RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 POTEAQ6S8J7 498 aa19.21■□□□□ 0.67
GABPB1-202ENST00000359031 USP54Q70EL1 1684 aa19.21■□□□□ 0.67
GABPB1-202ENST00000359031 PROSER2Q86WR7 435 aaPredicted RBP19.21■□□□□ 0.67
GABPB1-202ENST00000359031 TTC21AQ8NDW8 1320 aa19.21■□□□□ 0.67
GABPB1-202ENST00000359031 DLG5Q8TDM6 1919 aa19.2■□□□□ 0.66
GABPB1-202ENST00000359031 USP31Q70CQ4 1352 aa19.2■□□□□ 0.66
GABPB1-202ENST00000359031 FBLN1P23142 703 aa19.2■□□□□ 0.66
GABPB1-202ENST00000359031 ROBO1Q9Y6N7 1651 aa19.2■□□□□ 0.66
GABPB1-202ENST00000359031 NFE2L2Q16236 605 aa19.19■□□□□ 0.66
GABPB1-202ENST00000359031 RBM33Q96EV2 1170 aaKnown RBP19.19■□□□□ 0.66
GABPB1-202ENST00000359031 RGPD1P0DJD0 1748 aa19.19■□□□□ 0.66
GABPB1-202ENST00000359031 PEAK1Q9H792 1746 aa19.19■□□□□ 0.66
GABPB1-202ENST00000359031 KCNA6P17658 529 aa19.18■□□□□ 0.66
GABPB1-202ENST00000359031 CALD1Q05682 793 aaKnown RBP19.18■□□□□ 0.66
GABPB1-202ENST00000359031 PIK3C2AO00443 1686 aa19.17■□□□□ 0.66
GABPB1-202ENST00000359031 FRAT1Q92837 279 aaPredicted RBP19.17■□□□□ 0.66
GABPB1-202ENST00000359031 TSR2Q969E8 191 aaKnown RBP19.17■□□□□ 0.66
GABPB1-202ENST00000359031 CLUAP1Q96AJ1 413 aa19.17■□□□□ 0.66
GABPB1-202ENST00000359031 EXOSC9Q06265 439 aaKnown RBP19.16■□□□□ 0.66
GABPB1-202ENST00000359031 RRS1Q15050 365 aaKnown RBP19.16■□□□□ 0.66
GABPB1-202ENST00000359031 PANK1Q8TE04 598 aa19.16■□□□□ 0.66
GABPB1-202ENST00000359031 COG6Q9Y2V7 657 aa19.15■□□□□ 0.66
GABPB1-202ENST00000359031 MSH6P52701 1360 aa19.15■□□□□ 0.66
GABPB1-202ENST00000359031 MSH5O43196 834 aa19.14■□□□□ 0.66
GABPB1-202ENST00000359031 HMOX1P09601 288 aa19.14■□□□□ 0.66
GABPB1-202ENST00000359031 LMOD3Q0VAK6 560 aa19.14■□□□□ 0.66
GABPB1-202ENST00000359031 PDE4AP27815 886 aa19.14■□□□□ 0.65
GABPB1-202ENST00000359031 ZKSCAN2Q63HK3 967 aa19.14■□□□□ 0.65
GABPB1-202ENST00000359031 NUTM2FA1L443 756 aa19.13■□□□□ 0.65
GABPB1-202ENST00000359031 ANP32AP39687 249 aaKnown RBP19.13■□□□□ 0.65
GABPB1-202ENST00000359031 BACH2Q9BYV9 841 aa19.13■□□□□ 0.65
GABPB1-202ENST00000359031 PHACTR3Q96KR7 559 aa19.12■□□□□ 0.65
GABPB1-202ENST00000359031 ANP32EQ9BTT0 268 aa19.12■□□□□ 0.65
GABPB1-202ENST00000359031 BCL2L13Q9BXK5 485 aa19.12■□□□□ 0.65
GABPB1-202ENST00000359031 SMC4Q9NTJ3 1288 aa19.12■□□□□ 0.65
GABPB1-202ENST00000359031 MARF1Q9Y4F3 1742 aaKnown RBP19.12■□□□□ 0.65
GABPB1-202ENST00000359031 ZNF428Q96B54 188 aa19.11■□□□□ 0.65
GABPB1-202ENST00000359031 VIRMAQ69YN4 1812 aaKnown RBP19.1■□□□□ 0.65
GABPB1-202ENST00000359031 KIF16BQ96L93 1317 aa19.1■□□□□ 0.65
GABPB1-202ENST00000359031 RLBP1P12271 317 aa19.1■□□□□ 0.65
GABPB1-202ENST00000359031 ALDH1L2Q3SY69 923 aa19.1■□□□□ 0.65
GABPB1-202ENST00000359031 NGDNQ8NEJ9 315 aaKnown RBP19.1■□□□□ 0.65
GABPB1-202ENST00000359031 IFT57Q9NWB7 429 aa19.1■□□□□ 0.65
GABPB1-202ENST00000359031 NWD1Q149M9 1564 aa19.09■□□□□ 0.65
GABPB1-202ENST00000359031 PHLPP1O60346 1717 aa19.09■□□□□ 0.65
GABPB1-202ENST00000359031 JCADQ9P266 1359 aa19.09■□□□□ 0.65
GABPB1-202ENST00000359031 EIF4A2Q14240 407 aaKnown RBP19.09■□□□□ 0.65
GABPB1-202ENST00000359031 MVPQ14764 893 aaKnown RBP19.09■□□□□ 0.65
GABPB1-202ENST00000359031 PMFBP1Q8TBY8 1022 aa19.09■□□□□ 0.65
GABPB1-202ENST00000359031 SBNO1A3KN83 1393 aa19.08■□□□□ 0.65
GABPB1-202ENST00000359031 ARHGEF10O15013 1369 aa19.08■□□□□ 0.65
GABPB1-202ENST00000359031 GNAI1P63096 354 aa19.08■□□□□ 0.65
GABPB1-202ENST00000359031 FTSJ3Q8IY81 847 aaKnown RBP19.08■□□□□ 0.65
GABPB1-202ENST00000359031 DZIP1LQ8IYY4 767 aaKnown RBP19.08■□□□□ 0.65
GABPB1-202ENST00000359031 SSH1Q8WYL5 1049 aa19.08■□□□□ 0.65
GABPB1-202ENST00000359031 SLAIN2Q9P270 581 aa19.08■□□□□ 0.65
GABPB1-202ENST00000359031 MYT1Q01538 1121 aa19.07■□□□□ 0.64
GABPB1-202ENST00000359031 FLT4P35916 1363 aa19.07■□□□□ 0.64
GABPB1-202ENST00000359031 TNNQ9UQP3 1299 aa19.07■□□□□ 0.64
GABPB1-202ENST00000359031 ZNF853P0CG23 659 aa19.06■□□□□ 0.64
GABPB1-202ENST00000359031 MEX3CQ5U5Q3 659 aaKnown RBP19.06■□□□□ 0.64
GABPB1-202ENST00000359031 ERICH6Q7L0X2 663 aa19.06■□□□□ 0.64
GABPB1-202ENST00000359031 C14orf37Q86TY3 774 aa19.06■□□□□ 0.64
GABPB1-202ENST00000359031 KIF24Q5T7B8 1368 aa19.05■□□□□ 0.64
GABPB1-202ENST00000359031 IGHDP01880 384 aa19.05■□□□□ 0.64
GABPB1-202ENST00000359031 BRPF1P55201 1214 aaPredicted RBP19.05■□□□□ 0.64
GABPB1-202ENST00000359031 ATF7IPQ6VMQ6 1270 aa19.05■□□□□ 0.64
GABPB1-202ENST00000359031 SKAP1Q86WV1 359 aa19.05■□□□□ 0.64
GABPB1-202ENST00000359031 ADGRL3Q9HAR2 1447 aa19.05■□□□□ 0.64
GABPB1-202ENST00000359031 IPO8O15397 1037 aaKnown RBP19.04■□□□□ 0.64
GABPB1-202ENST00000359031 TRIM27P14373 513 aa19.03■□□□□ 0.64
GABPB1-202ENST00000359031 MAP3K19Q56UN5 1328 aa19.03■□□□□ 0.64
GABPB1-202ENST00000359031 SULT6B1Q6IMI4 303 aa19.03■□□□□ 0.64
GABPB1-202ENST00000359031 IPO9Q96P70 1041 aaKnown RBP19.03■□□□□ 0.64
GABPB1-202ENST00000359031 FAM161AQ3B820 660 aa19.02■□□□□ 0.64
GABPB1-202ENST00000359031 CFAP44Q96MT7 982 aa19.02■□□□□ 0.64
GABPB1-202ENST00000359031 DDX19BQ9UMR2 479 aa19.02■□□□□ 0.64
GABPB1-202ENST00000359031 HSP90AB2PQ58FF8 381 aa19.01■□□□□ 0.63
GABPB1-202ENST00000359031 THUMPD2Q9BTF0 503 aaKnown RBP19.01■□□□□ 0.63
GABPB1-202ENST00000359031 NOB1Q9ULX3 412 aaKnown RBP19.01■□□□□ 0.63
GABPB1-202ENST00000359031 LAS1LQ9Y4W2 734 aaKnown RBP19.01■□□□□ 0.63
GABPB1-202ENST00000359031 KDRP35968 1356 aa19■□□□□ 0.63
GABPB1-202ENST00000359031 AEBP1Q8IUX7 1158 aa19■□□□□ 0.63
GABPB1-202ENST00000359031 RWDD1Q9H446 243 aaPredicted RBP19■□□□□ 0.63
GABPB1-202ENST00000359031 MBIPQ9NS73 344 aa19■□□□□ 0.63
GABPB1-202ENST00000359031 NOP58Q9Y2X3 529 aaKnown RBP19■□□□□ 0.63
GABPB1-202ENST00000359031 PCDHB15Q9Y5E8 787 aa19■□□□□ 0.63
GABPB1-202ENST00000359031 COL16A1Q07092 1604 aaPredicted RBP18.99■□□□□ 0.63
GABPB1-202ENST00000359031 SPATA31A6Q5VVP1 1343 aa18.99■□□□□ 0.63
GABPB1-202ENST00000359031 ZNF772Q68DY9 489 aaPredicted RBP18.99■□□□□ 0.63
GABPB1-202ENST00000359031 LTN1O94822 1766 aa18.98■□□□□ 0.63
GABPB1-202ENST00000359031 RTL1A6NKG5 1358 aa18.98■□□□□ 0.63
GABPB1-202ENST00000359031 VAMP4O75379 141 aa18.98■□□□□ 0.63
GABPB1-202ENST00000359031 RGS3P49796 1198 aa18.98■□□□□ 0.63
GABPB1-202ENST00000359031 LRP6O75581 1613 aa18.97■□□□□ 0.63
GABPB1-202ENST00000359031 ARHGAP45Q92619 1136 aa18.97■□□□□ 0.63
GABPB1-202ENST00000359031 IGSF1Q8N6C5 1336 aa18.97■□□□□ 0.63
GABPB1-202ENST00000359031 NLRP6P59044 892 aa18.96■□□□□ 0.63
GABPB1-202ENST00000359031 C8orf34Q49A92 452 aa18.96■□□□□ 0.63
GABPB1-202ENST00000359031 ITPRIPQ8IWB1 547 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms