RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
CD46-204ENST00000357714 TSPYL6Q8N831 410 aa9.44□□□□□ -0.9
CD46-204ENST00000357714 RNF214Q8ND24 703 aa9.44□□□□□ -0.9
CD46-204ENST00000357714 PUS7Q96PZ0 661 aaKnown RBP9.44□□□□□ -0.9
CD46-204ENST00000357714 CWC22Q9HCG8 908 aaKnown RBP9.44□□□□□ -0.9
CD46-204ENST00000357714 A0A1W2PP64 1363 aa9.44□□□□□ -0.9
CD46-204ENST00000357714 SYCE3A1L190 88 aa9.43□□□□□ -0.9
CD46-204ENST00000357714 ZNF500O60304 480 aaPredicted RBP9.43□□□□□ -0.9
CD46-204ENST00000357714 CSPP1Q1MSJ5 1256 aa9.43□□□□□ -0.9
CD46-204ENST00000357714 INTS3Q68E01 1043 aaKnown RBP9.43□□□□□ -0.9
CD46-204ENST00000357714 PLEKHM2Q8IWE5 1019 aa9.43□□□□□ -0.9
CD46-204ENST00000357714 ZKSCAN5Q9Y2L8 839 aa9.43□□□□□ -0.9
CD46-204ENST00000357714 ZBTB7CA1YPR0 619 aa9.43□□□□□ -0.9
CD46-204ENST00000357714 FCHSD2O94868 740 aa9.43□□□□□ -0.9
CD46-204ENST00000357714 HMOX1P09601 288 aa9.43□□□□□ -0.9
CD46-204ENST00000357714 ARHGAP45Q92619 1136 aa9.43□□□□□ -0.9
CD46-204ENST00000357714 NRXN1Q9ULB1 1477 aa9.43□□□□□ -0.9
CD46-204ENST00000357714 C16orf71Q8IYS4 520 aaPredicted RBP9.42□□□□□ -0.9
CD46-204ENST00000357714 PDLIM2Q96JY6 352 aa9.42□□□□□ -0.9
CD46-204ENST00000357714 USP26Q9BXU7 913 aa9.42□□□□□ -0.9
CD46-204ENST00000357714 ATP7AQ04656 1500 aa9.42□□□□□ -0.9
CD46-204ENST00000357714 TTC22Q5TAA0 569 aa9.42□□□□□ -0.9
CD46-204ENST00000357714 MYO3AQ8NEV4 1616 aa9.42□□□□□ -0.9
CD46-204ENST00000357714 GPT2Q8TD30 523 aa9.42□□□□□ -0.9
CD46-204ENST00000357714 CHAMP1Q96JM3 812 aa9.42□□□□□ -0.9
CD46-204ENST00000357714 API5Q9BZZ5 524 aaKnown RBP9.42□□□□□ -0.9
CD46-204ENST00000357714 CFAP74Q9C0B2 1584 aa9.42□□□□□ -0.9
CD46-204ENST00000357714 MINK1Q8N4C8 1332 aaPredicted RBP9.42□□□□□ -0.9
CD46-204ENST00000357714 VGFO15240 615 aaPredicted RBP9.42□□□□□ -0.9
CD46-204ENST00000357714 CYP2E1P05181 493 aaPredicted RBP9.42□□□□□ -0.9
CD46-204ENST00000357714 BRPF1P55201 1214 aaPredicted RBP9.42□□□□□ -0.9
CD46-204ENST00000357714 TWISTNBQ3B726 338 aaPredicted RBP9.42□□□□□ -0.9
CD46-204ENST00000357714 CCDC39Q9UFE4 941 aa9.42□□□□□ -0.9
CD46-204ENST00000357714 NEURL4Q96JN8 1562 aa9.41□□□□□ -0.9
CD46-204ENST00000357714 GNAI1P63096 354 aa9.41□□□□□ -0.9
CD46-204ENST00000357714 DNTTIP2Q5QJE6 756 aaKnown RBP9.41□□□□□ -0.9
CD46-204ENST00000357714 PRDM10Q9NQV6 1147 aa9.41□□□□□ -0.9
CD46-204ENST00000357714 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
CD46-204ENST00000357714 KIF1BO60333 1816 aa9.41□□□□□ -0.9
CD46-204ENST00000357714 RPGRIP1LQ68CZ1 1315 aa9.41□□□□□ -0.9
CD46-204ENST00000357714 LRSAM1Q6UWE0 723 aa9.41□□□□□ -0.9
CD46-204ENST00000357714 HDGFL2Q7Z4V5 671 aaPredicted RBP9.41□□□□□ -0.9
CD46-204ENST00000357714 TMEM63CQ9P1W3 806 aa9.41□□□□□ -0.9
CD46-204ENST00000357714 ATAD2Q6PL18 1390 aa9.41□□□□□ -0.9
CD46-204ENST00000357714 DEPDC5O75140 1603 aa9.41□□□□□ -0.9
CD46-204ENST00000357714 FBLN1P23142 703 aa9.4□□□□□ -0.9
CD46-204ENST00000357714 ZHX1Q9UKY1 873 aaPredicted RBP9.4□□□□□ -0.9
CD46-204ENST00000357714 VWDEQ8N2E2 1590 aa9.4□□□□□ -0.9
CD46-204ENST00000357714 SETBP1Q9Y6X0 1596 aa9.4□□□□□ -0.9
CD46-204ENST00000357714 FANCAO15360 1455 aa9.4□□□□□ -0.9
CD46-204ENST00000357714 QRICH2Q9H0J4 1663 aa9.4□□□□□ -0.9
CD46-204ENST00000357714 MCM5P33992 734 aa9.4□□□□□ -0.9
CD46-204ENST00000357714 NFE2L2Q16236 605 aa9.4□□□□□ -0.9
CD46-204ENST00000357714 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.4□□□□□ -0.91e-6■■■□□ 18.3
CD46-204ENST00000357714 OTUD7AQ8TE49 926 aaPredicted RBP9.4□□□□□ -0.9
CD46-204ENST00000357714 PHACTR3Q96KR7 559 aa9.4□□□□□ -0.9
CD46-204ENST00000357714 DCTPP1Q9H773 170 aa9.4□□□□□ -0.9
CD46-204ENST00000357714 ABCC4O15439 1325 aa9.4□□□□□ -0.91
CD46-204ENST00000357714 DYNC1I1O14576 645 aa9.4□□□□□ -0.91
CD46-204ENST00000357714 REC8O95072 547 aa9.4□□□□□ -0.91
CD46-204ENST00000357714 MTERF4Q7Z6M4 381 aaKnown RBP9.4□□□□□ -0.91
CD46-204ENST00000357714 MBIPQ9NS73 344 aa9.4□□□□□ -0.91
CD46-204ENST00000357714 MED14O60244 1454 aa9.4□□□□□ -0.91
CD46-204ENST00000357714 SDSP20132 328 aa9.39□□□□□ -0.91
CD46-204ENST00000357714 SASS6Q6UVJ0 657 aa9.39□□□□□ -0.91
CD46-204ENST00000357714 USP32Q8NFA0 1604 aa9.39□□□□□ -0.91
CD46-204ENST00000357714 ADGRB1O14514 1584 aa9.39□□□□□ -0.91
CD46-204ENST00000357714 EFCAB6Q5THR3 1501 aa9.39□□□□□ -0.91
CD46-204ENST00000357714 MBD3O95983 291 aa9.39□□□□□ -0.91
CD46-204ENST00000357714 NSFL1CQ9UNZ2 370 aaKnown RBP9.39□□□□□ -0.91
CD46-204ENST00000357714 ZDHHC9Q9Y397 364 aa9.39□□□□□ -0.91
CD46-204ENST00000357714 SMARCA5O60264 1052 aaPredicted RBP9.38□□□□□ -0.91
CD46-204ENST00000357714 FOXD4L6Q3SYB3 417 aaPredicted RBP9.38□□□□□ -0.91
CD46-204ENST00000357714 FOXD4L3Q6VB84 417 aaPredicted RBP9.38□□□□□ -0.91
CD46-204ENST00000357714 IFT57Q9NWB7 429 aa9.38□□□□□ -0.91
CD46-204ENST00000357714 NEK4P51957 841 aa9.38□□□□□ -0.91
CD46-204ENST00000357714 NOL8Q76FK4 1167 aaKnown RBP9.38□□□□□ -0.91
CD46-204ENST00000357714 C8orf58Q8NAV2 365 aa9.38□□□□□ -0.91
CD46-204ENST00000357714 TULP4Q9NRJ4 1543 aa9.38□□□□□ -0.91
CD46-204ENST00000357714 AK9Q5TCS8 1911 aa9.38□□□□□ -0.91
CD46-204ENST00000357714 MROH2AA6NES4 1674 aa9.38□□□□□ -0.91
CD46-204ENST00000357714 PTCH1Q13635 1447 aa9.38□□□□□ -0.91
CD46-204ENST00000357714 ADGRB3O60242 1522 aa9.38□□□□□ -0.91
CD46-204ENST00000357714 MPNDQ8N594 471 aa9.38□□□□□ -0.91
CD46-204ENST00000357714 PIK3R4Q99570 1358 aa9.38□□□□□ -0.91
CD46-204ENST00000357714 COL3A1P02461 1466 aaPredicted RBP9.38□□□□□ -0.91
CD46-204ENST00000357714 KIAA2012Q0VF49 1180 aa9.37□□□□□ -0.91
CD46-204ENST00000357714 PRAM1Q96QH2 718 aa9.37□□□□□ -0.91
CD46-204ENST00000357714 CABP1Q9NZU7 370 aa9.37□□□□□ -0.91
CD46-204ENST00000357714 NPATQ14207 1427 aa9.37□□□□□ -0.91
CD46-204ENST00000357714 ERC2O15083 957 aa9.37□□□□□ -0.91
CD46-204ENST00000357714 SYAP1Q96A49 352 aaPredicted RBP9.37□□□□□ -0.91
CD46-204ENST00000357714 TSPY26PQ9H489 355 aa9.37□□□□□ -0.91
CD46-204ENST00000357714 TPRNQ4KMQ1 711 aa9.36□□□□□ -0.91
CD46-204ENST00000357714 ANKRD44Q8N8A2 993 aa9.36□□□□□ -0.91
CD46-204ENST00000357714 TMX3Q96JJ7 454 aa9.36□□□□□ -0.91
CD46-204ENST00000357714 POLKQ9UBT6 870 aa9.36□□□□□ -0.91
CD46-204ENST00000357714 ARAP3Q8WWN8 1544 aa9.36□□□□□ -0.91
CD46-204ENST00000357714 ARHGAP31Q2M1Z3 1444 aa9.36□□□□□ -0.91
CD46-204ENST00000357714 RPAP2Q8IXW5 612 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms