000359446 RABEP1Q15276 862 aa15.06■□□□□ 0
LDLRAD4-201ENST00000359446 PROSER2Q86WR7 435 aaPredicted RBP15.06■□□□□ 0
LDLRAD4-201ENST00000359446 SLC4A2P04920 1241 aa15.06■□□□□ 0
LDLRAD4-201ENST00000359446 TNMDQ9H2S6 317 aa15.06■□□□□ 0
LDLRAD4-201ENST00000359446 TCP11L2Q8N4U5 519 aa15.06■□□□□ 0
LDLRAD4-201ENST00000359446 LRRCC1Q9C099 1032 aa15.06■□□□□ 0
LDLRAD4-201ENST00000359446 TXNDC2Q86VQ3 553 aa15.05■□□□□ 0
LDLRAD4-201ENST00000359446 STAC3Q96MF2 364 aa15.05■□□□□ 0
LDLRAD4-201ENST00000359446 CCDC192P0DO97 292 aa15.05■□□□□ 0
LDLRAD4-201ENST00000359446 DESP17661 470 aa15.05■□□□□ 0
LDLRAD4-201ENST00000359446 FAM177A1Q8N128 213 aaPredicted RBP15.05■□□□□ -0
LDLRAD4-201ENST00000359446 GBP2P32456 591 aaPredicted RBP15.05■□□□□ -0
LDLRAD4-201ENST00000359446 ZSCAN25Q6NSZ9 544 aa15.04■□□□□ -0
LDLRAD4-201ENST00000359446 SSBP05455 408 aaKnown RBP eCLIP15.04■□□□□ -0
LDLRAD4-201ENST00000359446 TDO2P48775 406 aa15.04■□□□□ -0
LDLRAD4-201ENST00000359446 BRD4O60885 1362 aaPredicted RBP15.04■□□□□ -0
LDLRAD4-201ENST00000359446 CCT4P50991 539 aaKnown RBP15.04■□□□□ -0
LDLRAD4-201ENST00000359446 IBSPP21815 317 aaPredicted RBP15.04■□□□□ -0
LDLRAD4-201ENST00000359446 ZNF76P36508 570 aa15.04■□□□□ -0
LDLRAD4-201ENST00000359446 TAX1BP1Q86VP1 789 aa15.04■□□□□ -0
LDLRAD4-201ENST00000359446 PRAM1Q96QH2 718 aa15.04■□□□□ -0
LDLRAD4-201ENST00000359446 GCC1Q96CN9 775 aa15.03■□□□□ -0
LDLRAD4-201ENST00000359446 NEBLO76041 1014 aa15.03■□□□□ -0
LDLRAD4-201ENST00000359446 AEBP1Q8IUX7 1158 aa15.03■□□□□ -0
LDLRAD4-201ENST00000359446 CCDC97Q96F63 343 aaPredicted RBP15.03■□□□□ -0
LDLRAD4-201ENST00000359446 NOL7Q9UMY1 257 aaKnown RBP15.03■□□□□ -0
LDLRAD4-201ENST00000359446 ZNF644Q9H582 1327 aaPredicted RBP15.03■□□□□ -0
LDLRAD4-201ENST00000359446 BMP2KQ9NSY1 1161 aaPredicted RBP15.02■□□□□ -0
LDLRAD4-201ENST00000359446 SULT6B1Q6IMI4 303 aa15.02■□□□□ -0
LDLRAD4-201ENST00000359446 SPG7Q9UQ90 795 aa15.02■□□□□ -0
LDLRAD4-201ENST00000359446 ANKRD50Q9ULJ7 1429 aa15.02■□□□□ -0
LDLRAD4-201ENST00000359446 CCDC66A2RUB6 948 aa15.02■□□□□ -0
LDLRAD4-201ENST00000359446 CDKL5O76039 1030 aa15.02■□□□□ -0
LDLRAD4-201ENST00000359446 EXOSC9Q06265 439 aaKnown RBP15.02■□□□□ -0
LDLRAD4-201ENST00000359446 SPINK5Q9NQ38 1064 aaPredicted RBP15.02■□□□□ -0
LDLRAD4-201ENST00000359446 TRIM21P19474 475 aaKnown RBP15.02□□□□□ -0.01
LDLRAD4-201ENST00000359446 UBAC1Q9BSL1 405 aa15.02□□□□□ -0.01
LDLRAD4-201ENST00000359446 FGD6Q6ZV73 1430 aa15.02□□□□□ -0.01
LDLRAD4-201ENST00000359446 KIAA0754O94854 1291 aa15.02□□□□□ -0.01
LDLRAD4-201ENST00000359446 EZRP15311 586 aaKnown RBP15.02□□□□□ -0.01
LDLRAD4-201ENST00000359446 RUSC2Q8N2Y8 1516 aa15.01□□□□□ -0.01
LDLRAD4-201ENST00000359446 KRT85P78386 507 aa15.01□□□□□ -0.01
LDLRAD4-201ENST00000359446 PIBF1Q8WXW3 757 aa15.01□□□□□ -0.01
LDLRAD4-201ENST00000359446 GOLGA6L7A0A1B0GV03 622 aa15.01□□□□□ -0.01
LDLRAD4-201ENST00000359446 LRRFIP2Q9Y608 721 aaKnown RBP15.01□□□□□ -0.01
LDLRAD4-201ENST00000359446 DHX8Q14562 1220 aaKnown RBP15.01□□□□□ -0.01
LDLRAD4-201ENST00000359446 LARP1BQ659C4 914 aaKnown RBP15.01□□□□□ -0.01
LDLRAD4-201ENST00000359446 AACSQ86V21 672 aa15□□□□□ -0.01
LDLRAD4-201ENST00000359446 SSR1P43307 286 aaKnown RBP15□□□□□ -0.01
LDLRAD4-201ENST00000359446 ZNF530Q6P9A1 599 aaPredicted RBP15□□□□□ -0.01
LDLRAD4-201ENST00000359446 USP5P45974 858 aa15□□□□□ -0.01
LDLRAD4-201ENST00000359446 HSP90AB3PQ58FF7 597 aa15□□□□□ -0.01
LDLRAD4-201ENST00000359446 TSR2Q969E8 191 aaKnown RBP15□□□□□ -0.01
LDLRAD4-201ENST00000359446 LRP2BPQ9P2M1 347 aa15□□□□□ -0.01
LDLRAD4-201ENST00000359446 PDZRN3Q9UPQ7 1066 aa15□□□□□ -0.01
LDLRAD4-201ENST00000359446 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
LDLRAD4-201ENST00000359446 WDR33Q9C0J8 1336 aaKnown RBP14.99□□□□□ -0.01
LDLRAD4-201ENST00000359446 BTBD11A6QL63 1104 aa14.99□□□□□ -0.01
LDLRAD4-201ENST00000359446 SCAPERQ9BY12 1400 aa14.99□□□□□ -0.01
LDLRAD4-201ENST00000359446 IQCEQ6IPM2 695 aa14.99□□□□□ -0.01
LDLRAD4-201ENST00000359446 FAM193AP78312 1265 aa14.99□□□□□ -0.01
LDLRAD4-201ENST00000359446 CEP57L1Q8IYX8 460 aa14.99□□□□□ -0.01
LDLRAD4-201ENST00000359446 CBFA2T2O43439 604 aa14.98□□□□□ -0.01
LDLRAD4-201ENST00000359446 CDK19Q9BWU1 502 aa14.98□□□□□ -0.01
LDLRAD4-201ENST00000359446 HMGN5P82970 282 aaKnown RBP14.98□□□□□ -0.01
LDLRAD4-201ENST00000359446 CFAP45Q9UL16 551 aa14.98□□□□□ -0.01
LDLRAD4-201ENST00000359446 PIP4K2BP78356 416 aa14.98□□□□□ -0.01
LDLRAD4-201ENST00000359446 BLOC1S2Q6QNY1 142 aa14.98□□□□□ -0.01
LDLRAD4-201ENST00000359446 PNISRQ8TF01 805 aaKnown RBP14.98□□□□□ -0.01
LDLRAD4-201ENST00000359446 RAI14Q9P0K7 980 aa14.98□□□□□ -0.01
LDLRAD4-201ENST00000359446 CWC27Q6UX04 472 aaKnown RBP14.98□□□□□ -0.01
LDLRAD4-201ENST00000359446 CDCA7LQ96GN5 454 aa14.98□□□□□ -0.01
LDLRAD4-201ENST00000359446 SRCIN1Q9C0H9 1055 aa14.98□□□□□ -0.01
LDLRAD4-201ENST00000359446 DHX37Q8IY37 1157 aaKnown RBP14.97□□□□□ -0.01
LDLRAD4-201ENST00000359446 CFAP70Q5T0N1 1121 aa14.97□□□□□ -0.01
LDLRAD4-201ENST00000359446 KIAA1328Q86T90 577 aa14.97□□□□□ -0.01
LDLRAD4-201ENST00000359446 SUPT6HQ7KZ85 1726 aaKnown RBP14.97□□□□□ -0.01
LDLRAD4-201ENST00000359446 PPP2R1AP30153 589 aa14.97□□□□□ -0.01
LDLRAD4-201ENST00000359446 KIF21BO75037 1637 aa14.97□□□□□ -0.01
LDLRAD4-201ENST00000359446 SRGAP3O43295 1099 aa14.96□□□□□ -0.01
LDLRAD4-201ENST00000359446 SPATA32Q96LK8 384 aa14.96□□□□□ -0.01
LDLRAD4-201ENST00000359446 EIF3JO75822 258 aaKnown RBP14.96□□□□□ -0.01
LDLRAD4-201ENST00000359446 BICDL1Q6ZP65 573 aa14.96□□□□□ -0.01
LDLRAD4-201ENST00000359446 CTNNA3Q9UI47 895 aa14.96□□□□□ -0.02
LDLRAD4-201ENST00000359446 IGHMBP2P38935 993 aaKnown RBP14.95□□□□□ -0.02
LDLRAD4-201ENST00000359446 SEC63Q9UGP8 760 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms