RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 MYO3AQ8NEV4 1616 aa5.42□□□□□ -1.54
CNGA1-201ENST00000358519 ABCA6Q8N139 1617 aa5.41□□□□□ -1.54
CNGA1-201ENST00000358519 GGCXP38435 758 aa5.41□□□□□ -1.54
CNGA1-201ENST00000358519 DDX10Q13206 875 aaKnown RBP5.41□□□□□ -1.54
CNGA1-201ENST00000358519 A2MP01023 1474 aa5.41□□□□□ -1.54
CNGA1-201ENST00000358519 RALGAPBQ86X10 1494 aa5.41□□□□□ -1.54
CNGA1-201ENST00000358519 RGS17Q9UGC6 210 aaPredicted RBP5.41□□□□□ -1.54
CNGA1-201ENST00000358519 TRPM1Q7Z4N2 1603 aa5.4□□□□□ -1.54
CNGA1-201ENST00000358519 C11orf95C9JLR9 678 aaPredicted RBP5.4□□□□□ -1.54
CNGA1-201ENST00000358519 COL9A1P20849 921 aa5.4□□□□□ -1.54
CNGA1-201ENST00000358519 PPP4CP60510 307 aa5.4□□□□□ -1.54
CNGA1-201ENST00000358519 PODXL2Q9NZ53 605 aa5.4□□□□□ -1.54
CNGA1-201ENST00000358519 SYNMO15061 1565 aa5.4□□□□□ -1.55
CNGA1-201ENST00000358519 WASHC2AQ641Q2 1341 aa5.4□□□□□ -1.55
CNGA1-201ENST00000358519 PPP4R2Q9NY27 417 aa5.4□□□□□ -1.55
CNGA1-201ENST00000358519 KTN1Q86UP2 1357 aaKnown RBP5.4□□□□□ -1.55
CNGA1-201ENST00000358519 ZFYVE9O95405 1425 aa5.39□□□□□ -1.55
CNGA1-201ENST00000358519 EVI5O60447 810 aa5.39□□□□□ -1.55
CNGA1-201ENST00000358519 IPO9Q96P70 1041 aaKnown RBP5.39□□□□□ -1.55
CNGA1-201ENST00000358519 DAXXQ9UER7 740 aaPredicted RBP5.39□□□□□ -1.55
CNGA1-201ENST00000358519 TONSLQ96HA7 1378 aa5.39□□□□□ -1.55
CNGA1-201ENST00000358519 ROCK2O75116 1388 aaKnown RBP5.39□□□□□ -1.55
CNGA1-201ENST00000358519 ZMYM3Q14202 1370 aa5.39□□□□□ -1.55
CNGA1-201ENST00000358519 CCER2I3L3R5 266 aa5.39□□□□□ -1.55
CNGA1-201ENST00000358519 SUZ12Q15022 739 aaKnown RBP5.39□□□□□ -1.55
CNGA1-201ENST00000358519 POTEAQ6S8J7 498 aa5.39□□□□□ -1.55
CNGA1-201ENST00000358519 MTRQ99707 1265 aa5.39□□□□□ -1.55
CNGA1-201ENST00000358519 TMUB1Q9BVT8 246 aa5.39□□□□□ -1.55
CNGA1-201ENST00000358519 ATP1B4Q9UN42 357 aaPredicted RBP5.39□□□□□ -1.55
CNGA1-201ENST00000358519 RPGRIP1LQ68CZ1 1315 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 IQGAP1P46940 1657 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 ZNF142P52746 1687 aaPredicted RBP5.38□□□□□ -1.55
CNGA1-201ENST00000358519 TRIM67Q6ZTA4 783 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 PPLO60437 1756 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 CEP170BQ9Y4F5 1589 aaPredicted RBP5.38□□□□□ -1.55
CNGA1-201ENST00000358519 NRXN1Q9ULB1 1477 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 GPRASP1Q5JY77 1395 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 PRR20EP86478 221 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 PRR20CP86479 221 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 PRR20DP86480 221 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 PRR20BP86481 221 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 PRR20AP86496 221 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 AFAP1Q8N556 730 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 ADGRB3O60242 1522 aa5.38□□□□□ -1.55
CNGA1-201ENST00000358519 SPAG9O60271 1321 aaKnown RBP5.37□□□□□ -1.55
CNGA1-201ENST00000358519 WASHC2CQ9Y4E1 1318 aa5.37□□□□□ -1.55
CNGA1-201ENST00000358519 ANP32AP39687 249 aaKnown RBP5.37□□□□□ -1.55
CNGA1-201ENST00000358519 ANKLE2Q86XL3 938 aa5.37□□□□□ -1.55
CNGA1-201ENST00000358519 FBXW7Q969H0 707 aa5.37□□□□□ -1.55
CNGA1-201ENST00000358519 MPHOSPH9Q99550 1183 aa5.37□□□□□ -1.55
CNGA1-201ENST00000358519 ZMYND15Q9H091 742 aa5.37□□□□□ -1.55
CNGA1-201ENST00000358519 SEPT9Q9UHD8 586 aaPredicted RBP5.37□□□□□ -1.55
CNGA1-201ENST00000358519 BRPF3Q9ULD4 1205 aa5.37□□□□□ -1.55
CNGA1-201ENST00000358519 ABCC3O15438 1527 aa5.37□□□□□ -1.55
CNGA1-201ENST00000358519 PPP1R15AO75807 674 aaPredicted RBP5.37□□□□□ -1.55
CNGA1-201ENST00000358519 B4GALNT3Q6L9W6 998 aa5.37□□□□□ -1.55
CNGA1-201ENST00000358519 INSRP06213 1382 aa5.36□□□□□ -1.55
CNGA1-201ENST00000358519 KNDC1Q76NI1 1749 aa5.36□□□□□ -1.55
CNGA1-201ENST00000358519 FAM181BA6NEQ2 426 aa5.36□□□□□ -1.55
CNGA1-201ENST00000358519 ANP32CO43423 234 aa5.36□□□□□ -1.55
CNGA1-201ENST00000358519 GLIPR1L2Q4G1C9 344 aa5.36□□□□□ -1.55
CNGA1-201ENST00000358519 RSPH6AQ9H0K4 717 aa5.36□□□□□ -1.55
CNGA1-201ENST00000358519 A2ML1A8K2U0 1454 aa5.36□□□□□ -1.55
CNGA1-201ENST00000358519 CCDC144AA2RUR9 1427 aa5.35□□□□□ -1.55
CNGA1-201ENST00000358519 NEFMP07197 916 aa5.35□□□□□ -1.55
CNGA1-201ENST00000358519 USP35Q9P2H5 1018 aa5.35□□□□□ -1.55
CNGA1-201ENST00000358519 DIP2AQ14689 1571 aa5.35□□□□□ -1.55
CNGA1-201ENST00000358519 PRAG1Q86YV5 1406 aa5.35□□□□□ -1.55
CNGA1-201ENST00000358519 TRIM6-TRIM34B2RNG4 842 aa5.35□□□□□ -1.55
CNGA1-201ENST00000358519 RANGAP1P46060 587 aaPredicted RBP5.35□□□□□ -1.55
CNGA1-201ENST00000358519 TYW1BQ6NUM6 668 aa5.35□□□□□ -1.55
CNGA1-201ENST00000358519 PUS7Q96PZ0 661 aaKnown RBP5.35□□□□□ -1.55
CNGA1-201ENST00000358519 USP32Q8NFA0 1604 aa5.35□□□□□ -1.55
CNGA1-201ENST00000358519 NOS1P29475 1434 aa5.35□□□□□ -1.55
CNGA1-201ENST00000358519 CLTCL1P53675 1640 aa5.34□□□□□ -1.55
CNGA1-201ENST00000358519 HNRNPUQ00839 825 aaKnown RBP eCLIP5.34□□□□□ -1.55
CNGA1-201ENST00000358519 NFX1Q12986 1120 aaKnown RBP5.34□□□□□ -1.55
CNGA1-201ENST00000358519 VSIG10Q8N0Z9 540 aa5.34□□□□□ -1.55
CNGA1-201ENST00000358519 THEMISQ8N1K5 641 aaPredicted RBP5.34□□□□□ -1.55
CNGA1-201ENST00000358519 ZNF772Q68DY9 489 aaPredicted RBP5.34□□□□□ -1.55
CNGA1-201ENST00000358519 PCDHGA10Q9Y5H3 936 aa5.34□□□□□ -1.55
CNGA1-201ENST00000358519 SBNO2Q9Y2G9 1366 aa5.34□□□□□ -1.56
CNGA1-201ENST00000358519 SPATA31E1Q6ZUB1 1445 aa5.34□□□□□ -1.56
CNGA1-201ENST00000358519 SLC19A1P41440 591 aa5.33□□□□□ -1.56
CNGA1-201ENST00000358519 ZNF516Q92618 1163 aa5.33□□□□□ -1.56
CNGA1-201ENST00000358519 AAASQ9NRG9 546 aa5.33□□□□□ -1.56
CNGA1-201ENST00000358519 NUP155O75694 1391 aa5.33□□□□□ -1.56
CNGA1-201ENST00000358519 FAM187AA6NFU0 413 aa5.33□□□□□ -1.56
CNGA1-201ENST00000358519 EIF3AQ14152 1382 aaKnown RBP5.33□□□□□ -1.56
CNGA1-201ENST00000358519 NPHP4O75161 1426 aaPredicted RBP5.33□□□□□ -1.56
CNGA1-201ENST00000358519 DLC1Q96QB1 1528 aa5.33□□□□□ -1.56
CNGA1-201ENST00000358519 SETD1AO15047 1707 aaKnown RBP5.33□□□□□ -1.56
CNGA1-201ENST00000358519 CLTCQ00610 1675 aaKnown RBP5.32□□□□□ -1.56
CNGA1-201ENST00000358519 PPP1R15BQ5SWA1 713 aa5.32□□□□□ -1.56
CNGA1-201ENST00000358519 ZNF598Q86UK7 904 aaKnown RBP5.32□□□□□ -1.56
CNGA1-201ENST00000358519 ALKQ9UM73 1620 aa5.32□□□□□ -1.56
CNGA1-201ENST00000358519 FAM135BQ49AJ0 1406 aa5.32□□□□□ -1.56
CNGA1-201ENST00000358519 MEX3CQ5U5Q3 659 aaKnown RBP5.32□□□□□ -1.56
CNGA1-201ENST00000358519 LAS1LQ9Y4W2 734 aaKnown RBP5.32□□□□□ -1.56
CNGA1-201ENST00000358519 LRRC7Q96NW7 1537 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms