RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 FIBPO43427 364 aa13.55□□□□□ -0.24
SPTBN1-202ENST00000356805 PANK1Q8TE04 598 aa13.55□□□□□ -0.24
SPTBN1-202ENST00000356805 DYDC1Q8WWB3 177 aa13.55□□□□□ -0.24
SPTBN1-202ENST00000356805 CCDC69A6NI79 296 aa13.55□□□□□ -0.24
SPTBN1-202ENST00000356805 PRPF40AO75400 957 aaKnown RBP13.55□□□□□ -0.24
SPTBN1-202ENST00000356805 K7ELQ4 463 aaPredicted RBP13.55□□□□□ -0.24
SPTBN1-202ENST00000356805 DACH1Q9UI36 760 aa13.55□□□□□ -0.24
SPTBN1-202ENST00000356805 TMCO3Q6UWJ1 677 aa13.54□□□□□ -0.24
SPTBN1-202ENST00000356805 NUP133Q8WUM0 1156 aa13.54□□□□□ -0.24
SPTBN1-202ENST00000356805 PRIMPOLQ96LW4 560 aa13.54□□□□□ -0.24
SPTBN1-202ENST00000356805 GNAI1P63096 354 aa13.54□□□□□ -0.24
SPTBN1-202ENST00000356805 GOLGA6L10A0A0M3HER8 536 aa13.54□□□□□ -0.24
SPTBN1-202ENST00000356805 MAP4K4O95819 1239 aaPredicted RBP13.54□□□□□ -0.24
SPTBN1-202ENST00000356805 UBXN4Q92575 508 aa13.54□□□□□ -0.24
SPTBN1-202ENST00000356805 GNL3LQ9NVN8 582 aaKnown RBP13.54□□□□□ -0.24
SPTBN1-202ENST00000356805 CHMP4BP1P59074 171 aa13.54□□□□□ -0.24
SPTBN1-202ENST00000356805 CUX1P39880 1505 aa13.54□□□□□ -0.24
SPTBN1-202ENST00000356805 SSBP05455 408 aaKnown RBP eCLIP13.53□□□□□ -0.24
SPTBN1-202ENST00000356805 ANKRD1Q15327 319 aa13.53□□□□□ -0.24
SPTBN1-202ENST00000356805 ERC1Q8IUD2 1116 aa13.53□□□□□ -0.24
SPTBN1-202ENST00000356805 NF2P35240 595 aa13.53□□□□□ -0.24
SPTBN1-202ENST00000356805 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
SPTBN1-202ENST00000356805 STRN4Q9NRL3 753 aa13.53□□□□□ -0.24
SPTBN1-202ENST00000356805 CCDC158Q5M9N0 1113 aa13.53□□□□□ -0.24
SPTBN1-202ENST00000356805 MAP9Q49MG5 647 aa13.52□□□□□ -0.24
SPTBN1-202ENST00000356805 PIBF1Q8WXW3 757 aa13.52□□□□□ -0.24
SPTBN1-202ENST00000356805 NEMFO60524 1076 aa13.52□□□□□ -0.24
SPTBN1-202ENST00000356805 SURF6O75683 361 aaKnown RBP13.52□□□□□ -0.24
SPTBN1-202ENST00000356805 ME1P48163 572 aa13.52□□□□□ -0.24
SPTBN1-202ENST00000356805 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.52□□□□□ -0.24
SPTBN1-202ENST00000356805 RAPGEF2Q9Y4G8 1499 aa13.52□□□□□ -0.25
SPTBN1-202ENST00000356805 FILIP1Q7Z7B0 1213 aa13.52□□□□□ -0.25
SPTBN1-202ENST00000356805 ZNF76P36508 570 aa13.52□□□□□ -0.25
SPTBN1-202ENST00000356805 NEK4P51957 841 aa13.52□□□□□ -0.25
SPTBN1-202ENST00000356805 ANAPC15P60006 121 aa13.52□□□□□ -0.25
SPTBN1-202ENST00000356805 MPNDQ8N594 471 aa13.52□□□□□ -0.25
SPTBN1-202ENST00000356805 LRRCC1Q9C099 1032 aa13.52□□□□□ -0.25
SPTBN1-202ENST00000356805 KRT85P78386 507 aa13.51□□□□□ -0.25
SPTBN1-202ENST00000356805 TRIM21P19474 475 aaKnown RBP13.51□□□□□ -0.25
SPTBN1-202ENST00000356805 ZMYND15Q9H091 742 aa13.51□□□□□ -0.25
SPTBN1-202ENST00000356805 ZSCAN29Q8IWY8 852 aaPredicted RBP13.51□□□□□ -0.25
SPTBN1-202ENST00000356805 TNMDQ9H2S6 317 aa13.51□□□□□ -0.25
SPTBN1-202ENST00000356805 SCAPERQ9BY12 1400 aa13.51□□□□□ -0.25
SPTBN1-202ENST00000356805 SHTN1A0MZ66 631 aa13.51□□□□□ -0.25
SPTBN1-202ENST00000356805 SIL1Q9H173 461 aa13.51□□□□□ -0.25
SPTBN1-202ENST00000356805 SOGA3Q5TF21 947 aa13.51□□□□□ -0.25
SPTBN1-202ENST00000356805 C1orf115Q9H7X2 142 aa13.51□□□□□ -0.25
SPTBN1-202ENST00000356805 KIF18AQ8NI77 898 aa13.51□□□□□ -0.25
SPTBN1-202ENST00000356805 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
SPTBN1-202ENST00000356805 TRIM22Q8IYM9 498 aa13.5□□□□□ -0.25
SPTBN1-202ENST00000356805 CCDC30Q5VVM6 783 aa13.5□□□□□ -0.25
SPTBN1-202ENST00000356805 CTR9Q6PD62 1173 aa13.5□□□□□ -0.25
SPTBN1-202ENST00000356805 KIAA1328Q86T90 577 aa13.5□□□□□ -0.25
SPTBN1-202ENST00000356805 MICALCLQ6ZW33 695 aa13.5□□□□□ -0.25
SPTBN1-202ENST00000356805 CCDC91Q7Z6B0 441 aa13.5□□□□□ -0.25
SPTBN1-202ENST00000356805 CLCN1P35523 988 aa13.5□□□□□ -0.25
SPTBN1-202ENST00000356805 TIGD1Q96MW7 591 aa13.5□□□□□ -0.25
SPTBN1-202ENST00000356805 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
SPTBN1-202ENST00000356805 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
SPTBN1-202ENST00000356805 CEP57L1Q8IYX8 460 aa13.49□□□□□ -0.25
SPTBN1-202ENST00000356805 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
SPTBN1-202ENST00000356805 MAPK8IP2Q13387 824 aaPredicted RBP13.49□□□□□ -0.25
SPTBN1-202ENST00000356805 ERICH4A6NGS2 130 aa13.49□□□□□ -0.25
SPTBN1-202ENST00000356805 CAVIN2O95810 425 aa13.49□□□□□ -0.25
SPTBN1-202ENST00000356805 CCDC113Q9H0I3 377 aa13.49□□□□□ -0.25
SPTBN1-202ENST00000356805 PSMD1Q99460 953 aa13.48□□□□□ -0.25
SPTBN1-202ENST00000356805 PLEKHH2Q8IVE3 1493 aa13.48□□□□□ -0.25
SPTBN1-202ENST00000356805 TOP2AP11388 1531 aaKnown RBP13.48□□□□□ -0.25
SPTBN1-202ENST00000356805 JAKMIP3Q5VZ66 844 aa13.48□□□□□ -0.25
SPTBN1-202ENST00000356805 ABTB2Q8N961 1025 aa13.48□□□□□ -0.25
SPTBN1-202ENST00000356805 PLEKHH1Q9ULM0 1364 aa13.48□□□□□ -0.25
SPTBN1-202ENST00000356805 USP5P45974 858 aa13.48□□□□□ -0.25
SPTBN1-202ENST00000356805 MAP2K1Q02750 393 aaPredicted RBP13.48□□□□□ -0.25
SPTBN1-202ENST00000356805 CFAP45Q9UL16 551 aa13.48□□□□□ -0.25
SPTBN1-202ENST00000356805 FHOD3Q2V2M9 1422 aa13.48□□□□□ -0.25
SPTBN1-202ENST00000356805 FKBP4Q02790 459 aaKnown RBP eCLIP13.48□□□□□ -0.25
SPTBN1-202ENST00000356805 CCDC102AQ96A19 550 aa13.48□□□□□ -0.25
SPTBN1-202ENST00000356805 ZSCAN12O43309 604 aa13.47□□□□□ -0.25
SPTBN1-202ENST00000356805 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
SPTBN1-202ENST00000356805 GTPBP4Q9BZE4 634 aaKnown RBP13.47□□□□□ -0.25
SPTBN1-202ENST00000356805 MYL6BP14649 208 aa13.47□□□□□ -0.25
SPTBN1-202ENST00000356805 CEP63Q96MT8 703 aa13.47□□□□□ -0.25
SPTBN1-202ENST00000356805 NBPF1Q3BBV0 1214 aa13.47□□□□□ -0.25
SPTBN1-202ENST00000356805 SLC26A8Q96RN1 970 aa13.47□□□□□ -0.25
SPTBN1-202ENST00000356805 NACAP1Q9BZK3 213 aa13.47□□□□□ -0.25
SPTBN1-202ENST00000356805 SMTNL1A8MU46 457 aa13.46□□□□□ -0.25
SPTBN1-202ENST00000356805 CRACR2AQ9BSW2 395 aa13.46□□□□□ -0.25
SPTBN1-202ENST00000356805 PTPN14Q15678 1187 aa13.46□□□□□ -0.25
SPTBN1-202ENST00000356805 GNAI3P08754 354 aa13.46□□□□□ -0.25
SPTBN1-202ENST00000356805 CABP2Q9NPB3 220 aa13.46□□□□□ -0.25
SPTBN1-202ENST00000356805 GOPCQ9HD26 462 aa13.46□□□□□ -0.26
SPTBN1-202ENST00000356805 TDRD9Q8NDG6 1382 aaKnown RBP13.45□□□□□ -0.26
SPTBN1-202ENST00000356805 POLR3GO15318 223 aaPredicted RBP13.45□□□□□ -0.26
SPTBN1-202ENST00000356805 BMP2KQ9NSY1 1161 aaPredicted RBP13.45□□□□□ -0.26
SPTBN1-202ENST00000356805 SCLT1Q96NL6 688 aa13.45□□□□□ -0.26
SPTBN1-202ENST00000356805 MPHOSPH8Q99549 860 aa13.45□□□□□ -0.26
SPTBN1-202ENST00000356805 CYP46A1Q9Y6A2 500 aa13.45□□□□□ -0.26
SPTBN1-202ENST00000356805 NUTM2BA6NNL0 878 aaPredicted RBP13.45□□□□□ -0.26
SPTBN1-202ENST00000356805 NUTM2EB1AL46 878 aaPredicted RBP13.45□□□□□ -0.26
SPTBN1-202ENST00000356805 NUTM2AQ8IVF1 878 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms