RNA–Protein interactions for RNA: ENST00000354785.8

FN1-203, Transcript of fibronectin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FN1, Length 8,905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-203ENST00000354785 CCDC184Q52MB2 194 aa13.1□□□□□ -0.31
FN1-203ENST00000354785 AEBP2Q6ZN18 517 aaPredicted RBP13.1□□□□□ -0.31
FN1-203ENST00000354785 DDX54Q8TDD1 881 aaKnown RBP13.1□□□□□ -0.31
FN1-203ENST00000354785 WWC1Q8IX03 1113 aa13.1□□□□□ -0.31
FN1-203ENST00000354785 URB2Q14146 1524 aaKnown RBP13.1□□□□□ -0.31
FN1-203ENST00000354785 ANKLE2Q86XL3 938 aa13.1□□□□□ -0.31
FN1-203ENST00000354785 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
FN1-203ENST00000354785 GPS2Q13227 327 aa13.1□□□□□ -0.31
FN1-203ENST00000354785 OLFM4Q6UX06 510 aa13.1□□□□□ -0.31
FN1-203ENST00000354785 KINO60870 393 aaKnown RBP13.09□□□□□ -0.31
FN1-203ENST00000354785 TRAK2O60296 914 aa13.09□□□□□ -0.31
FN1-203ENST00000354785 EPS15P42566 896 aa13.09□□□□□ -0.31
FN1-203ENST00000354785 CCDC61Q9Y6R9 512 aa13.09□□□□□ -0.31
FN1-203ENST00000354785 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
FN1-203ENST00000354785 KDM4AO75164 1064 aa13.09□□□□□ -0.31
FN1-203ENST00000354785 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
FN1-203ENST00000354785 EIF2AK4Q9P2K8 1649 aaKnown RBP13.09□□□□□ -0.31
FN1-203ENST00000354785 TMPOP42166 694 aaKnown RBP13.08□□□□□ -0.32
FN1-203ENST00000354785 CHD1LQ86WJ1 897 aa13.08□□□□□ -0.32
FN1-203ENST00000354785 FCHSD2O94868 740 aa13.08□□□□□ -0.32
FN1-203ENST00000354785 TTC39AQ5SRH9 613 aa13.08□□□□□ -0.32
FN1-203ENST00000354785 SPG7Q9UQ90 795 aa13.08□□□□□ -0.32
FN1-203ENST00000354785 MYO5CQ9NQX4 1742 aa13.08□□□□□ -0.32
FN1-203ENST00000354785 SLC3A2P08195 630 aaKnown RBP13.08□□□□□ -0.32
FN1-203ENST00000354785 CCDC158Q5M9N0 1113 aa13.08□□□□□ -0.32
FN1-203ENST00000354785 FAM43AQ8N2R8 423 aa13.08□□□□□ -0.32
FN1-203ENST00000354785 MAP4K4O95819 1239 aaPredicted RBP13.08□□□□□ -0.32
FN1-203ENST00000354785 IKQ13123 557 aaPredicted RBP13.08□□□□□ -0.32
FN1-203ENST00000354785 RNF214Q8ND24 703 aa13.07□□□□□ -0.32
FN1-203ENST00000354785 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.07□□□□□ -0.32
FN1-203ENST00000354785 FANCAO15360 1455 aa13.07□□□□□ -0.32
FN1-203ENST00000354785 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
FN1-203ENST00000354785 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.07□□□□□ -0.32
FN1-203ENST00000354785 NCOA1Q15788 1441 aa13.07□□□□□ -0.32
FN1-203ENST00000354785 RPRD2Q5VT52 1461 aaKnown RBP13.07□□□□□ -0.32
FN1-203ENST00000354785 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
FN1-203ENST00000354785 NUDT16Q96DE0 195 aaKnown RBP13.07□□□□□ -0.32
FN1-203ENST00000354785 SRCIN1Q9C0H9 1055 aa13.07□□□□□ -0.32
FN1-203ENST00000354785 XPCQ01831 940 aaPredicted RBP13.06□□□□□ -0.32
FN1-203ENST00000354785 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
FN1-203ENST00000354785 NAP1L1P55209 391 aaKnown RBP13.06□□□□□ -0.32
FN1-203ENST00000354785 BACH2Q9BYV9 841 aa13.06□□□□□ -0.32
FN1-203ENST00000354785 CEBPZQ03701 1054 aaKnown RBP13.06□□□□□ -0.32
FN1-203ENST00000354785 FIBPO43427 364 aa13.06□□□□□ -0.32
FN1-203ENST00000354785 MBD3O95983 291 aa13.06□□□□□ -0.32
FN1-203ENST00000354785 WAPLQ7Z5K2 1190 aa13.06□□□□□ -0.32
FN1-203ENST00000354785 PRDM11Q9NQV5 511 aa13.06□□□□□ -0.32
FN1-203ENST00000354785 GNL3LQ9NVN8 582 aaKnown RBP13.06□□□□□ -0.32
FN1-203ENST00000354785 FAM13BQ9NYF5 915 aa13.06□□□□□ -0.32
FN1-203ENST00000354785 MPHOSPH8Q99549 860 aa13.05□□□□□ -0.32
FN1-203ENST00000354785 FKBP4Q02790 459 aaKnown RBP eCLIP13.05□□□□□ -0.32
FN1-203ENST00000354785 LETM1O95202 739 aaPredicted RBP13.05□□□□□ -0.32
FN1-203ENST00000354785 NFE2L2Q16236 605 aa13.05□□□□□ -0.32
FN1-203ENST00000354785 CYP46A1Q9Y6A2 500 aa13.05□□□□□ -0.32
FN1-203ENST00000354785 PRPF40AO75400 957 aaKnown RBP13.05□□□□□ -0.32
FN1-203ENST00000354785 MRE11P49959 708 aa13.05□□□□□ -0.32
FN1-203ENST00000354785 ANKRD1Q15327 319 aa13.05□□□□□ -0.32
FN1-203ENST00000354785 TRIM5Q9C035 493 aa13.04□□□□□ -0.32
FN1-203ENST00000354785 AACSQ86V21 672 aa13.04□□□□□ -0.32
FN1-203ENST00000354785 MIS18AQ9NYP9 233 aa13.04□□□□□ -0.32
FN1-203ENST00000354785 PDILTQ8N807 584 aa13.04□□□□□ -0.32
FN1-203ENST00000354785 TMEM57Q8N5G2 664 aa13.03□□□□□ -0.32
FN1-203ENST00000354785 ATP2B1P20020 1258 aa13.03□□□□□ -0.32
FN1-203ENST00000354785 UGGT2Q9NYU1 1516 aa13.03□□□□□ -0.32
FN1-203ENST00000354785 ZNF608Q9ULD9 1512 aaPredicted RBP13.03□□□□□ -0.32
FN1-203ENST00000354785 SLFN5Q08AF3 891 aa13.03□□□□□ -0.32
FN1-203ENST00000354785 STK3Q13188 491 aa13.03□□□□□ -0.32
FN1-203ENST00000354785 CWC27Q6UX04 472 aaKnown RBP13.03□□□□□ -0.32
FN1-203ENST00000354785 BCL11BQ9C0K0 894 aaPredicted RBP13.03□□□□□ -0.32
FN1-203ENST00000354785 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
FN1-203ENST00000354785 TXLNAP40222 546 aa13.02□□□□□ -0.32
FN1-203ENST00000354785 CCDC39Q9UFE4 941 aa13.02□□□□□ -0.32
FN1-203ENST00000354785 ZNF396Q96N95 335 aaPredicted RBP13.02□□□□□ -0.33
FN1-203ENST00000354785 SYCP2Q9BX26 1530 aa13.02□□□□□ -0.33
FN1-203ENST00000354785 K7ELQ4 463 aaPredicted RBP13.02□□□□□ -0.33
FN1-203ENST00000354785 STK11IPQ8N1F8 1099 aa13.02□□□□□ -0.33
FN1-203ENST00000354785 PHF23Q9BUL5 403 aaPredicted RBP13.02□□□□□ -0.33
FN1-203ENST00000354785 MCM10Q7L590 875 aa13.02□□□□□ -0.33
FN1-203ENST00000354785 FMNL2Q96PY5 1086 aa13.02□□□□□ -0.33
FN1-203ENST00000354785 C11orf95C9JLR9 678 aaPredicted RBP13.01□□□□□ -0.33
FN1-203ENST00000354785 NUTM2BA6NNL0 878 aaPredicted RBP13.01□□□□□ -0.33
FN1-203ENST00000354785 NUTM2EB1AL46 878 aaPredicted RBP13.01□□□□□ -0.33
FN1-203ENST00000354785 NUTM2AQ8IVF1 878 aaPredicted RBP13.01□□□□□ -0.33
FN1-203ENST00000354785 DUOX2Q9NRD8 1548 aa13.01□□□□□ -0.33
FN1-203ENST00000354785 CT47A1Q5JQC4 288 aaPredicted RBP13.01□□□□□ -0.33
FN1-203ENST00000354785 TSPY26PQ9H489 355 aa13.01□□□□□ -0.33
FN1-203ENST00000354785 SMC2O95347 1197 aa13□□□□□ -0.33
FN1-203ENST00000354785 SCAF11Q99590 1463 aaKnown RBP13□□□□□ -0.33
FN1-203ENST00000354785 THUMPD2Q9BTF0 503 aaKnown RBP13□□□□□ -0.33
FN1-203ENST00000354785 ATP2B2Q01814 1243 aa13□□□□□ -0.33
FN1-203ENST00000354785 TEX35Q5T0J7 233 aa13□□□□□ -0.33
FN1-203ENST00000354785 OFD1O75665 1012 aa13□□□□□ -0.33
FN1-203ENST00000354785 CDK5RAP3Q96JB5 506 aa13□□□□□ -0.33
FN1-203ENST00000354785 NACAP1Q9BZK3 213 aa13□□□□□ -0.33
FN1-203ENST00000354785 ZC3H6P61129 1189 aaKnown RBP13□□□□□ -0.33
FN1-203ENST00000354785 ZNF771Q7L3S4 317 aaPredicted RBP13□□□□□ -0.33
FN1-203ENST00000354785 KDM5BQ9UGL1 1544 aa13□□□□□ -0.33
FN1-203ENST00000354785 ME1P48163 572 aa12.99□□□□□ -0.33
FN1-203ENST00000354785 AK9Q5TCS8 1911 aa12.99□□□□□ -0.33
FN1-203ENST00000354785 TRIM22Q8IYM9 498 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms