RNA–Protein interactions for RNA: ENST00000355007.7

PTPA-204, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 5 BASIC

Gene PTPA, Length 2,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-204ENST00000355007 DYNC1I1O14576 645 aa23.93■■□□□ 1.42
PTPA-204ENST00000355007 PRIM1P49642 420 aaKnown RBP23.93■■□□□ 1.42
PTPA-204ENST00000355007 TULP4Q9NRJ4 1543 aa23.93■■□□□ 1.42
PTPA-204ENST00000355007 EVC2Q86UK5 1308 aa23.93■■□□□ 1.42
PTPA-204ENST00000355007 CWC22Q9HCG8 908 aaKnown RBP23.91■■□□□ 1.42
PTPA-204ENST00000355007 PTCH1Q13635 1447 aa23.91■■□□□ 1.42
PTPA-204ENST00000355007 ARHGAP45Q92619 1136 aa23.9■■□□□ 1.42
PTPA-204ENST00000355007 SIRT2Q8IXJ6 389 aa23.89■■□□□ 1.42
PTPA-204ENST00000355007 C1orf115Q9H7X2 142 aa23.89■■□□□ 1.42
PTPA-204ENST00000355007 GSPT1P15170 499 aaKnown RBP23.89■■□□□ 1.41
PTPA-204ENST00000355007 GPT2Q8TD30 523 aa23.88■■□□□ 1.41
PTPA-204ENST00000355007 CCDC39Q9UFE4 941 aa23.88■■□□□ 1.41
PTPA-204ENST00000355007 PKP1Q13835 747 aa23.88■■□□□ 1.41
PTPA-204ENST00000355007 TMEM132EQ6IEE7 984 aa23.88■■□□□ 1.41
PTPA-204ENST00000355007 LRSAM1Q6UWE0 723 aa23.87■■□□□ 1.41
PTPA-204ENST00000355007 SMAP1Q8IYB5 467 aaPredicted RBP23.87■■□□□ 1.41
PTPA-204ENST00000355007 LMTK2Q8IWU2 1503 aa23.87■■□□□ 1.41
PTPA-204ENST00000355007 GLI2P10070 1586 aa23.87■■□□□ 1.41
PTPA-204ENST00000355007 ARHGEF28Q8N1W1 1705 aaKnown RBP23.87■■□□□ 1.41
PTPA-204ENST00000355007 SASS6Q6UVJ0 657 aa23.87■■□□□ 1.41
PTPA-204ENST00000355007 ANKRD26Q9UPS8 1709 aa23.86■■□□□ 1.41
PTPA-204ENST00000355007 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
PTPA-204ENST00000355007 PRPF40AO75400 957 aaKnown RBP23.86■■□□□ 1.41
PTPA-204ENST00000355007 USP26Q9BXU7 913 aa23.85■■□□□ 1.41
PTPA-204ENST00000355007 MRPL50Q8N5N7 158 aaKnown RBP23.85■■□□□ 1.41
PTPA-204ENST00000355007 RBM27Q9P2N5 1060 aaKnown RBP23.85■■□□□ 1.41
PTPA-204ENST00000355007 ABCC4O15439 1325 aa23.84■■□□□ 1.41
PTPA-204ENST00000355007 A0A1W2PP64 1363 aa23.84■■□□□ 1.41
PTPA-204ENST00000355007 CHD1O14646 1710 aa23.84■■□□□ 1.41
PTPA-204ENST00000355007 PLEKHM2Q8IWE5 1019 aa23.84■■□□□ 1.41
PTPA-204ENST00000355007 CHGAP10645 457 aaKnown RBP23.83■■□□□ 1.41
PTPA-204ENST00000355007 TMEM63CQ9P1W3 806 aa23.82■■□□□ 1.4
PTPA-204ENST00000355007 UHRF1BP1LA0JNW5 1464 aa23.82■■□□□ 1.4
PTPA-204ENST00000355007 TTC22Q5TAA0 569 aa23.82■■□□□ 1.4
PTPA-204ENST00000355007 GGNBP2Q9H3C7 697 aa23.82■■□□□ 1.4
PTPA-204ENST00000355007 ST18O60284 1047 aa23.81■■□□□ 1.4
PTPA-204ENST00000355007 DIAPH1O60610 1272 aaKnown RBP23.81■■□□□ 1.4
PTPA-204ENST00000355007 ZDHHC9Q9Y397 364 aa23.81■■□□□ 1.4
PTPA-204ENST00000355007 VAMP4O75379 141 aa23.81■■□□□ 1.4
PTPA-204ENST00000355007 INTS3Q68E01 1043 aaKnown RBP23.81■■□□□ 1.4
PTPA-204ENST00000355007 CABP2Q9NPB3 220 aa23.81■■□□□ 1.4
PTPA-204ENST00000355007 CDC42BPGQ6DT37 1551 aa23.81■■□□□ 1.4
PTPA-204ENST00000355007 LRRC7Q96NW7 1537 aa23.8■■□□□ 1.4
PTPA-204ENST00000355007 PNPLA6Q8IY17 1366 aa23.8■■□□□ 1.4
PTPA-204ENST00000355007 ABCA9Q8IUA7 1624 aa23.8■■□□□ 1.4
PTPA-204ENST00000355007 SYCE3A1L190 88 aa23.8■■□□□ 1.4
PTPA-204ENST00000355007 ZGPATQ8N5A5 531 aaKnown RBP23.8■■□□□ 1.4
PTPA-204ENST00000355007 RPGRIP1LQ68CZ1 1315 aa23.79■■□□□ 1.4
PTPA-204ENST00000355007 FCHSD2O94868 740 aa23.78■■□□□ 1.4
PTPA-204ENST00000355007 MBD3O95983 291 aa23.78■■□□□ 1.4
PTPA-204ENST00000355007 FAM135BQ49AJ0 1406 aa23.77■■□□□ 1.4
PTPA-204ENST00000355007 KNDC1Q76NI1 1749 aa23.77■■□□□ 1.4
PTPA-204ENST00000355007 DCTPP1Q9H773 170 aa23.76■■□□□ 1.39
PTPA-204ENST00000355007 YEATS2Q9ULM3 1422 aa23.75■■□□□ 1.39
PTPA-204ENST00000355007 KIF24Q5T7B8 1368 aa23.75■■□□□ 1.39
PTPA-204ENST00000355007 FYB1O15117 783 aa23.75■■□□□ 1.39
PTPA-204ENST00000355007 KIAA2012Q0VF49 1180 aa23.74■■□□□ 1.39
PTPA-204ENST00000355007 NSFL1CQ9UNZ2 370 aaKnown RBP23.74■■□□□ 1.39
PTPA-204ENST00000355007 CCDC94Q9BW85 323 aaPredicted RBP23.74■■□□□ 1.39
PTPA-204ENST00000355007 ZFYVE9O95405 1425 aa23.73■■□□□ 1.39
PTPA-204ENST00000355007 CASC1Q6TDU7 716 aa23.73■■□□□ 1.39
PTPA-204ENST00000355007 TSPYL6Q8N831 410 aa23.73■■□□□ 1.39
PTPA-204ENST00000355007 CAMSAP1Q5T5Y3 1602 aa23.73■■□□□ 1.39
PTPA-204ENST00000355007 API5Q9BZZ5 524 aaKnown RBP23.72■■□□□ 1.39
PTPA-204ENST00000355007 NPATQ14207 1427 aa23.72■■□□□ 1.39
PTPA-204ENST00000355007 MYRIPQ8NFW9 859 aa23.72■■□□□ 1.39
PTPA-204ENST00000355007 PRKAR2BP31323 418 aa23.71■■□□□ 1.39
PTPA-204ENST00000355007 GNAI1P63096 354 aa23.7■■□□□ 1.38
PTPA-204ENST00000355007 RNF214Q8ND24 703 aa23.7■■□□□ 1.38
PTPA-204ENST00000355007 IFT57Q9NWB7 429 aa23.7■■□□□ 1.38
PTPA-204ENST00000355007 REC8O95072 547 aa23.7■■□□□ 1.38
PTPA-204ENST00000355007 SDSP20132 328 aa23.7■■□□□ 1.38
PTPA-204ENST00000355007 TSPY26PQ9H489 355 aa23.7■■□□□ 1.38
PTPA-204ENST00000355007 PTMAP06454 111 aaKnown RBP23.69■■□□□ 1.38
PTPA-204ENST00000355007 NFE2L2Q16236 605 aa23.69■■□□□ 1.38
PTPA-204ENST00000355007 ARID3AQ99856 593 aa23.69■■□□□ 1.38
PTPA-204ENST00000355007 TERF2IPQ9NYB0 399 aa23.69■■□□□ 1.38
PTPA-204ENST00000355007 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.69■■□□□ 1.38
PTPA-204ENST00000355007 CD163L1Q9NR16 1453 aa23.69■■□□□ 1.38
PTPA-204ENST00000355007 UTP14CQ5TAP6 766 aaKnown RBP23.69■■□□□ 1.38
PTPA-204ENST00000355007 C16orf71Q8IYS4 520 aaPredicted RBP23.69■■□□□ 1.38
PTPA-204ENST00000355007 CHAMP1Q96JM3 812 aa23.69■■□□□ 1.38
PTPA-204ENST00000355007 KIDINS220Q9ULH0 1771 aa23.69■■□□□ 1.38
PTPA-204ENST00000355007 ATAD2Q6PL18 1390 aa23.68■■□□□ 1.38
PTPA-204ENST00000355007 SRPK2P78362 688 aaKnown RBP23.68■■□□□ 1.38
PTPA-204ENST00000355007 ZNF853P0CG23 659 aa23.67■■□□□ 1.38
PTPA-204ENST00000355007 PRIMPOLQ96LW4 560 aa23.67■■□□□ 1.38
PTPA-204ENST00000355007 TWISTNBQ3B726 338 aaPredicted RBP23.66■■□□□ 1.38
PTPA-204ENST00000355007 SYAP1Q96A49 352 aaPredicted RBP23.66■■□□□ 1.38
PTPA-204ENST00000355007 MBIPQ9NS73 344 aa23.66■■□□□ 1.38
PTPA-204ENST00000355007 ATP10DQ9P241 1426 aa23.66■■□□□ 1.38
PTPA-204ENST00000355007 CFAP65Q6ZU64 1925 aaKnown RBP23.66■■□□□ 1.38
PTPA-204ENST00000355007 BRD1O95696 1058 aa23.66■■□□□ 1.38
PTPA-204ENST00000355007 DMTNQ08495 405 aa23.66■■□□□ 1.38
PTPA-204ENST00000355007 KIF20BQ96Q89 1820 aa23.65■■□□□ 1.38
PTPA-204ENST00000355007 ANKRD44Q8N8A2 993 aa23.65■■□□□ 1.38
PTPA-204ENST00000355007 OTUD7AQ8TE49 926 aaPredicted RBP23.65■■□□□ 1.38
PTPA-204ENST00000355007 THUMPD2Q9BTF0 503 aaKnown RBP23.65■■□□□ 1.38
PTPA-204ENST00000355007 ELL2O00472 640 aaPredicted RBP23.65■■□□□ 1.38
PTPA-204ENST00000355007 PODXL2Q9NZ53 605 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms