RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 KIF20BQ96Q89 1820 aa24.61■■□□□ 1.53
COL13A1-201ENST00000354547 ZMYM3Q14202 1370 aa24.6■■□□□ 1.53
COL13A1-201ENST00000354547 ZBTB7BO15156 539 aaPredicted RBP24.59■■□□□ 1.53
COL13A1-201ENST00000354547 PLPPR3Q6T4P5 718 aa24.58■■□□□ 1.53
COL13A1-201ENST00000354547 CCDC61Q9Y6R9 512 aa24.58■■□□□ 1.53
COL13A1-201ENST00000354547 AEBP1Q8IUX7 1158 aa24.58■■□□□ 1.52
COL13A1-201ENST00000354547 CALD1Q05682 793 aaKnown RBP24.57■■□□□ 1.52
COL13A1-201ENST00000354547 IFT57Q9NWB7 429 aa24.57■■□□□ 1.52
COL13A1-201ENST00000354547 GZF1Q9H116 711 aaPredicted RBP24.56■■□□□ 1.52
COL13A1-201ENST00000354547 ATP7BP35670 1465 aa24.56■■□□□ 1.52
COL13A1-201ENST00000354547 KRT24Q2M2I5 525 aa24.56■■□□□ 1.52
COL13A1-201ENST00000354547 EDC4Q6P2E9 1401 aaKnown RBP24.54■■□□□ 1.52
COL13A1-201ENST00000354547 HSCBQ8IWL3 235 aa24.53■■□□□ 1.52
COL13A1-201ENST00000354547 SULT6B1Q6IMI4 303 aa24.53■■□□□ 1.52
COL13A1-201ENST00000354547 SIRT2Q8IXJ6 389 aa24.53■■□□□ 1.52
COL13A1-201ENST00000354547 CFAP44Q96MT7 982 aa24.52■■□□□ 1.52
COL13A1-201ENST00000354547 CPSF1Q10570 1443 aaKnown RBP24.52■■□□□ 1.52
COL13A1-201ENST00000354547 ZNF428Q96B54 188 aa24.51■■□□□ 1.51
COL13A1-201ENST00000354547 CPS1P31327 1500 aa24.51■■□□□ 1.51
COL13A1-201ENST00000354547 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.51■■□□□ 1.51
COL13A1-201ENST00000354547 PRR36Q9H6K5 1346 aa24.51■■□□□ 1.51
COL13A1-201ENST00000354547 ZNF853P0CG23 659 aa24.51■■□□□ 1.51
COL13A1-201ENST00000354547 MCM10Q7L590 875 aa24.51■■□□□ 1.51
COL13A1-201ENST00000354547 PPP6R1Q9UPN7 881 aa24.5■■□□□ 1.51
COL13A1-201ENST00000354547 FOXD4L1Q9NU39 408 aa24.5■■□□□ 1.51
COL13A1-201ENST00000354547 APBB1O00213 710 aa24.49■■□□□ 1.51
COL13A1-201ENST00000354547 LMOD3Q0VAK6 560 aa24.48■■□□□ 1.51
COL13A1-201ENST00000354547 DLC1Q96QB1 1528 aa24.48■■□□□ 1.51
COL13A1-201ENST00000354547 ARHGAP45Q92619 1136 aa24.48■■□□□ 1.51
COL13A1-201ENST00000354547 BRPF1P55201 1214 aaPredicted RBP24.47■■□□□ 1.51
COL13A1-201ENST00000354547 EIF4A2Q14240 407 aaKnown RBP24.47■■□□□ 1.51
COL13A1-201ENST00000354547 CDC42BPGQ6DT37 1551 aa24.47■■□□□ 1.51
COL13A1-201ENST00000354547 GCC1Q96CN9 775 aa24.47■■□□□ 1.51
COL13A1-201ENST00000354547 CHMP5Q9NZZ3 219 aa24.47■■□□□ 1.51
COL13A1-201ENST00000354547 HSP90AB2PQ58FF8 381 aa24.46■■□□□ 1.51
COL13A1-201ENST00000354547 MIS18AQ9NYP9 233 aa24.46■■□□□ 1.51
COL13A1-201ENST00000354547 MCM4P33991 863 aa24.45■■□□□ 1.51
COL13A1-201ENST00000354547 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.5
COL13A1-201ENST00000354547 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.5
COL13A1-201ENST00000354547 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.5
COL13A1-201ENST00000354547 BMP2KLQ5H9B9 411 aa24.45■■□□□ 1.5
COL13A1-201ENST00000354547 CHMP4BQ9H444 224 aaKnown RBP24.45■■□□□ 1.5
COL13A1-201ENST00000354547 ABCC4O15439 1325 aa24.44■■□□□ 1.5
COL13A1-201ENST00000354547 SLC26A8Q96RN1 970 aa24.44■■□□□ 1.5
COL13A1-201ENST00000354547 API5Q9BZZ5 524 aaKnown RBP24.44■■□□□ 1.5
COL13A1-201ENST00000354547 DIP2BQ9P265 1576 aa24.44■■□□□ 1.5
COL13A1-201ENST00000354547 CDK12Q9NYV4 1490 aaPredicted RBP24.44■■□□□ 1.5
COL13A1-201ENST00000354547 SPATA31D1Q6ZQQ2 1576 aa24.44■■□□□ 1.5
COL13A1-201ENST00000354547 ACEP12821 1306 aa24.44■■□□□ 1.5
COL13A1-201ENST00000354547 HSP90AB1P08238 724 aaKnown RBP24.43■■□□□ 1.5
COL13A1-201ENST00000354547 TBC1D9Q6ZT07 1266 aa24.43■■□□□ 1.5
COL13A1-201ENST00000354547 HDGFP51858 240 aaKnown RBP24.43■■□□□ 1.5
COL13A1-201ENST00000354547 RBM42Q9BTD8 480 aaKnown RBP24.43■■□□□ 1.5
COL13A1-201ENST00000354547 ZNF692Q9BU19 519 aaPredicted RBP24.43■■□□□ 1.5
COL13A1-201ENST00000354547 AATKQ6ZMQ8 1374 aa24.42■■□□□ 1.5
COL13A1-201ENST00000354547 HSP90AA1P07900 732 aaKnown RBP24.42■■□□□ 1.5
COL13A1-201ENST00000354547 ROBO2Q9HCK4 1378 aa24.42■■□□□ 1.5
COL13A1-201ENST00000354547 PTCH1Q13635 1447 aa24.42■■□□□ 1.5
COL13A1-201ENST00000354547 C16orf71Q8IYS4 520 aaPredicted RBP24.42■■□□□ 1.5
COL13A1-201ENST00000354547 TTC21BQ7Z4L5 1316 aa24.41■■□□□ 1.5
COL13A1-201ENST00000354547 SETD1AO15047 1707 aaKnown RBP24.41■■□□□ 1.5
COL13A1-201ENST00000354547 ANO8Q9HCE9 1232 aaPredicted RBP24.4■■□□□ 1.5
COL13A1-201ENST00000354547 RBM25P49756 843 aaKnown RBP24.4■■□□□ 1.5
COL13A1-201ENST00000354547 AGLP35573 1532 aa24.39■■□□□ 1.5
COL13A1-201ENST00000354547 NRXN3Q9Y4C0 1643 aa24.39■■□□□ 1.49
COL13A1-201ENST00000354547 CD2BP2O95400 341 aaKnown RBP24.39■■□□□ 1.49
COL13A1-201ENST00000354547 CEBPAP49715 358 aaPredicted RBP24.39■■□□□ 1.49
COL13A1-201ENST00000354547 FOXO3O43524 673 aa24.38■■□□□ 1.49
COL13A1-201ENST00000354547 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.38■■□□□ 1.49
COL13A1-201ENST00000354547 DLG5Q8TDM6 1919 aa24.38■■□□□ 1.49
COL13A1-201ENST00000354547 PIK3R4Q99570 1358 aa24.37■■□□□ 1.49
COL13A1-201ENST00000354547 LTKP29376 864 aa24.37■■□□□ 1.49
COL13A1-201ENST00000354547 TRAK2O60296 914 aa24.36■■□□□ 1.49
COL13A1-201ENST00000354547 TNRQ92752 1358 aa24.36■■□□□ 1.49
COL13A1-201ENST00000354547 SMARCA5O60264 1052 aaPredicted RBP24.36■■□□□ 1.49
COL13A1-201ENST00000354547 OTUD7AQ8TE49 926 aaPredicted RBP24.36■■□□□ 1.49
COL13A1-201ENST00000354547 SLC4A10Q6U841 1118 aa24.35■■□□□ 1.49
COL13A1-201ENST00000354547 KIF2CQ99661 725 aa24.35■■□□□ 1.49
COL13A1-201ENST00000354547 GSPT1P15170 499 aaKnown RBP24.35■■□□□ 1.49
COL13A1-201ENST00000354547 SLC4A2P04920 1241 aa24.33■■□□□ 1.49
COL13A1-201ENST00000354547 PLEKHM2Q8IWE5 1019 aa24.33■■□□□ 1.49
COL13A1-201ENST00000354547 MEIS3Q99687 375 aa24.32■■□□□ 1.48
COL13A1-201ENST00000354547 TMEM2Q9UHN6 1383 aa24.32■■□□□ 1.48
COL13A1-201ENST00000354547 CHL1O00533 1208 aa24.32■■□□□ 1.48
COL13A1-201ENST00000354547 CDC45O75419 566 aa24.32■■□□□ 1.48
COL13A1-201ENST00000354547 GOLGA6L3A6NEY3 463 aa24.31■■□□□ 1.48
COL13A1-201ENST00000354547 F6X3S4 739 aa24.31■■□□□ 1.48
COL13A1-201ENST00000354547 NUTM2GQ5VZR2 741 aa24.31■■□□□ 1.48
COL13A1-201ENST00000354547 DCTPP1Q9H773 170 aa24.31■■□□□ 1.48
COL13A1-201ENST00000354547 L1TD1Q5T7N2 865 aaKnown RBP24.3■■□□□ 1.48
COL13A1-201ENST00000354547 NECTIN2Q92692 538 aa24.3■■□□□ 1.48
COL13A1-201ENST00000354547 TNPO1Q92973 898 aaKnown RBP24.3■■□□□ 1.48
COL13A1-201ENST00000354547 SNX21Q969T3 373 aa24.3■■□□□ 1.48
COL13A1-201ENST00000354547 INTS3Q68E01 1043 aaKnown RBP24.29■■□□□ 1.48
COL13A1-201ENST00000354547 SIRT1Q96EB6 747 aa24.29■■□□□ 1.48
COL13A1-201ENST00000354547 REREQ9P2R6 1566 aa24.29■■□□□ 1.48
COL13A1-201ENST00000354547 NGDNQ8NEJ9 315 aaKnown RBP24.29■■□□□ 1.48
COL13A1-201ENST00000354547 MSH6P52701 1360 aa24.28■■□□□ 1.48
COL13A1-201ENST00000354547 RTF1Q92541 710 aaKnown RBP24.28■■□□□ 1.48
COL13A1-201ENST00000354547 PANK2Q9BZ23 570 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms