RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 CHMP5Q9NZZ3 219 aa16.3■□□□□ 0.2
RNF220-202ENST00000355387 BMP2KLQ5H9B9 411 aa16.3■□□□□ 0.2
RNF220-202ENST00000355387 PRKAR2BP31323 418 aa16.3■□□□□ 0.2
RNF220-202ENST00000355387 BRPF3Q9ULD4 1205 aa16.3■□□□□ 0.2
RNF220-202ENST00000355387 ABCC4O15439 1325 aa16.29■□□□□ 0.2
RNF220-202ENST00000355387 TOPAZ1Q8N9V7 1692 aa16.29■□□□□ 0.2
RNF220-202ENST00000355387 MRPL50Q8N5N7 158 aaKnown RBP16.29■□□□□ 0.2
RNF220-202ENST00000355387 SLKQ9H2G2 1235 aaPredicted RBP16.29■□□□□ 0.2
RNF220-202ENST00000355387 CHD1LQ86WJ1 897 aa16.28■□□□□ 0.2
RNF220-202ENST00000355387 NALCNQ8IZF0 1738 aa16.28■□□□□ 0.2
RNF220-202ENST00000355387 VAMP4O75379 141 aa16.28■□□□□ 0.2
RNF220-202ENST00000355387 IL13P35225 146 aa16.28■□□□□ 0.2
RNF220-202ENST00000355387 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
RNF220-202ENST00000355387 ZBTB7BO15156 539 aaPredicted RBP16.27■□□□□ 0.2
RNF220-202ENST00000355387 FBXO31Q5XUX0 539 aaPredicted RBP16.27■□□□□ 0.2
RNF220-202ENST00000355387 FAM43AQ8N2R8 423 aa16.27■□□□□ 0.2
RNF220-202ENST00000355387 CFAP44Q96MT7 982 aa16.26■□□□□ 0.19
RNF220-202ENST00000355387 DDIT3P35638 169 aa16.26■□□□□ 0.19
RNF220-202ENST00000355387 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
RNF220-202ENST00000355387 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
RNF220-202ENST00000355387 WASLO00401 505 aaPredicted RBP16.25■□□□□ 0.19
RNF220-202ENST00000355387 MCM4P33991 863 aa16.25■□□□□ 0.19
RNF220-202ENST00000355387 UBE2Q2Q8WVN8 375 aa16.25■□□□□ 0.19
RNF220-202ENST00000355387 MFAP1P55081 439 aaKnown RBP16.25■□□□□ 0.19
RNF220-202ENST00000355387 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
RNF220-202ENST00000355387 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
RNF220-202ENST00000355387 RTN4Q9NQC3 1192 aaKnown RBP16.24■□□□□ 0.19
RNF220-202ENST00000355387 ISY1Q9ULR0 285 aaKnown RBP16.24■□□□□ 0.19
RNF220-202ENST00000355387 API5Q9BZZ5 524 aaKnown RBP16.24■□□□□ 0.19
RNF220-202ENST00000355387 HAP1P54257 671 aaPredicted RBP16.23■□□□□ 0.19
RNF220-202ENST00000355387 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
RNF220-202ENST00000355387 FSD2A1L4K1 749 aa16.22■□□□□ 0.19
RNF220-202ENST00000355387 DDX11L8A8MPP1 907 aa16.22■□□□□ 0.19
RNF220-202ENST00000355387 PTMSP20962 102 aa16.22■□□□□ 0.19
RNF220-202ENST00000355387 PHACTR3Q96KR7 559 aa16.22■□□□□ 0.19
RNF220-202ENST00000355387 UBR1Q8IWV7 1749 aa16.21■□□□□ 0.19
RNF220-202ENST00000355387 MBIPQ9NS73 344 aa16.2■□□□□ 0.18
RNF220-202ENST00000355387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.2■□□□□ 0.181e-7■□□□□ 10.8
RNF220-202ENST00000355387 TSPOAP1O95153 1857 aa16.19■□□□□ 0.18
RNF220-202ENST00000355387 HDGFP51858 240 aaKnown RBP16.19■□□□□ 0.18
RNF220-202ENST00000355387 WAPLQ7Z5K2 1190 aa16.19■□□□□ 0.18
RNF220-202ENST00000355387 COG3Q96JB2 828 aa16.19■□□□□ 0.18
RNF220-202ENST00000355387 LNPKQ9C0E8 428 aa16.19■□□□□ 0.18
RNF220-202ENST00000355387 CCDC61Q9Y6R9 512 aa16.19■□□□□ 0.18
RNF220-202ENST00000355387 KIAA0232Q92628 1395 aa16.19■□□□□ 0.18
RNF220-202ENST00000355387 TWISTNBQ3B726 338 aaPredicted RBP16.19■□□□□ 0.18
RNF220-202ENST00000355387 FMN2Q9NZ56 1722 aa16.18■□□□□ 0.18
RNF220-202ENST00000355387 EMILIN1Q9Y6C2 1016 aa16.18■□□□□ 0.18
RNF220-202ENST00000355387 METP08581 1390 aa16.18■□□□□ 0.18
RNF220-202ENST00000355387 RIMS1Q86UR5 1692 aaKnown RBP16.17■□□□□ 0.18
RNF220-202ENST00000355387 OVOS2A0A0J9YW53 1432 aa16.17■□□□□ 0.18
RNF220-202ENST00000355387 OVOS2Q6IE36 1432 aa16.17■□□□□ 0.18
RNF220-202ENST00000355387 NUDT16Q96DE0 195 aaKnown RBP16.17■□□□□ 0.18
RNF220-202ENST00000355387 INTS3Q68E01 1043 aaKnown RBP16.17■□□□□ 0.18
RNF220-202ENST00000355387 NME9Q86XW9 330 aa16.16■□□□□ 0.18
RNF220-202ENST00000355387 HMOX1P09601 288 aa16.16■□□□□ 0.18
RNF220-202ENST00000355387 TSPYL6Q8N831 410 aa16.16■□□□□ 0.18
RNF220-202ENST00000355387 GOLGA6L3A6NEY3 463 aa16.15■□□□□ 0.18
RNF220-202ENST00000355387 SIRT2Q8IXJ6 389 aa16.15■□□□□ 0.18
RNF220-202ENST00000355387 ANKRD45Q5TZF3 282 aa16.15■□□□□ 0.18
RNF220-202ENST00000355387 KIF2CQ99661 725 aa16.15■□□□□ 0.18
RNF220-202ENST00000355387 N4BP2Q86UW6 1770 aaPredicted RBP16.15■□□□□ 0.18
RNF220-202ENST00000355387 TRAK2O60296 914 aa16.15■□□□□ 0.18
RNF220-202ENST00000355387 RGS12O14924 1447 aa16.15■□□□□ 0.18
RNF220-202ENST00000355387 CDC45O75419 566 aa16.14■□□□□ 0.17
RNF220-202ENST00000355387 PEAK1Q9H792 1746 aa16.14■□□□□ 0.17
RNF220-202ENST00000355387 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.14■□□□□ 0.17
RNF220-202ENST00000355387 ATP10DQ9P241 1426 aa16.14■□□□□ 0.17
RNF220-202ENST00000355387 DCTPP1Q9H773 170 aa16.14■□□□□ 0.17
RNF220-202ENST00000355387 CLEC17AQ6ZS10 378 aa16.13■□□□□ 0.17
RNF220-202ENST00000355387 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
RNF220-202ENST00000355387 PTPRCP08575 1304 aa16.13■□□□□ 0.17
RNF220-202ENST00000355387 RAB3GAP1Q15042 981 aa16.13■□□□□ 0.17
RNF220-202ENST00000355387 SKOR2Q2VWA4 1001 aaPredicted RBP16.13■□□□□ 0.17
RNF220-202ENST00000355387 TBC1D9Q6ZT07 1266 aa16.13■□□□□ 0.17
RNF220-202ENST00000355387 GBP4Q96PP9 640 aa16.13■□□□□ 0.17
RNF220-202ENST00000355387 FAM69CQ0P6D2 419 aa16.12■□□□□ 0.17
RNF220-202ENST00000355387 C8orf58Q8NAV2 365 aa16.12■□□□□ 0.17
RNF220-202ENST00000355387 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
RNF220-202ENST00000355387 USP54Q70EL1 1684 aa16.12■□□□□ 0.17
RNF220-202ENST00000355387 MRE11P49959 708 aa16.12■□□□□ 0.17
RNF220-202ENST00000355387 RPAP2Q8IXW5 612 aaPredicted RBP16.12■□□□□ 0.17
RNF220-202ENST00000355387 THUMPD2Q9BTF0 503 aaKnown RBP16.12■□□□□ 0.17
RNF220-202ENST00000355387 TTC21BQ7Z4L5 1316 aa16.11■□□□□ 0.17
RNF220-202ENST00000355387 LRRC37A3O60309 1634 aa16.11■□□□□ 0.17
RNF220-202ENST00000355387 TMEM2Q9UHN6 1383 aa16.11■□□□□ 0.17
RNF220-202ENST00000355387 K7ELQ4 463 aaPredicted RBP16.1■□□□□ 0.17
RNF220-202ENST00000355387 CHL1O00533 1208 aa16.1■□□□□ 0.17
RNF220-202ENST00000355387 ANKRD44Q8N8A2 993 aa16.1■□□□□ 0.17
RNF220-202ENST00000355387 CACNA1FO60840 1977 aa16.1■□□□□ 0.17
RNF220-202ENST00000355387 ARHGEF10O15013 1369 aa16.1■□□□□ 0.17
RNF220-202ENST00000355387 ADAMTS13Q76LX8 1427 aa16.1■□□□□ 0.17
RNF220-202ENST00000355387 PLEKHG3A1L390 1219 aa16.1■□□□□ 0.17
RNF220-202ENST00000355387 SSH2Q76I76 1423 aa16.1■□□□□ 0.17
RNF220-202ENST00000355387 HSP90AB1P08238 724 aaKnown RBP16.1■□□□□ 0.17
RNF220-202ENST00000355387 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
RNF220-202ENST00000355387 USP6P35125 1406 aa16.09■□□□□ 0.17
RNF220-202ENST00000355387 XRCC6P12956 609 aaKnown RBP eCLIP16.09■□□□□ 0.17
RNF220-202ENST00000355387 FBLN1P23142 703 aa16.09■□□□□ 0.17
RNF220-202ENST00000355387 TUBGCP6Q96RT7 1819 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms