RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 CDK12Q9NYV4 1490 aaPredicted RBP32.68■■■□□ 2.82
HMGA2-201ENST00000354636 FAM83GA6ND36 823 aa32.67■■■□□ 2.82
HMGA2-201ENST00000354636 CHRNA2Q15822 529 aa32.67■■■□□ 2.82
HMGA2-201ENST00000354636 ABCC6O95255 1503 aa32.66■■■□□ 2.82
HMGA2-201ENST00000354636 INSRP06213 1382 aa32.65■■■□□ 2.82
HMGA2-201ENST00000354636 MEX3CQ5U5Q3 659 aaKnown RBP32.65■■■□□ 2.82
HMGA2-201ENST00000354636 LMO7Q8WWI1 1683 aa32.64■■■□□ 2.82
HMGA2-201ENST00000354636 HSP90AB2PQ58FF8 381 aa32.64■■■□□ 2.82
HMGA2-201ENST00000354636 AXIN2Q9Y2T1 843 aa32.64■■■□□ 2.82
HMGA2-201ENST00000354636 COL14A1Q05707 1796 aaKnown RBP32.63■■■□□ 2.81
HMGA2-201ENST00000354636 CCDC184Q52MB2 194 aa32.62■■■□□ 2.81
HMGA2-201ENST00000354636 BLMP54132 1417 aaPredicted RBP32.62■■■□□ 2.81
HMGA2-201ENST00000354636 CFAP53Q96M91 514 aa32.61■■■□□ 2.81
HMGA2-201ENST00000354636 RGPD5Q99666 1765 aa32.6■■■□□ 2.81
HMGA2-201ENST00000354636 COL3A1P02461 1466 aaPredicted RBP32.6■■■□□ 2.81
HMGA2-201ENST00000354636 CCER2I3L3R5 266 aa32.6■■■□□ 2.81
HMGA2-201ENST00000354636 CAMTA1Q9Y6Y1 1673 aa32.6■■■□□ 2.81
HMGA2-201ENST00000354636 C8orf37Q96NL8 207 aa32.59■■■□□ 2.81
HMGA2-201ENST00000354636 NGLY1Q96IV0 654 aa32.56■■■□□ 2.8
HMGA2-201ENST00000354636 PLCH1Q4KWH8 1693 aa32.55■■■□□ 2.8
HMGA2-201ENST00000354636 MRS2Q9HD23 443 aa32.55■■■□□ 2.8
HMGA2-201ENST00000354636 BTG4Q9NY30 223 aa32.55■■■□□ 2.8
HMGA2-201ENST00000354636 DIAPH1O60610 1272 aaKnown RBP32.54■■■□□ 2.8
HMGA2-201ENST00000354636 EIF4A2Q14240 407 aaKnown RBP32.54■■■□□ 2.8
HMGA2-201ENST00000354636 SLIT2O94813 1529 aa32.53■■■□□ 2.8
HMGA2-201ENST00000354636 ERBB3P21860 1342 aa32.53■■■□□ 2.8
HMGA2-201ENST00000354636 IL13P35225 146 aa32.52■■■□□ 2.8
HMGA2-201ENST00000354636 ANKRD24Q8TF21 1146 aa32.52■■■□□ 2.8
HMGA2-201ENST00000354636 COL5A2P05997 1499 aaPredicted RBP32.52■■■□□ 2.8
HMGA2-201ENST00000354636 NWD2Q9ULI1 1742 aa32.51■■■□□ 2.8
HMGA2-201ENST00000354636 FNBP4Q8N3X1 1017 aaPredicted RBP32.51■■■□□ 2.79
HMGA2-201ENST00000354636 LTV1Q96GA3 475 aaPredicted RBP32.51■■■□□ 2.79
HMGA2-201ENST00000354636 EVA1CP58658 441 aa32.48■■■□□ 2.79
HMGA2-201ENST00000354636 NRAPQ86VF7 1730 aa32.47■■■□□ 2.79
HMGA2-201ENST00000354636 STRN4Q9NRL3 753 aa32.46■■■□□ 2.79
HMGA2-201ENST00000354636 NUDCQ9Y266 331 aa32.46■■■□□ 2.79
HMGA2-201ENST00000354636 WDR17Q8IZU2 1322 aa32.45■■■□□ 2.79
HMGA2-201ENST00000354636 BCL9LQ86UU0 1499 aa32.44■■■□□ 2.78
HMGA2-201ENST00000354636 CSB-PGBD3P0DP91 1061 aa32.44■■■□□ 2.78
HMGA2-201ENST00000354636 PNISRQ8TF01 805 aaKnown RBP32.44■■■□□ 2.78
HMGA2-201ENST00000354636 FAM208AQ9UK61 1670 aaKnown RBP32.43■■■□□ 2.78
HMGA2-201ENST00000354636 EYA1Q99502 592 aa32.43■■■□□ 2.78
HMGA2-201ENST00000354636 RGPD1P0DJD0 1748 aa32.43■■■□□ 2.78
HMGA2-201ENST00000354636 UNC5CLQ8IV45 518 aa32.42■■■□□ 2.78
HMGA2-201ENST00000354636 RGPD2P0DJD1 1756 aa32.42■■■□□ 2.78
HMGA2-201ENST00000354636 NBPF6Q5VWK0 638 aa32.41■■■□□ 2.78
HMGA2-201ENST00000354636 NBPF4Q96M43 638 aa32.41■■■□□ 2.78
HMGA2-201ENST00000354636 AFF2P51816 1311 aa32.41■■■□□ 2.78
HMGA2-201ENST00000354636 U2SURPO15042 1029 aaKnown RBP32.41■■■□□ 2.78
HMGA2-201ENST00000354636 LARP1Q6PKG0 1096 aaKnown RBP32.41■■■□□ 2.78
HMGA2-201ENST00000354636 USP21Q9UK80 565 aa32.41■■■□□ 2.78
HMGA2-201ENST00000354636 IGSF1Q8N6C5 1336 aa32.4■■■□□ 2.78
HMGA2-201ENST00000354636 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.39■■■□□ 2.78
HMGA2-201ENST00000354636 TOM1L2Q6ZVM7 507 aa32.38■■■□□ 2.77
HMGA2-201ENST00000354636 CRB1P82279 1406 aa32.38■■■□□ 2.77
HMGA2-201ENST00000354636 WDR43Q15061 677 aaKnown RBP eCLIP32.37■■■□□ 2.77
HMGA2-201ENST00000354636 NLRP2Q9NX02 1062 aa32.37■■■□□ 2.77
HMGA2-201ENST00000354636 U2AF1L5P0DN76 240 aaPredicted RBP32.36■■■□□ 2.77
HMGA2-201ENST00000354636 U2AF1Q01081 240 aaKnown RBP eCLIP32.36■■■□□ 2.778e-8■■□□□ 13.6
HMGA2-201ENST00000354636 NCAPD2Q15021 1401 aa32.36■■■□□ 2.77
HMGA2-201ENST00000354636 CARD10Q9BWT7 1032 aa32.36■■■□□ 2.77
HMGA2-201ENST00000354636 ADAMTS8Q9UP79 889 aa32.34■■■□□ 2.77
HMGA2-201ENST00000354636 CCDC9Q9Y3X0 531 aaKnown RBP32.34■■■□□ 2.77
HMGA2-201ENST00000354636 SULT6B1Q6IMI4 303 aa32.33■■■□□ 2.77
HMGA2-201ENST00000354636 USHBP1Q8N6Y0 703 aa32.33■■■□□ 2.77
HMGA2-201ENST00000354636 KDRP35968 1356 aa32.33■■■□□ 2.77
HMGA2-201ENST00000354636 VPS72Q15906 364 aa32.32■■■□□ 2.76
HMGA2-201ENST00000354636 PHF23Q9BUL5 403 aaPredicted RBP32.32■■■□□ 2.76
HMGA2-201ENST00000354636 HMOX1P09601 288 aa32.31■■■□□ 2.76
HMGA2-201ENST00000354636 AEBP1Q8IUX7 1158 aa32.31■■■□□ 2.76
HMGA2-201ENST00000354636 FAM9BQ8IZU0 186 aa32.31■■■□□ 2.76
HMGA2-201ENST00000354636 USP35Q9P2H5 1018 aa32.3■■■□□ 2.76
HMGA2-201ENST00000354636 SPATA31A5Q5VU36 1347 aa32.29■■■□□ 2.76
HMGA2-201ENST00000354636 SPATA31A7Q8IWB4 1347 aa32.29■■■□□ 2.76
HMGA2-201ENST00000354636 FCHSD2O94868 740 aa32.29■■■□□ 2.76
HMGA2-201ENST00000354636 SPATA31A1Q5TZJ5 1347 aa32.29■■■□□ 2.76
HMGA2-201ENST00000354636 RSPH6AQ9H0K4 717 aa32.28■■■□□ 2.76
HMGA2-201ENST00000354636 ZNF772Q68DY9 489 aaPredicted RBP32.27■■■□□ 2.76
HMGA2-201ENST00000354636 ATRNO75882 1429 aa32.27■■■□□ 2.76
HMGA2-201ENST00000354636 TRPC5Q9UL62 973 aaPredicted RBP32.26■■■□□ 2.76
HMGA2-201ENST00000354636 QTRT2Q9H974 415 aaKnown RBP32.25■■■□□ 2.75
HMGA2-201ENST00000354636 TCP11L2Q8N4U5 519 aa32.24■■■□□ 2.75
HMGA2-201ENST00000354636 THRAP3Q9Y2W1 955 aaKnown RBP32.24■■■□□ 2.75
HMGA2-201ENST00000354636 PRKAR2BP31323 418 aa32.21■■■□□ 2.75
HMGA2-201ENST00000354636 GJD4Q96KN9 370 aaPredicted RBP32.21■■■□□ 2.75
HMGA2-201ENST00000354636 PLEKHF1Q96S99 279 aa32.21■■■□□ 2.75
HMGA2-201ENST00000354636 PNNQ9H307 717 aaKnown RBP32.21■■■□□ 2.75
HMGA2-201ENST00000354636 RAPGEF4Q8WZA2 1011 aa32.2■■■□□ 2.74
HMGA2-201ENST00000354636 RGS17Q9UGC6 210 aaPredicted RBP32.2■■■□□ 2.74
HMGA2-201ENST00000354636 GLI3P10071 1580 aa32.18■■■□□ 2.74
HMGA2-201ENST00000354636 MEGF6O75095 1541 aa32.18■■■□□ 2.74
HMGA2-201ENST00000354636 BARGINQ6ZT62 677 aa32.18■■■□□ 2.74
HMGA2-201ENST00000354636 DISP2A7MBM2 1401 aa32.17■■■□□ 2.74
HMGA2-201ENST00000354636 IL2RBP14784 551 aa32.17■■■□□ 2.74
HMGA2-201ENST00000354636 CCDC146Q8IYE0 955 aa32.16■■■□□ 2.74
HMGA2-201ENST00000354636 RUNDC1Q96C34 613 aa32.16■■■□□ 2.74
HMGA2-201ENST00000354636 WNK3Q9BYP7 1800 aa32.16■■■□□ 2.74
HMGA2-201ENST00000354636 TATP17735 454 aaPredicted RBP32.16■■■□□ 2.74
HMGA2-201ENST00000354636 PLEKHG2Q9H7P9 1386 aa32.15■■■□□ 2.74
HMGA2-201ENST00000354636 PHACTR3Q96KR7 559 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms