RNA–Protein interactions for RNA: ENST00000350033.7

COPS7B-201, Transcript of COP9 signalosome subunit 7B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7B, Length 2,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-201ENST00000350033 FTSJ3Q8IY81 847 aaKnown RBP17.13■□□□□ 0.33
COPS7B-201ENST00000350033 NOB1Q9ULX3 412 aaKnown RBP17.13■□□□□ 0.33
COPS7B-201ENST00000350033 AMOTL2Q9Y2J4 779 aa17.13■□□□□ 0.33
COPS7B-201ENST00000350033 TRIM27P14373 513 aa17.13■□□□□ 0.33
COPS7B-201ENST00000350033 FAM161AQ3B820 660 aa17.13■□□□□ 0.33
COPS7B-201ENST00000350033 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
COPS7B-201ENST00000350033 DZIP1LQ8IYY4 767 aaKnown RBP17.12■□□□□ 0.33
COPS7B-201ENST00000350033 PNNQ9H307 717 aaKnown RBP17.12■□□□□ 0.33
COPS7B-201ENST00000350033 EID1Q9Y6B2 187 aa17.12■□□□□ 0.33
COPS7B-201ENST00000350033 MVPQ14764 893 aaKnown RBP17.12■□□□□ 0.33
COPS7B-201ENST00000350033 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
COPS7B-201ENST00000350033 FAM83GA6ND36 823 aa17.11■□□□□ 0.33
COPS7B-201ENST00000350033 IL16Q14005 1332 aa17.11■□□□□ 0.33
COPS7B-201ENST00000350033 TTC21BQ7Z4L5 1316 aa17.11■□□□□ 0.33
COPS7B-201ENST00000350033 ELL2O00472 640 aaPredicted RBP17.1■□□□□ 0.33
COPS7B-201ENST00000350033 DCTN1Q14203 1278 aa17.1■□□□□ 0.33
COPS7B-201ENST00000350033 AEBP1Q8IUX7 1158 aa17.1■□□□□ 0.33
COPS7B-201ENST00000350033 FER1L4A9Z1Z3 1794 aa17.1■□□□□ 0.33
COPS7B-201ENST00000350033 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
COPS7B-201ENST00000350033 CDK12Q9NYV4 1490 aaPredicted RBP17.1■□□□□ 0.33
COPS7B-201ENST00000350033 ITPRIPQ8IWB1 547 aa17.09■□□□□ 0.33
COPS7B-201ENST00000350033 AATKQ6ZMQ8 1374 aa17.09■□□□□ 0.33
COPS7B-201ENST00000350033 SLC4A3P48751 1232 aa17.09■□□□□ 0.33
COPS7B-201ENST00000350033 TSPYL6Q8N831 410 aa17.09■□□□□ 0.33
COPS7B-201ENST00000350033 CT47B1P0C2W7 299 aaPredicted RBP17.08■□□□□ 0.32
COPS7B-201ENST00000350033 DLG5Q8TDM6 1919 aa17.08■□□□□ 0.32
COPS7B-201ENST00000350033 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
COPS7B-201ENST00000350033 TMEM57Q8N5G2 664 aa17.07■□□□□ 0.32
COPS7B-201ENST00000350033 RGPD8O14715 1765 aaPredicted RBP17.07■□□□□ 0.32
COPS7B-201ENST00000350033 EIF4A2Q14240 407 aaKnown RBP17.07■□□□□ 0.32
COPS7B-201ENST00000350033 PDZRN3Q9UPQ7 1066 aa17.06■□□□□ 0.32
COPS7B-201ENST00000350033 TOPAZ1Q8N9V7 1692 aa17.06■□□□□ 0.32
COPS7B-201ENST00000350033 HSP90AB2PQ58FF8 381 aa17.06■□□□□ 0.32
COPS7B-201ENST00000350033 NRKQ7Z2Y5 1582 aa17.05■□□□□ 0.32
COPS7B-201ENST00000350033 PLEKHG3A1L390 1219 aa17.05■□□□□ 0.32
COPS7B-201ENST00000350033 SEC24BO95487 1268 aa17.05■□□□□ 0.32
COPS7B-201ENST00000350033 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
COPS7B-201ENST00000350033 USP6P35125 1406 aa17.05■□□□□ 0.32
COPS7B-201ENST00000350033 SULT6B1Q6IMI4 303 aa17.05■□□□□ 0.32
COPS7B-201ENST00000350033 RBM33Q96EV2 1170 aaKnown RBP17.04■□□□□ 0.32
COPS7B-201ENST00000350033 ARHGAP23Q9P227 1491 aa17.04■□□□□ 0.32
COPS7B-201ENST00000350033 SLIT1O75093 1534 aa17.03■□□□□ 0.32
COPS7B-201ENST00000350033 PEAK1Q9H792 1746 aa17.03■□□□□ 0.32
COPS7B-201ENST00000350033 THEMISQ8N1K5 641 aaPredicted RBP17.03■□□□□ 0.32
COPS7B-201ENST00000350033 RWDD1Q9H446 243 aaPredicted RBP17.03■□□□□ 0.32
COPS7B-201ENST00000350033 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
COPS7B-201ENST00000350033 OVOS2A0A0J9YW53 1432 aa17.02■□□□□ 0.32
COPS7B-201ENST00000350033 OVOS2Q6IE36 1432 aa17.02■□□□□ 0.32
COPS7B-201ENST00000350033 VAMP4O75379 141 aa17.02■□□□□ 0.32
COPS7B-201ENST00000350033 NUTM2GQ5VZR2 741 aa17.02■□□□□ 0.32
COPS7B-201ENST00000350033 RRP9O43818 475 aaKnown RBP17.02■□□□□ 0.31
COPS7B-201ENST00000350033 NGDNQ8NEJ9 315 aaKnown RBP17.02■□□□□ 0.31
COPS7B-201ENST00000350033 KCNA6P17658 529 aa17.01■□□□□ 0.31
COPS7B-201ENST00000350033 C8orf58Q8NAV2 365 aa17.01■□□□□ 0.31
COPS7B-201ENST00000350033 ZNF853P0CG23 659 aa17■□□□□ 0.31
COPS7B-201ENST00000350033 GNAI1P63096 354 aa17■□□□□ 0.31
COPS7B-201ENST00000350033 IFT57Q9NWB7 429 aa17■□□□□ 0.31
COPS7B-201ENST00000350033 DDX19BQ9UMR2 479 aa17■□□□□ 0.31
COPS7B-201ENST00000350033 DIP2AQ14689 1571 aa16.99■□□□□ 0.31
COPS7B-201ENST00000350033 KIF16BQ96L93 1317 aa16.99■□□□□ 0.31
COPS7B-201ENST00000350033 AAMPQ13685 434 aa16.99■□□□□ 0.31
COPS7B-201ENST00000350033 KRT24Q2M2I5 525 aa16.99■□□□□ 0.31
COPS7B-201ENST00000350033 MCM10Q7L590 875 aa16.99■□□□□ 0.31
COPS7B-201ENST00000350033 NFKBIBQ15653 356 aa16.99■□□□□ 0.31
COPS7B-201ENST00000350033 ALDH1L2Q3SY69 923 aa16.99■□□□□ 0.31
COPS7B-201ENST00000350033 MRPL50Q8N5N7 158 aaKnown RBP16.99■□□□□ 0.31
COPS7B-201ENST00000350033 SSH2Q76I76 1423 aa16.98■□□□□ 0.31
COPS7B-201ENST00000350033 MAP3K19Q56UN5 1328 aa16.98■□□□□ 0.31
COPS7B-201ENST00000350033 HSP90AA2PQ14568 343 aaPredicted RBP16.98■□□□□ 0.31
COPS7B-201ENST00000350033 C1orf115Q9H7X2 142 aa16.98■□□□□ 0.31
COPS7B-201ENST00000350033 VIRMAQ69YN4 1812 aaKnown RBP16.98■□□□□ 0.31
COPS7B-201ENST00000350033 USP19O94966 1318 aa16.97■□□□□ 0.31
COPS7B-201ENST00000350033 IPO8O15397 1037 aaKnown RBP16.97■□□□□ 0.31
COPS7B-201ENST00000350033 TWISTNBQ3B726 338 aaPredicted RBP16.97■□□□□ 0.31
COPS7B-201ENST00000350033 CFAP44Q96MT7 982 aa16.97■□□□□ 0.31
COPS7B-201ENST00000350033 ZBTB40Q9NUA8 1239 aa16.97■□□□□ 0.31
COPS7B-201ENST00000350033 FOXO3O43524 673 aa16.97■□□□□ 0.31
COPS7B-201ENST00000350033 RIMS1Q86UR5 1692 aaKnown RBP16.96■□□□□ 0.31
COPS7B-201ENST00000350033 DDRGK1Q96HY6 314 aa16.96■□□□□ 0.31
COPS7B-201ENST00000350033 PTCH1Q13635 1447 aa16.96■□□□□ 0.31
COPS7B-201ENST00000350033 NALCNQ8IZF0 1738 aa16.96■□□□□ 0.31
COPS7B-201ENST00000350033 CALD1Q05682 793 aaKnown RBP16.96■□□□□ 0.3
COPS7B-201ENST00000350033 MIS18AQ9NYP9 233 aa16.95■□□□□ 0.3
COPS7B-201ENST00000350033 USP31Q70CQ4 1352 aa16.95■□□□□ 0.3
COPS7B-201ENST00000350033 LMOD3Q0VAK6 560 aa16.94■□□□□ 0.3
COPS7B-201ENST00000350033 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
COPS7B-201ENST00000350033 NLRP6P59044 892 aa16.93■□□□□ 0.3
COPS7B-201ENST00000350033 HDAC1Q13547 482 aaPredicted RBP16.93■□□□□ 0.3
COPS7B-201ENST00000350033 PIK3C2AO00443 1686 aa16.92■□□□□ 0.3
COPS7B-201ENST00000350033 CEP170BQ9Y4F5 1589 aaPredicted RBP16.92■□□□□ 0.3
COPS7B-201ENST00000350033 AMPHP49418 695 aa16.92■□□□□ 0.3
COPS7B-201ENST00000350033 TTC21AQ8NDW8 1320 aa16.91■□□□□ 0.3
COPS7B-201ENST00000350033 RGPD1P0DJD0 1748 aa16.91■□□□□ 0.3
COPS7B-201ENST00000350033 ZBTB7BO15156 539 aaPredicted RBP16.91■□□□□ 0.3
COPS7B-201ENST00000350033 C14orf37Q86TY3 774 aa16.91■□□□□ 0.3
COPS7B-201ENST00000350033 BRPF1P55201 1214 aaPredicted RBP16.9■□□□□ 0.3
COPS7B-201ENST00000350033 MTHFSDQ2M296 383 aaKnown RBP16.9■□□□□ 0.3
COPS7B-201ENST00000350033 FMN2Q9NZ56 1722 aa16.9■□□□□ 0.3
COPS7B-201ENST00000350033 LTV1Q96GA3 475 aaPredicted RBP16.9■□□□□ 0.3
COPS7B-201ENST00000350033 EYA1Q99502 592 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms