RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 PIBF1Q8WXW3 757 aa8.23□□□□□ -1.09
NF1-202ENST00000358273 NAP1L1P55209 391 aaKnown RBP8.22□□□□□ -1.09
NF1-202ENST00000358273 NAT10Q9H0A0 1025 aaKnown RBP8.22□□□□□ -1.09
NF1-202ENST00000358273 CWC22Q9HCG8 908 aaKnown RBP8.22□□□□□ -1.09
NF1-202ENST00000358273 MYH6P13533 1939 aa8.22□□□□□ -1.09
NF1-202ENST00000358273 PDE6BP35913 854 aa8.22□□□□□ -1.09
NF1-202ENST00000358273 PCF11O94913 1555 aaKnown RBP8.22□□□□□ -1.09
NF1-202ENST00000358273 CASQ1P31415 396 aa8.22□□□□□ -1.09
NF1-202ENST00000358273 RAB3GAP1Q15042 981 aa8.22□□□□□ -1.09
NF1-202ENST00000358273 ENOX2Q16206 610 aaKnown RBP8.22□□□□□ -1.09
NF1-202ENST00000358273 DHX8Q14562 1220 aaKnown RBP8.22□□□□□ -1.09
NF1-202ENST00000358273 RRP15Q9Y3B9 282 aaKnown RBP8.22□□□□□ -1.09
NF1-202ENST00000358273 NAA25Q14CX7 972 aa8.22□□□□□ -1.09
NF1-202ENST00000358273 RBSNQ9H1K0 784 aa8.22□□□□□ -1.09
NF1-202ENST00000358273 KIF1CO43896 1103 aaKnown RBP8.22□□□□□ -1.09
NF1-202ENST00000358273 ATP2C2O75185 946 aa8.22□□□□□ -1.09
NF1-202ENST00000358273 ARHGAP29Q52LW3 1261 aa8.22□□□□□ -1.09
NF1-202ENST00000358273 PRPF38AQ8NAV1 312 aaKnown RBP8.22□□□□□ -1.09
NF1-202ENST00000358273 HFM1A2PYH4 1435 aa8.22□□□□□ -1.09
NF1-202ENST00000358273 HECW1Q76N89 1606 aa8.22□□□□□ -1.09
NF1-202ENST00000358273 SHTN1A0MZ66 631 aa8.22□□□□□ -1.09
NF1-202ENST00000358273 GBP2P32456 591 aaPredicted RBP8.22□□□□□ -1.09
NF1-202ENST00000358273 CLNS1AP54105 237 aaKnown RBP8.21□□□□□ -1.09
NF1-202ENST00000358273 ELF2Q15723 593 aa8.21□□□□□ -1.09
NF1-202ENST00000358273 TNMDQ9H2S6 317 aa8.21□□□□□ -1.09
NF1-202ENST00000358273 NUMA1Q14980 2115 aa8.21□□□□□ -1.09
NF1-202ENST00000358273 KDM2BQ8NHM5 1336 aa8.21□□□□□ -1.09
NF1-202ENST00000358273 BRMS1Q9HCU9 246 aa8.21□□□□□ -1.09
NF1-202ENST00000358273 RNF123Q5XPI4 1314 aa8.21□□□□□ -1.09
NF1-202ENST00000358273 FHOD3Q2V2M9 1422 aa8.21□□□□□ -1.09
NF1-202ENST00000358273 BCAR3O75815 825 aa8.21□□□□□ -1.09
NF1-202ENST00000358273 KIF14Q15058 1648 aa8.21□□□□□ -1.1
NF1-202ENST00000358273 RGL3Q3MIN7 710 aa8.21□□□□□ -1.1
NF1-202ENST00000358273 BIRC2Q13490 618 aa8.21□□□□□ -1.1
NF1-202ENST00000358273 ERCC4Q92889 916 aaPredicted RBP8.21□□□□□ -1.1
NF1-202ENST00000358273 CCDC171Q6TFL3 1326 aa8.2□□□□□ -1.1
NF1-202ENST00000358273 VGFO15240 615 aaPredicted RBP8.2□□□□□ -1.1
NF1-202ENST00000358273 CCAR1Q8IX12 1150 aaKnown RBP8.2□□□□□ -1.1
NF1-202ENST00000358273 PPP1R9BQ96SB3 815 aa8.2□□□□□ -1.1
NF1-202ENST00000358273 GCC2Q8IWJ2 1684 aa8.2□□□□□ -1.1
NF1-202ENST00000358273 KIF4AO95239 1232 aa8.2□□□□□ -1.1
NF1-202ENST00000358273 MICALL1Q8N3F8 863 aa8.2□□□□□ -1.1
NF1-202ENST00000358273 NCAPGQ9BPX3 1015 aa8.2□□□□□ -1.1
NF1-202ENST00000358273 PAIP2Q9BPZ3 127 aaKnown RBP8.2□□□□□ -1.1
NF1-202ENST00000358273 LRRCC1Q9C099 1032 aa8.2□□□□□ -1.1
NF1-202ENST00000358273 HCLS1P14317 486 aaPredicted RBP8.2□□□□□ -1.1
NF1-202ENST00000358273 SUDS3Q9H7L9 328 aaPredicted RBP8.2□□□□□ -1.1
NF1-202ENST00000358273 SAMD1Q6SPF0 538 aaPredicted RBP8.2□□□□□ -1.1
NF1-202ENST00000358273 MORC1Q86VD1 984 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 ANKRD18AQ8IVF6 992 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 INTS3Q68E01 1043 aaKnown RBP8.19□□□□□ -1.1
NF1-202ENST00000358273 ZNF853P0CG23 659 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 SCLT1Q96NL6 688 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 DCTN1Q14203 1278 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 CEP57Q86XR8 500 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 JRKLQ9Y4A0 524 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 SEC24BO95487 1268 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 ZSCAN26Q16670 478 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 PRM3Q9NNZ6 103 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 APAF1O14727 1248 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 TERF2Q15554 542 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 YY1AP1Q9H869 796 aa8.19□□□□□ -1.1
NF1-202ENST00000358273 A0A0G2JS52 829 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 PKD2Q13563 968 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 KIAA1328Q86T90 577 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 GAS2L3Q86XJ1 694 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 FYCO1Q9BQS8 1478 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 E2F4Q16254 413 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 FMNL2Q96PY5 1086 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 INCENPQ9NQS7 918 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 ST20-MTHFSA0A0A6YYL1 179 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.18□□□□□ -1.11e-6■■■■■ 34.9
NF1-202ENST00000358273 KDM4AO75164 1064 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 PPARDQ03181 441 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 PDE3AQ14432 1141 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 CAMK4Q16566 473 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 AP1ARQ63HQ0 302 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 SMC5Q8IY18 1101 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 TMCO5BA8MYB1 307 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 SETSIPP0DME0 302 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 TRMT1Q9NXH9 659 aaKnown RBP8.18□□□□□ -1.1
NF1-202ENST00000358273 RAD51AP2Q09MP3 1159 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 MYOM3Q5VTT5 1437 aa8.18□□□□□ -1.1
NF1-202ENST00000358273 EZRP15311 586 aaKnown RBP8.17□□□□□ -1.1
NF1-202ENST00000358273 VPS18Q9P253 973 aa8.17□□□□□ -1.1
NF1-202ENST00000358273 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.17□□□□□ -1.1
NF1-202ENST00000358273 SNW1Q13573 536 aaKnown RBP8.17□□□□□ -1.1
NF1-202ENST00000358273 NEK4P51957 841 aa8.17□□□□□ -1.1
NF1-202ENST00000358273 CALR3Q96L12 384 aaKnown RBP8.17□□□□□ -1.1
NF1-202ENST00000358273 ADAMTS8Q9UP79 889 aa8.17□□□□□ -1.1
NF1-202ENST00000358273 WDR33Q9C0J8 1336 aaKnown RBP8.17□□□□□ -1.1
NF1-202ENST00000358273 EIF4G1Q04637 1599 aaKnown RBP8.17□□□□□ -1.1
NF1-202ENST00000358273 H3BQV1 296 aa8.17□□□□□ -1.1
NF1-202ENST00000358273 IFFO2Q5TF58 517 aa8.17□□□□□ -1.1
NF1-202ENST00000358273 CLASRPQ8N2M8 674 aaKnown RBP8.17□□□□□ -1.1
NF1-202ENST00000358273 ARFGAP3Q9NP61 516 aa8.17□□□□□ -1.1
NF1-202ENST00000358273 SMC3Q9UQE7 1217 aa8.17□□□□□ -1.1
NF1-202ENST00000358273 IBTKQ9P2D0 1353 aaPredicted RBP8.17□□□□□ -1.1
NF1-202ENST00000358273 MAP3K11Q16584 847 aa8.17□□□□□ -1.1
NF1-202ENST00000358273 SLU7O95391 586 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms