RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 KRT222Q8N1A0 295 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 CEP131Q9UPN4 1083 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 KIF14Q15058 1648 aa9.44□□□□□ -0.9
HTT-201ENST00000355072 TUBB2AQ13885 445 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 TUBB2BQ9BVA1 445 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 SLC3A2P08195 630 aaKnown RBP9.43□□□□□ -0.9
HTT-201ENST00000355072 CLCN1P35523 988 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 PHAXQ9H814 394 aaKnown RBP9.43□□□□□ -0.9
HTT-201ENST00000355072 CFAP43Q8NDM7 1665 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 FGFR1OPO95684 399 aaKnown RBP9.43□□□□□ -0.9
HTT-201ENST00000355072 PDE4CQ08493 712 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 ALS2CR12Q96Q35 445 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 MARCH6O60337 910 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 NUTM1Q86Y26 1132 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 FAM114A2Q9NRY5 505 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 NSRP1Q9H0G5 558 aaKnown RBP9.43□□□□□ -0.9
HTT-201ENST00000355072 KIF5CO60282 957 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 ANKRD45Q5TZF3 282 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 RUNDC1Q96C34 613 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 RALGAPBQ86X10 1494 aa9.43□□□□□ -0.9
HTT-201ENST00000355072 IRX3P78415 501 aaPredicted RBP9.43□□□□□ -0.9
HTT-201ENST00000355072 CASKIN1Q8WXD9 1431 aa9.42□□□□□ -0.9
HTT-201ENST00000355072 A0A1B0GUA9 196 aa9.42□□□□□ -0.9
HTT-201ENST00000355072 KIF3CO14782 793 aa9.42□□□□□ -0.9
HTT-201ENST00000355072 GNAI3P08754 354 aa9.42□□□□□ -0.9
HTT-201ENST00000355072 TPRNQ4KMQ1 711 aa9.42□□□□□ -0.9
HTT-201ENST00000355072 AIMP1Q12904 312 aaKnown RBP9.42□□□□□ -0.9
HTT-201ENST00000355072 ZSCAN31Q96LW9 406 aaPredicted RBP9.42□□□□□ -0.9
HTT-201ENST00000355072 PKD2Q13563 968 aa9.42□□□□□ -0.9
HTT-201ENST00000355072 CTCFLQ8NI51 663 aaPredicted RBP9.42□□□□□ -0.9
HTT-201ENST00000355072 IFI16Q16666 785 aaKnown RBP9.42□□□□□ -0.9
HTT-201ENST00000355072 FERMT1Q9BQL6 677 aa9.42□□□□□ -0.9
HTT-201ENST00000355072 BACH2Q9BYV9 841 aa9.42□□□□□ -0.9
HTT-201ENST00000355072 FHOD3Q2V2M9 1422 aa9.42□□□□□ -0.9
HTT-201ENST00000355072 TTC12Q9H892 705 aaPredicted RBP9.42□□□□□ -0.9
HTT-201ENST00000355072 CEP128Q6ZU80 1094 aa9.42□□□□□ -0.9
HTT-201ENST00000355072 RSRC1Q96IZ7 334 aaKnown RBP9.42□□□□□ -0.9
HTT-201ENST00000355072 R3HCC1Q9Y3T6 440 aaKnown RBP9.41□□□□□ -0.9
HTT-201ENST00000355072 NDC80O14777 642 aa9.41□□□□□ -0.9
HTT-201ENST00000355072 BMS1Q14692 1282 aaKnown RBP9.41□□□□□ -0.9
HTT-201ENST00000355072 CCDC30Q5VVM6 783 aa9.41□□□□□ -0.9
HTT-201ENST00000355072 PCMTD1Q96MG8 357 aaPredicted RBP9.41□□□□□ -0.9
HTT-201ENST00000355072 K7ELQ4 463 aaPredicted RBP9.41□□□□□ -0.9
HTT-201ENST00000355072 IFIT2P09913 472 aaKnown RBP9.41□□□□□ -0.9
HTT-201ENST00000355072 POTEDQ86YR6 584 aa9.41□□□□□ -0.9
HTT-201ENST00000355072 SMAP1Q8IYB5 467 aaPredicted RBP9.41□□□□□ -0.9
HTT-201ENST00000355072 CAMSAP2Q08AD1 1489 aa9.41□□□□□ -0.9
HTT-201ENST00000355072 CCDC175P0C221 793 aa9.41□□□□□ -0.9
HTT-201ENST00000355072 CCDC102AQ96A19 550 aa9.41□□□□□ -0.9
HTT-201ENST00000355072 HSPA4P34932 840 aa9.41□□□□□ -0.9
HTT-201ENST00000355072 UVSSAQ2YD98 709 aa9.41□□□□□ -0.9
HTT-201ENST00000355072 TNMDQ9H2S6 317 aa9.4□□□□□ -0.9
HTT-201ENST00000355072 FAM135AQ9P2D6 1515 aa9.4□□□□□ -0.9
HTT-201ENST00000355072 PPFIA3O75145 1194 aa9.4□□□□□ -0.9
HTT-201ENST00000355072 SH2B1Q9NRF2 756 aaPredicted RBP9.4□□□□□ -0.9
HTT-201ENST00000355072 ZBTB17Q13105 803 aa9.4□□□□□ -0.9
HTT-201ENST00000355072 CCDC150Q8NCX0 1101 aa9.4□□□□□ -0.9
HTT-201ENST00000355072 CCDC43Q96MW1 224 aaKnown RBP9.4□□□□□ -0.91
HTT-201ENST00000355072 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.4□□□□□ -0.91
HTT-201ENST00000355072 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.91
HTT-201ENST00000355072 EIF3DO15371 548 aaKnown RBP eCLIP9.4□□□□□ -0.912e-7■□□□□ 8.2
HTT-201ENST00000355072 C9orf78Q9NZ63 289 aaPredicted RBP9.39□□□□□ -0.91
HTT-201ENST00000355072 AQRO60306 1485 aaKnown RBP eCLIP9.39□□□□□ -0.915e-7■■■■□ 25
HTT-201ENST00000355072 CCDC172P0C7W6 258 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 CROCCP2Q86T23 111 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 MYO1BO43795 1136 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 ANO2Q9NQ90 1003 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 TRIM22Q8IYM9 498 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 ADGBQ8N7X0 1667 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 VGFO15240 615 aaPredicted RBP9.39□□□□□ -0.91
HTT-201ENST00000355072 SERPINC1P01008 464 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 DHX37Q8IY37 1157 aaKnown RBP9.39□□□□□ -0.91
HTT-201ENST00000355072 FMNL2Q96PY5 1086 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 MROH2BQ7Z745 1585 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 ARFGAP3Q9NP61 516 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 PRPHP41219 470 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 CENPHQ9H3R5 247 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 RPGRIP1LQ68CZ1 1315 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 CEP112Q8N8E3 955 aa9.39□□□□□ -0.91
HTT-201ENST00000355072 EPB41L2O43491 1005 aaKnown RBP9.38□□□□□ -0.91
HTT-201ENST00000355072 CTAGE1Q96RT6 745 aa9.38□□□□□ -0.91
HTT-201ENST00000355072 B4GALNT4Q76KP1 1039 aa9.38□□□□□ -0.91
HTT-201ENST00000355072 PABPN1Q86U42 306 aaKnown RBP eCLIP9.38□□□□□ -0.91
HTT-201ENST00000355072 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.38□□□□□ -0.919e-7■■■□□ 19.1
HTT-201ENST00000355072 CYP46A1Q9Y6A2 500 aa9.38□□□□□ -0.91
HTT-201ENST00000355072 NSD2O96028 1365 aa9.38□□□□□ -0.91
HTT-201ENST00000355072 CCDC183Q5T5S1 534 aa9.38□□□□□ -0.91
HTT-201ENST00000355072 CNGA1P29973 690 aa9.38□□□□□ -0.91
HTT-201ENST00000355072 PTPN14Q15678 1187 aa9.38□□□□□ -0.91
HTT-201ENST00000355072 CCDC94Q9BW85 323 aaPredicted RBP9.38□□□□□ -0.91
HTT-201ENST00000355072 ABCC11Q96J66 1382 aa9.38□□□□□ -0.91
HTT-201ENST00000355072 BUB1BO60566 1050 aaPredicted RBP9.38□□□□□ -0.91
HTT-201ENST00000355072 VPS37CA5D8V6 355 aaPredicted RBP9.38□□□□□ -0.91
HTT-201ENST00000355072 POTEJP0CG39 1038 aa9.38□□□□□ -0.91
HTT-201ENST00000355072 PIP4K2BP78356 416 aa9.38□□□□□ -0.91
HTT-201ENST00000355072 DDX19AQ9NUU7 478 aaKnown RBP9.38□□□□□ -0.91
HTT-201ENST00000355072 CEP83Q9Y592 693 aa9.38□□□□□ -0.91
HTT-201ENST00000355072 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
HTT-201ENST00000355072 CDK5RAP3Q96JB5 506 aa9.37□□□□□ -0.91
HTT-201ENST00000355072 SPA17Q15506 151 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms